Mugil cephalus (flathead mullet): 124998632
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Entry
124998632 CDS
T08342
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
124998632 (prdm1c)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124998632 (prdm1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
124998632
NCBI-ProteinID:
XP_047429017
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Position
21:7003490..7011996
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AA seq
778 aa
AA seq
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MCGSFQGFTASDCTMLTSERSPQSTGVATAAASGTLGADMASWMEADFEEKCTYIVKDQP
LEEESENHGRRRAERSLPRNLALKRCHSSKEVLGVTSKELIPKGTRFGPLVGEIYTNETL
LKDANRKYFWRVFLDGRLHHILDGLREERSNWMRYVNPACSVEEQNLVACQSGLEIFFYT
IKPLQPGQELLVWYCSEFAQRCNYPPLGQLAIDHSEPSQAQEKTAGKRGHTVSEILQDEP
PQSSSAHHRRLEGPLSQTNAVFPLCPRVVYPIQPVSESISGRRYAPLPPLPSCSPPAAKR
PALSSPAPTSLHFPFQHSRGPVMDKPYQEPSLPDRVHPSLRHNPYLLSHYSLGLLPHSYP
FYSDRLKPPFTLPSHLLPVDSYAHFLHPLASGCKDLTPSSSKQDLRLSLSGEHKDSHLTS
RRTNYLRIASNDFRDFKHSPGSNIHADFTVPATSTASPMVTELCGAMPSLAPGGCSPPVG
MAASSDCFPSKPTSATQSNTENAMDLRKTKCGGSTIGYKTLSYPLMRQNGKIRYECNICG
KVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHECKVCHKRFS
STSNLKTHQRLHSGERPYQCKLCPARFTQFIHLKLHKRLHSGERPHRCPRCPCAYLNYCS
LQVHLQGFCPLSPSASHRYSPEELHRVNSEIERFDISEAAEQLEAMAAEVEMDKGNVIDL
IQKLESHVSGHRDGARGETELSRYKPAKECSGFQPHHGSPLPLRPTSIKLESGCISEP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctccttccaaggcttcacagcctccgactgcaccatgttaacctcagaaagg
tcaccacagagcacgggggtcgctaccgcagccgcgtctgggacacttggcgcggacatg
gcgtcgtggatggaggccgacttcgaggagaagtgcacatacatcgtgaaggaccagcct
ctggaagaggagtccgaaaaccacggcaggagacgggccgagaggtccctgcccagaaac
ctggccctgaaacgctgccacagctcgaaagaggtgcttggcgtgaccagcaaggagctg
attcccaaggggacccgtttcggccctttggtgggcgagatctacaccaacgaaaccctg
ctgaaagacgccaacagaaagtacttctggagggtcttcctggatgggcgcttgcaccac
atcctggatggtttgagagaagagcggagcaactggatgcgctatgtcaacccggcgtgc
agcgtcgaggagcagaacctggtcgcgtgccagagcggcctggagatcttcttctacact
atcaaaccgcttcagccgggccaggagctcctggtgtggtactgctccgaattcgcccag
cgatgtaactaccctccgctgggccaactggccattgatcattctgagccgagtcaggca
caggagaagaccgcggggaaacgaggacacaccgtctctgaaatcctccaagacgagcca
ccccagtcctcatctgcccaccacagacgtctggagggtcctttgtctcagactaatgcg
gttttcccgttgtgtccccgcgtcgtctacccgatccagccagtctcagaatccatcagc
ggccgcagatatgcccccctgcctcctttgccatcctgcagccccccagctgctaaaaga
ccagcactaagtagccccgcccccactagtttgcacttcccctttcagcacagtcgaggt
cctgtcatggacaagccttaccaagagccctccttgcccgaccgtgttcatccttctttg
aggcacaacccctacctactgtctcactactcccttggccttctacctcattcgtatcca
ttctacagtgatcgactgaaacctcccttcaccctcccatcccatttactgccggttgac
agctatgcacacttcctacatcctttggccagcgggtgcaaagacttaacaccatccagt
tccaagcaggacctccgcctttcactgagcggtgagcacaaagacagtcacctcacatcc
agaaggacaaactacctcaggattgcctcgaatgactttagagatttcaaacactctcct
ggcagcaatattcacgcagacttcaccgtgcccgccacatccaccgcctcgccgatggta
actgagctctgcggagcaatgccgtcccttgcacctgggggatgctcaccgccggtgggc
atggctgcctcctccgactgcttcccttccaaacctacctctgccacccagagcaatacg
gagaacgcaatggacctcaggaagaccaaatgtggagggagcaccattggctacaagacc
ctgtcataccctctcatgaggcagaatgggaagatccggtatgagtgcaacatctgcggg
aaggtctttgggcagctgtccaacctcaaggttcatctgagagtacacagcggtgagcgt
cccttcaggtgtcagacctgcaacaagaacttcactcagctggcgcacctgcagaaacac
tacctagttcacacgggagagaaaccccatgaatgcaaggtgtgccataagcgattcagc
agcactagtaacttgaagacccaccagcgactacactcaggtgagaggccttaccaatgc
aagctctgcccggcccggtttactcagttcatccacctcaagctccacaaacgcctccac
agtggggagcgaccgcaccgctgtcctcgctgcccgtgcgcctatctcaactactgcagc
ctgcaggtgcacctccaaggcttctgcccactctccccctctgcctcccacagatactcg
ccagaggagctacatcgggtgaactcagagatcgagaggtttgacatcagcgaggcagca
gagcagctggaagccatggctgcagaggtcgagatggacaaggggaatgttatcgacctg
atacagaagttagagtctcatgtttcgggccaccgggacggtgcaagaggggagactgag
ctgagccgctacaaaccggccaaggagtgttctggttttcagccacaccatggcagccct
ctacctctgcgtccaaccagcatcaagctggagtcaggctgcatttcagagccctaa
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