Mugil cephalus (flathead mullet): 124997563
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Entry
124997563 CDS
T08342
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124997563 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
124997563 (smarca4a)
03036 Chromosome and associated proteins [BR:
mcep03036
]
124997563 (smarca4a)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124997563 (smarca4a)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124997563 (smarca4a)
Chromatin remodeling factors
BAF complex
124997563 (smarca4a)
PBAF complex
124997563 (smarca4a)
GBAF(ncBAF) complex
124997563 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
124997563
NCBI-ProteinID:
XP_047427304
LinkDB
All DBs
Position
20:complement(7443408..7460000)
Genome browser
AA seq
1644 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKVMPDDPRYSQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPTGPGTGPMEGSGDPNQGMGQPNRGGPPQGPG
GPPVAAVGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQ
QPPMPNMPPSTGPGGGPGSVPGPAQANYNRPHGMVGPNMVPPGPAGVPPGMQGQPTNGPP
KSWPEGPMVNAATPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPP
MMLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATI
ELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERI
EKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAIQALKEKKK
KKKKKKPEPVEGGSAALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVEAPKAGQLEAW
LEMNPGYEVAPRSDSEDSGSEEDEDEEEDDEHPQPSSAPTEEKKKIPDPDCEDVSEVDVQ
HIIEHAKQDVDDEYGNAAFNRGLQSYYAVAHAVTEKVDKQSSLLINGQLKQYQIKGLEWL
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKW
APSVVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHR
MKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQR
VLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGY
SGGIVSGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLR
LDGTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQ
AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRA
FLQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRR
EEARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTE
KQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPSTPSSSSGRGRDKDEEVKKAKK
RGRPPAEKLSPNPPSLTKKMKKIVDAVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIR
KPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQ
KIEKDDESEGEESEEEEDDVDEGSESESRSVKVKIKLSRKEKGDRGGKGQRRRGRGARAK
PVVSDDDSDEEQEEERSASGSDDD
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccaatgggagggacacctcggcccggtccctccccaggccca
gggccatctccgggaggcatgatgggcccgagtccggggccctcgccaggctcagcccac
agtatgatggggcccagcccaggacctccggggtctggacacccccaccctccacaggga
ccctcaggatatcctcaggacaacatgcaccagatgcacaaaccaatggaagccatgcac
gagaaggtaatgcctgatgaccctcgctacagccagatgaagggcatgggcatgagacca
ggggggcacagtgggatgggaccccctccaagcccaatggatcaacattctcaaggctac
ccctctccactgggaggctcagaacacgcacccagccccgtcccagccaacggccccccc
tctggtcccatgatgcccggaggtcccactggtcccgggactggccctatggagggcagc
ggggatcctaatcagggtatgggccagccgaaccgcgggggtcccccccagggccccggc
ggaccccctgtcgcagcggtaggaccaggcggcgcaggtggacccactcctttcaaccag
aaccagttgcaccaactcagggcccagatcatggcctacaagatgctggcgcgcagtcag
ccgctaccagagcacttgcagatggctgtgcaggggaagaggcccatgccagggatgcag
cagccgccaatgcctaatatgccaccttccaccgggcctggaggtggaccagggtctgta
ccgggaccagctcaggcaaactacaatagaccacacggtatggtaggccccaatatggtt
cctcctgggcctgcaggagttcccccaggtatgcaagggcagccaaccaacggaccccct
aaatcgtggcctgaaggaccaatggtgaacgctgccactccatccaacccccctcagaag
ctcattccacctcaacccaccggcagaccgtctcctgctcctccctccgtgcccccggct
gcctccccggtgatgccccctcagacgcagtccccggggcagccggcgcagccgcctccc
atgatgctacaccaaaagcagaaccgcataacccccatccagaaacctcgcgggctggac
ccagtggagatcctccaggagagagaatacaggctacaggctcgtatcgctcaccgtatc
caggagctggagaatcttcccggctcgctggctggagacctgcgcaccaaggccaccatc
gagctcaaagccctgcggctgctcaacttccagagacagctgcgccaggaggtggtggtt
tgcatgcggcgcgataccgctttggaaacggccctcaacgctaaagcctacaagcgcagc
aaacggcagtctctgcgcgaggcccgcatcacggagaagctcgagaagcagcagaagatc
gaacaggagcggaaacgtcgccagaaacaccaggaatacctcaacagcatcctgcagcac
gccaaggacttcaaggagtaccaccgctccatcacagcgaagatccagaaggccaccaaa
gcggtcgccacgtatcacgccaacactgagcgcgagcagaagaaggagaatgagcgcatc
gagaaggagagaatgcggaggctgatggctgaagatgaggaaggttaccgtaaactcatc
gaccagaagaaagacaagcgtctggcctacctgctgcaacagacggacgagtacgtggcc
aacctcaccgagctggtgcgcgcccacaaagccatacaagctctcaaagagaagaagaag
aagaagaaaaagaagaagccagagcctgtggagggtggttctgctgctctgggacctgat
ggagagcctttggacgagaccagtcaaatgagtgacctgccggtcaaggtgatccacgtg
gacagtggaaagatcctgacgggcgttgaggcccccaaggctggccagctggaggcctgg
ctggaaatgaacccaggatacgaggtagcgccgcgctccgacagcgaagacagcggctcg
gaggaggacgaggacgaggaggaagacgacgagcatcctcagccttcttcagctccaaca
gaggagaagaagaagatccctgaccccgactgcgaagacgtgtccgaagtggatgtccag
cacatcattgaacacgccaagcaggacgtagacgacgagtacggcaacgcggccttcaac
cgaggcctgcagtcctactacgccgtggctcacgccgtcaccgaaaaagtggacaaacag
tcctcactgctgatcaacgggcagctcaagcaataccagattaaaggtctggagtggctg
gtgtcactttacaacaacaacttgaacggcatcctggctgatgagatgggtctgggaaaa
accatccagaccatcgccctcatcacttacctcatggagtacaagcgcctcaacgggccc
ttcctcatcattgtacctctctcaactttatcaaattgggtgtatgagtttgataagtgg
gctccatctgtcgtgaaggtctcctacaaggggtctccagctgctcgtcgagccttcgtc
cccatcctgcgcagcggcaagttcaacgtgctgctcaccacctacgagtacatcatcaaa
gataagcaagtgctggcaaagctccgttggaagtacatgattgtggacgagggtcaccgc
atgaagaaccaccactgtaagctgacccaggtcctgaacacacactacctggccccgcgc
cgcctgctgctcacggggaccccgctgcagaacaagctccccgagctctgggccctgctc
aacttcctgctgcccaccatcttcaagagctgcagcaccttcgaacagtggttcaacgct
ccgttcgccatgaccggggagaaggttgacctgaacgaagaagagaccatcctgatcatt
cgacgtttacacaaggtgctccggcctttcctgctgcgccgactcaagaaagaagtggag
gctcagctcccagagaaggtggagtatgtgataaagtgcgacatgtcggccctgcagaga
gttttgtacagacacatgcaggcaaagggagtcctgctcacagacggttcagaaaaagac
aagaagggtaaaggtggcacgaagaccctgatgaacactatcatgcaactgaggaagatt
tgcaaccacccctacatgttccaacacatcgaggaatctttctctgagcatcttggttat
tctggcgggatcgtgtcgggccctgacctctaccgctcctctggaaagtttgagctgctg
gatcgtatcctgcccaagctgagggccaccaaccacaaagtgctgctcttctgtcaaatg
acctcactcatgaccatcatggaggactacttcgcgtaccgcaacttcaagtatctgcgt
ctggacggaaccaccaaagccgaggaccgtggtatgctgctgaagacgttcaacgacccg
gcctccgagtactttgtgttcctgctcagtaccagggccggaggtctgggtctgaacctg
cagtctgccgacactgtcatcattttcgacagcgactggaaccctcatcaggacttgcag
gcccaggacagagctcaccgaatcggccagcagaacgaggtgcgcgtcctccgcctgtgc
accgtcaacagcgtggaggaaaagatcctggccgccgccaagtacaagctgaacgtggac
cagaaagtcatccaggccggcatgttcgaccagaagtcctccggctatgagcgccgggcc
ttcttgcaggccattctggagcacgaggaacaggatgaggtcggggctcgtggaggctgc
cgcactaggggggcgtgggaggaggacgaggtccccgatgacgagactgtcaatcagatg
attgccagaagtgaagaggagtttgaacagttcatgcgcatggatctggacagacgccgc
gaggaggcccgcaaccctaagaggaaaccccgtctgatggaggaggacgacatgccgtcc
tggatcctgaaggacgacgccgaggtggagaggctaacctgcgaggaggaggaggagaag
atgttcggccgagggtctcgccagcgcaaggaggtggactacagcgactcgctcaccgag
aagcagtggctcaaggccatagaagaaggcaacctggaggacatcgaggaggaggtgcgc
cacaaaaagacgaccaggaagcgcaagagggaccgcgaccacgacggcggcccgtccacg
cccagctccagcagcggccgcgggcgggacaaagacgaggaggtgaagaaggccaagaaa
cgagggcgcccgcccgcggagaagctctcgccgaaccctccgtccctcacgaagaagatg
aagaagatcgtcgacgccgtcatcaaatacaaggacggcagcaatggtcgacagctgagt
gaagtcttcattcagcttccctctcgtaaggagctgccggaatactacgagctcatccgc
aaaccagtggacttcaggaagatcaaggagaggatccgcagccataaataccgcagcctg
aacgacctggagaaggacgtgatgctgctgtgtcagaatgcccagaccttcaacctggag
ggctccctgatctacgaggactccatcgtgctccagtccgtcttcacgagtgtgcggcag
aagatcgagaaggacgacgagagcgagggcgaggagagcgaagaggaggaggacgacgtg
gacgaaggctccgagtccgaatctcgctcggtgaaggtgaagattaagctgagccgcaaa
gagaagggggatcgaggaggaaagggacagcggcgaagaggacgcggcgcccgggctaaa
cccgtggtgagcgacgacgacagcgatgaggaacaggaagaggagcgctcggccagcggc
agcgacgacgactga
DBGET
integrated database retrieval system
