Mugil cephalus (flathead mullet): 124997782
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Entry
124997782 CDS
T08342
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124997782 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
124997782 (exosc10)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
124997782 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
124997782
NCBI-ProteinID:
XP_047427734
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All DBs
Position
1:complement(18953602..18963680)
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AA seq
894 aa
AA seq
DB search
MKPSKSEDSTRSGLQEGNSDTNDEDKSELCPGFKDVDSFVKYGLGAVLSATKASAGLPQP
GDEYDFYRSFPGFQEFCESQGDRLLHCMSQIMQHHGCRSHTRDRNKLTGLEERFDLIVDS
NDVILERAGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGSGSSSRSETFRLLHAK
NITRPQLKFKEKVDNSNTPFTPKIFIKPNATKPLPSYFTNKQIRSERPEDLDVPAALADF
IHQQRMQELVEDMFAHPYQYELDHLSMPERLLSKPEPQMYKPVAETKLSFIDSLEDLVAL
NEKLCKLSEFAVDLEHHSYRSFLGLTCLMQISTREEDFIIDTLELRSELYILNEAFTDPN
IVKVFHGADSDMEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHFCNVDSDKRYQ
LADWRIRPLPDEMVQYARTDTHYLLYIYDCVRAQLLDSNHGQPGLLQSVWNKSKDISLKK
YLKPIFTEESYLELQRKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGFVLPTHMMCKI
SEELPKEPQGIIACCNPVPPLVRQHVNELHLLVQQAREMPLLKAEIAAQKTKGLTPIKKP
EVMLFGPHDTSRVSESDLPPFSAEEVPVKQGVLFSEDEHKMDTDVQTTTTSGLLAPAKIT
LFQELEKKDAEESDSVAHMKAKRINESFENPFRMYLPSSDVHISKNAKFDPSSKIFEISK
RWKLQSIEQQQTELEAKKKAKQEAKEQAKKESEERNKAKQSYQESLQNVATVRQQAAEST
KDGGKKRERVVSEAGELTPKPSKKLMKSAEKPQKTEAPPQDSFKPFDYSQSDFKVFTGAN
SRDNTQFDPNRQSHDFKKKRTPRGQKNNVGAGNRSMSYLSGKSERGFRHNWPKR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccctctaagagtgaagattccacgaggagtgggctccaagaggggaattcagac
acgaacgacgaggacaaaagtgaactgtgtcccggatttaaagacgtggactcatttgtt
aaatatggactgggtgctgtgttatcagccaccaaagcatccgctggcttacctcaaccc
ggggatgaatacgacttctacagaagcttcccgggcttccaggagttctgtgaaagtcaa
ggagataggctcttacactgcatgagccagataatgcagcatcacggctgcaggtcccac
acgagagacaggaacaagctgacggggctggaggagaggttcgacttgattgtcgactca
aatgacgtcatcctggaacgcgcgggcattctcctcgatgaagccgatggggtgaacagg
agccagcagcctgtcatgcccgcagggtttcaacctccaaaaattgtcgtttccagctgg
aatcgcaagggttccggctctagcagtcgttcagagactttccggctgctccacgctaaa
aatatcaccaggcctcagctgaaattcaaggaaaaagtcgacaacagcaacacacctttc
acgcccaagatcttcatcaagcctaatgctacgaagccacttccgtcttatttcaccaac
aaacaaatccgttcagagagacctgaagatcttgacgtcccggccgctctggcagacttc
attcaccagcagagaatgcaggaactcgttgaagacatgtttgctcacccgtaccaatac
gaactggaccatctttcaatgccagaaaggcttctgtctaagcccgagcctcagatgtac
aaaccagttgcagagacaaagttgtccttcattgactcactggaagatctggtagctctc
aatgagaagctttgcaagttgtctgaatttgcagtggacctcgagcaccattcctaccgg
agtttcctcggcctcacgtgtctgatgcagatctccaccagagaggaggacttcatcatc
gacaccttggagctccgcagcgagttgtacatcctgaacgaggctttcaccgaccccaat
atcgtcaaggttttccacggcgctgactccgacatggagtggctccagagggacttcggc
ttgtatgtcgtcaaccttttcgacacgcatcaagcgagtcgagcgctcaacctggccaga
cattccctggaccacttgctcaaacacttctgcaacgtggactcagacaaacgttaccag
ctggcagattggagaattcgccccttgccagatgagatggtccagtacgcgcgcacagac
acccactacctcctctacatctacgactgtgttagagcacagctgttggactctaaccac
gggcaacctggcctgctgcagagcgtctggaacaagagcaaagacatttccctgaagaaa
tatctgaagccaatattcacagaggagtcatatttggagctgcagaggaagcagaaaaag
tcttttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaagctg
gccaggcaggaagacgaaagcaccggattcgtccttcccactcatatgatgtgcaaaata
tcagaggagcttcccaaagagcctcagggcatcatcgcctgctgtaaccccgtgcctccc
ctcgtgcggcagcatgtcaatgagcttcatctgttggtgcagcaggccagggagatgccc
ctccttaaggccgagattgcagcgcaaaagacgaaaggactcacacccataaaaaagcca
gaggtcatgctgttcggtcctcatgatacatccagggtttctgaaagcgacctccctccc
ttttctgcagaagaggtcccagttaaacaaggagtgctcttctcagaggacgaacataaa
atggacactgacgttcagacgacgacgacgagcggtctcctggcaccggctaaaatcact
ctgtttcaggagctggaaaagaaggacgctgaagagtcggactccgtggctcacatgaag
gccaagcgtatcaatgagtcttttgaaaatcctttcaggatgtacttaccctccagtgac
gtgcacatcagcaagaacgccaagtttgacccgtcttcaaaaatatttgagatcagcaaa
agatggaaactgcagagtattgaacaacaacagacggagctggaggccaagaagaaagcc
aagcaggaagcgaaggaacaggcgaagaaggagtcagaggaaagaaacaaggctaagcag
agctaccaggagtctctgcagaacgttgccaccgttcgccaacaagcagcggaatccaca
aaagatggaggaaagaaaagggagagggttgtgagtgaagccggagagttgactcccaaa
ccaagtaagaagctgatgaaatctgcagagaagccccagaagacagaagcgcctccacaa
gacagcttcaagcccttcgactacagtcagtcagacttcaaagtcttcactggtgccaat
tcaagggacaatacgcagtttgatcctaaccggcaatcgcatgattttaagaaaaagaga
actcccagaggacaaaagaacaacgttggagctggaaaccgaagtatgtcgtacctgagt
ggaaaatctgagagaggattccgacacaactggcccaaaagatag
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