Mugil cephalus (flathead mullet): 124998355
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Entry
124998355 CDS
T08342
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03440
Homologous recombination
mcep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124998355 (top3a)
03460 Fanconi anemia pathway
124998355 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
124998355 (top3a)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
124998355 (top3a)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124998355 (top3a)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Topoisomerases
124998355 (top3a)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124998355 (top3a)
FA (Fanconi anemia) pathway
124998355 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
124998355
NCBI-ProteinID:
XP_047428645
LinkDB
All DBs
Position
20:3376789..3394973
Genome browser
AA seq
1036 aa
AA seq
DB search
MLVLLLRRASLLLTGPHRLSGQRRWFCAAESALWPDTQQQQQEEAEMIRNRAQIKRVLCV
AEKNDAAKGISEIMSGGRARRREGLSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGLEFK
APFQKWHSCNPVLLFDAEVEKYCPDNMTQIKRTLEKEARQCQALVIWTDCDREGENIGFE
IIDVCKAVKPNLQVFRAKFSEITPNSIRRACETLTEPDANVSDAVDVRQELDLRIGASFT
RFQTLRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEED
AVEFSWKRNRLFNHTACLVLYQICMEDPMATVTSVTSKPKSKWRPLPLDTVELEKLASRK
LRINAKETMKIAEKLYTQGFISYPRTETNIFPASLALGPLVEQQTQSPVWGTFAQRVLEQ
PGGPNPRQGKNSDQAHPPIHPTKFSNTLQGNEGRLYEFIVRHFLACVSQDALGHETVVDI
DIAQEKFSTSGLMIIARNYLDVYPYDRWSAKVIPVYEQNSQFQPTAIEMVDGQTSPPQLL
TEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYE
MSKPNLRSELEADLKLVSEGRKDKRSVLQHHIQKYKTVFIESVRKAKKLDEALTPYLGAA
HDVPEAEQQDMDIPLPVRKCPQCGRDMVLKKKREGNSKYLSCVGYPACKTAVWFPDMVLD
VNRDDSVCPSCQPSPIHMLKFKFRRGSVPPMVPLEFVGCIGGCDEMLREVLDLKYLRGPG
GGGGGVGGGGGRRGDDPPAPRPPRPEPRRTPGSLPRPSLPPVPSWTPEPRPPPSGGTGGD
VIVCNCGQEGLLLTVRKDGPNQGRQFYKCNSGSCNFFLWADQPSQREAAPPPPSRGPPAP
RASQPPRASLGYTNTFGGGRGQEVGSGGHAGGHEVMCNCNEAAVMRTVQKDGPNKGRMFH
TCGKPREQQCGFFQWADENVPPPGDFGGGFNGGGDRGRKGRMITGDANNKPSNPRKPRTC
GICHMPGHTRVTCPQR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgctgctcctccggagagcgtccttacttttaaccggtcctcatcggctcagc
ggccagcggaggtggttctgtgcggcggagagtgccctttggccggacacgcagcagcag
cagcaggaggaggctgagatgatccggaaccgggcgcagattaagcgggtcctgtgtgtg
gccgagaagaacgatgcagccaaaggcatcagcgagatcatgtccggcggcagagccagg
aggagggagggactgtcaaagtttaataaaatctacgagtatgaatatcatctcttcggt
cagaacgtgacggtaacaatgacgtcggtatccggtcatttactgggtctggagtttaaa
gccccgttccagaaatggcacagctgtaatcctgtgctgctgtttgatgcagaggtggag
aagtattgtccagataacatgacgcagatcaagcggacgctggagaaggaggcgaggcag
tgccaggcgttggtcatctggaccgactgcgacagggagggagaaaacatcggctttgaa
atcatagacgtttgtaaagcagtgaagcccaatttacaagtctttcgtgcaaagttttct
gagatcacccccaactcgatccggagagcctgtgagacgctgacggagccggacgctaac
gtcagcgacgctgtcgacgtccgccaggaactggacctgagaataggtgcgtccttcact
cgcttccagacgcttcggctgcagaagatctttcccgagtctctggccaatcagctgatc
tcctacggcagctgtcagttccccacgctgggcttcgtggtggagcgcttcaaagccatc
caggcgtttatacccgagaccttctacaagattaaagtgctccatgaggtggaggaggac
gccgtggagttcagctggaaaagaaaccgtctcttcaaccacacggcttgtttggtgctt
taccagatctgcatggaggatcccatggcaacagtcacctcagtaaccagcaaacccaag
agtaaatggaggccgctgcctctggacactgtggaactggagaagctggcgtctcgtaag
ttgagaataaacgccaaagagaccatgaaaattgcggaaaagctctatactcaaggattt
atcagctaccctcgcacggagaccaacattttccccgctagcctggcgctcggccccctg
gtggagcagcagactcaaagcccggtctgggggacgtttgcccaacgggttcttgagcag
ccggggggtcctaacccacggcagggcaagaactctgaccaagcccaccctcccatacac
cccacaaagttctccaacacactgcagggaaacgaaggacgtttgtacgagttcattgtc
cgacacttcctggcttgcgtatcccaggatgctttggggcatgagacggtggtggacata
gacatcgctcaggagaagttctccacgtcggggctcatgatcatcgcgaggaactacctg
gacgtttacccctacgaccggtggagcgccaaggtgattccagtgtatgaacagaactcc
cagttccagccgacggccatcgagatggtggacggacagacgagtcctcctcagctgctc
accgaggccgacctcatttcactgatggagaaacacggcatcggtacggacgccacccac
gcggatcacatcgagacgataaagagtcgcatgtacgtgggtttgacggccgaccagagg
tttctaccgggggagctcggcatgggactggtggaaggttataactcgatgggctacgag
atgtcgaagccgaacctccgctctgaactggaggcggatctgaagctggtgtctgaaggc
aggaaggacaaacgcagcgtcctgcagcatcacatccagaaatacaagaccgtcttcata
gagtctgtgaggaaggcgaagaagttagatgaagccctgacgccgtatctgggtgcagct
cacgacgtccctgaggcggagcagcaggacatggacatccctctaccggtgaggaagtgt
cctcagtgtggacgggacatggtgctgaagaagaagagggagggaaacagtaagtacctg
tcctgtgtgggctacccggcctgtaagacggccgtgtggttccctgacatggtgctggac
gtcaacagagacgacagcgtttgtcccagctgtcaaccgagccccattcacatgttgaag
ttcaagttccgacggggcagcgtccctcccatggtgcctctggaatttgttggctgcatt
ggcggctgtgacgagatgctaagggaggtgctggacctgaaatacctccgggggcctgga
ggtggtggtggtggtgttggaggaggaggaggaagaagaggagatgacccaccagctcca
aggccgccgagaccagagccacgtagaaccccgggttcccttcctcgcccttcccttcct
cccgtcccctcctggactccggagccaagacctccaccgagtggaggcaccgggggtgac
gtgattgtttgtaactgtggtcaggaaggcctcctcctcaccgtacgcaaggacggaccc
aaccaaggtcgccagttctacaaatgcaactctggaagctgcaacttcttcctgtgggcg
gatcagccgagtcaacgggaggcggcgccgccgccgccgagtcgaggtcctccagcaccg
agagcttcccagcctccgagagcctctctggggtacacgaacacatttggaggaggtaga
ggacaggaagtgggctcgggaggacacgcgggaggacacgaggtgatgtgcaactgcaac
gaggcagcggtgatgaggacggtgcagaaggacggaccgaacaaaggacgaatgttccac
acctgtgggaaacccagagagcagcagtgtgggttcttccagtgggctgatgagaacgta
cctccaccaggtgactttggaggtggatttaatggcggaggagacagagggaggaagggg
aggatgatcacgggtgacgccaacaacaaaccctccaatcccaggaaacctcgaacctgc
ggcatctgccacatgccgggacacacccgagtcacctgccctcagcgctga
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