Mugil cephalus (flathead mullet): 124997601
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Entry
124997601 CDS
T08342
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04120
Ubiquitin mediated proteolysis
mcep04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124997601 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124997601 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
124997601 (mgrn1b)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124997601 (mgrn1b)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124997601 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124997601
NCBI-ProteinID:
XP_047427382
LinkDB
All DBs
Position
20:complement(15794340..15801665)
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AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPLLASETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPPIPSVPLYDEINFSGGLGGDNRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgcagaatcgctggggttgaggacatcgatatccaggccaac
tcggcctatcgattcccacctaaatctgggaattactttgccagccacttcttcatggga
ggagagaaattcgacacaccacatccagaaggataccttttcggggaaaacatggacttg
aattttctcggaaataggccagtgcagtttccgtatgtgacgcctgcgccccatgagcct
gtgaaaaccctgaggagtctggtcaacatcagaaaggactctctgcgtttggtcaggtat
aaagatgactctgacacaccagtggaggacggtggcaaaccaaaagtccagtatggtgtg
gagttcacctttgacgctgatgctcgggtggccatcaccctctactgccaggcctttgag
gagttctccaacgggatggctgtgtacagtccaaaggatccattattggcctctgaaact
gtgcattacaagcggggggtgagccaacagttctccatgccgtcttttaaaattgacttc
agcgagtggaaagaggaggatctgaactttgacctcgaccgaggagtgtttcctatggtg
atccaagctgtggttgatgaaggggacgattgccttggacatgcccatgtactactggca
gcctttgaaagacacgttgatggcagtttctctgtgaagcccctgaagcagaagcaaatt
gtggatcgtgtgagctacctcttacaagagatctatgggattgagaacaaaaacaaccaa
gaaaccaagccatccgatgacgaaaacagtgacaacagcaacgagtgtgttgtgtgtttg
tcggacctgcgagacacactcatcctgccctgcagacatttgtgtctctgcaactcctgt
gcagacacgctgcgttaccaggccaacaactgtcccatctgcaggctgcccttcagagct
ttgctgcagatcagagctgtgaggaaaaagcctggtgctctttctcccgtgtccttcagt
cccgttctggctcagactatggaccacgacgagcactcgagctctgactcggttcctcct
ggctttgaacctatctcgctgttggaggctctgaacggtctgcggtcggtttcccccccc
atcccgtctgtccccctctatgatgaaatcaacttctcggggggtctggggggtgacaac
agacagctgagctccccagagcatttgagcgatggaagcctgcagaaaggcaaagtcagc
aagtcacccgacagcaccctcagatctccatcgtctcccatccaggaggaggatgaggag
aagctgtcggagatgtcagatgctcagccgcacacgatgctgtccagcagccccgccccc
acagacgccacagcgaccgaggatgtggcagaatccctttctccagatgacgaggacagg
atgcactctggaggagacatcctgcaggactgcagcagtgaacacagcagcttgaccaaa
acggagagcgacccgccgggtgacctgtctctgccaggttcttcggagtcgacagaaagc
ctgaaaagtcagagcacaaactgctccagccagcctctcctgtgtcctacgagcagcctt
cacatggaagatgaacacctcaacccgtga
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