Mugil cephalus (flathead mullet): 124998798
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Entry
124998798 CDS
T08342
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124998798 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
124998798 (hbs1l)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124998798 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
124998798
NCBI-ProteinID:
XP_047429305
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Position
21:complement(11118066..11138524)
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AA seq
725 aa
AA seq
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MSRHRNVRGYNYDEDFDDDDMYGQSVEDDCCISPATANQFIYSRQGKQAPKEEPLEEEEY
EDEDVPMSPTVNHNLDPLDQAKLYSCLDQMRTVLGDAVPDSVLNQAAIRCGFDPQKALDA
VLSEDTKTAPVARSTTEEMASVVKVSQEKAPLPQRTKQEAEKGACLAASHTDITSKAHKP
EAEGHKSKGRDASHNKLDSEVVPKVARMTVSGKKQTMGFDVPSSGENGVAAASARRGGSP
ENAASAPATEAPSKRPETPSKGSNGEEASAAAPTPGRSSGKARQAINIKAELEKRQGGKP
LLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEE
RDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAG
FEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQERFQEIISKLGHFLKQAGFKDSDV
FYIPTSGLSGENLTTKSTVSQLTSWYSGFSLLEQIDAFKAPKRSVDKPFRLCVSDVFKDQ
GSGFCVTGKIEAGYIQTGEKILAMPPNETCTVKGITLHDEALDWAAAGDHVNLTVTGMDI
IKINVGCVFCDPKEPIRACTRFKARILLFNIEIPITQGFPVLLHYQTVSEPATIKKLISV
LHKSSGEVLKKKPKCLSKGMNAVVEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVV
TEIKA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcggggttacaactacgacgaagactttgatgatgatgac
atgtatggacagtccgtggaagatgactgctgtatatcaccagccacagcgaatcagttc
atctactcacgtcaagggaagcaagcaccaaaagaggagccattagaggaggaagaatac
gaagatgaggatgttcctatgtctcctactgtcaaccacaaccttgaccctcttgatcaa
gccaagttgtattcctgtctggaccaaatgcggactgtgctgggggatgcagttccagat
tctgtccttaatcaggctgcgatcagatgtggattcgacccacagaaggcactggatgcc
gtactgtctgaagacactaaaacagccccagttgccagaagtacaactgaagagatggct
tcggtcgtgaaagttagccaggagaaagcaccgcttccacaaagaaccaaacaggaggct
gagaaaggagcctgcttggctgcttctcacacagacattacgtccaaagcacataaacct
gaggcagaaggacacaaatctaaaggcagagatgcatcccacaataaactggactctgaa
gtggtacccaaagtggcacgaatgactgtctctggcaagaagcagacaatgggctttgac
gtccccagctcaggggagaacggcgttgctgccgcttcggcacgccgaggtggcagcccc
gaaaatgccgcctcggcgcctgccacggaggccccctccaaacgtcccgagacgccatcc
aaagggtcaaacggagaagaggcgtcggcggcggctcccaccccgggacgctcctccggg
aaggcgaggcaggcgatcaatatcaaggccgagctggagaagaggcaggggggcaaacct
ctgttaaacttggtagtgataggccatgtcgatgcaggtaagagcacacttatgggccac
ctgctttatctgctcggcaacgttaacaagcgcaccatgcacaagtatgagcaggagtcg
aagaaggcgggaaaagcctcctttgcctatgcttgggtcctggatgagactggcgaggag
agagacagaggtgtgacaatggatgtgggcatgactaagtttgagacaaactctaaagtg
gtgactctgatggatgccccgggacacaaagacttcattcccaacatgatcacaggagct
gcacaggccgatgtggccgtgctcgtggtggatgccagcagaggggagttcgaggcgggc
ttcgaagcaggcggtcagaccagagagcatgccttgctggtgcgttcgcttggtgtgact
cagctggccgtagccgtcaacaagatggaccaggtaaactggcagcaagagcgttttcaa
gaaatcatctcaaaactcggacattttctcaagcaggctggattcaaggactctgacgtt
ttctacatccccaccagcggcctgtcaggtgaaaacctcaccaccaagagcacggtgtca
cagctcacctcttggtactctgggttcagcctgctggagcagattgatgcatttaaagct
cctaagaggtccgtggacaaacctttcagactgtgtgtctcggatgtgttcaaagaccag
ggttcaggcttctgtgtcacagggaagattgaggctggttatattcagacaggagaaaaa
atactagcaatgcctcccaatgaaacctgcactgttaaagggataactctacatgatgag
gctttggactgggctgcagctggagaccacgtcaacctgaccgtcaccggcatggacata
atcaagatcaatgttggctgtgtgttctgtgatcccaaggagccaattcgcgcttgcacc
cgattcaaagctcgaatcctcctcttcaacattgagatccccatcacgcaaggcttccct
gttttgctgcattaccagacagtcagcgagccggcaaccattaagaaactaattagcgtt
ctgcacaaaagcagcggcgaggtcctcaagaagaagccaaagtgtttgagtaaaggcatg
aatgcggttgtggagatccagactcagaggcccgtgtcgttagagctgtacaaggactac
aaggaactgggccgcttcatgctgcgatacgtcggctccaccatcgccgcgggggttgtc
actgagatcaaagcgtga
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