Mugil cephalus (flathead mullet): 124998289
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Entry
124998289 CDS
T08342
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124998289 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
124998289 (lrrc4ba)
Cell adhesion molecules [BR:
mcep04515
]
Immunoglobulin superfamily
NGL family
124998289 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
124998289
NCBI-ProteinID:
XP_047428520
LinkDB
All DBs
Position
20:19779286..19815301
Genome browser
AA seq
733 aa
AA seq
DB search
MRIATLTCLSGPSPFLFLLAQLLLRLLLSGPELVGAASSCPSHCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETGGGNDYALVAINETFISVHPGP
TPSDLWPNGVPTTDSSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVTQ
GGTSGIGGGQSHRLHHPEIVNLPNLARSEHINHYYKTHHFNNNMMSLGLGTGSGVGLNNN
NNPSPCSQSQNISCSQVPTSTCGGPTSSGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgcctttccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctctctgggccggagttagtgggagccgcgtcctcctgc
ccctcccattgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gaggaagtgcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactca
atacaggttatcaagtcagatactttcaagcacttgaggcaccttgaaatcctacagctc
tccaagaatcagatacgtcagattgaagttggagctttcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccctattgagactctgccaggctatgcc
ttccaccgcgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atttctgatgcggcttttgtgggcctcattaatctacggtacctgaatttgggcatgtgt
gggctgaaagacattcccaagcttacagcacttgtgcgtttagaggaactggagctgtca
ggaaaccgtctggagataatccgtcctggttccttccaaggcctggtgtctcttcgcaag
ctgtggctaatgcactcacaagtttcagttattgagcgtaatgcttttgatgacctgaaa
aacctggaagagctcaacctgtcccataattccttgcactccttgccccatgatcttttc
acacctcttcaccaactggagagggtgcatctgaatcacaatccctgggtgtgcaactgt
gatgttctttggcttagttggtggttgaaggagacggtgcccagcaacacaacttgttgt
gcccgctgccatgctccccccttcttaaagggcaagtacattggagagcttgaccagagc
cactttacctgctatgcacctgtcattgtggaaccacctacagacctcaatgtcactgag
ggtatggcggctgagcttaagtgtcgcacaagcacttccacaacatctgtcaactggatc
acccctaatggcactctaatgacccacggttcttaccgggtgaggatatccgttctacat
gatggcacactcaacttcacaaatgtcaccctgcgagacactggccaatacacctgcatg
gtcacgaatgctgctggtaatactacagcaactgctgtcctcaatgttacagctgctgat
gcaagtgtaaactatacctactttacaacagttactgtagaaactgtggagactggcgga
ggaaacgattatgcattggtcgccatcaatgagaccttcattagtgtccaccctggcccc
actccctctgatttgtggccaaatggtgttcctactacagactcctctctatctgctggc
tggtcctcctcctctccccgggccactcgacccaccttcactgtgcccatcactgaacca
ggcttctcaggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttcgta
gccattaccttcatggcagcagtgatgcttgtggtgttctacaagctgaggaagcagcac
cagctgcataaacaccatggccctgctcgtgccattgagatcatcaatgtggaggatgag
cttggtgctggggccagtggtagaggcagtggcatctcaggaggctccaccgtgacacaa
ggcggaaccagtggaataggagggggccagagccacaggctacatcacccggagatagtc
aacctgccaaacctggcacgatcagagcacatcaaccactactataaaacccatcacttc
aacaacaacatgatgagcctgggcttgggcacaggttcaggtgttggcctcaacaacaac
aacaatccctcaccatgctctcagtcacagaacatatcctgttcccaggttccaacctcc
acttgcgggggaccaacctcaagtggcaccctgccctctcctgtgcccctaccccagctg
ggtctccacagttctctgaaaggcctaatgggaaaaggccagaatgagccactacttttt
aagagtggctcaaaggaaaacgtgcaggagactcaaatctga
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