Mugil cephalus (flathead mullet): 124998934
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Entry
124998934 CDS
T08342
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
mcep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124998934 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124998934 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
124998934 (srsf5b)
Spliceosome [BR:
mcep03041
]
Common components
Common spliceosomal components
SR proteins
124998934 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
124998934
NCBI-ProteinID:
XP_047429539
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All DBs
Position
21:4200364..4206119
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AA seq
295 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGSGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIV
ENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEINGR
KIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSGSPGGG
NSSPNPKSKDAAKRSSKMSKSATPPSPPPAQRASMSRSRSRSRSRSRSPSTDSQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtattttcatcggccggctcagtccctcggccagagagaaggatgtg
gagaggttcttcaagggatacggccgcatccgagacattgacctgaagaggggctttggt
tttgtggagttcgacgaccccagagacgcagaagacgccgtctatgagctcgacggcaaa
gagctgtgcaacgaaagggtgaccatcgagcacgcccgcgtccgtctgcgcggcggccga
ggcagaggcggtagcggcggaggaggaggcggacgtttctccgatcgctatggccgaggc
tcccagaacagtcggagtcgaaaccctcctccgatgcgcacggagaatcgtcttatcgtg
gagaacttgtcctctcgcgtcagttggcaggacttgaaagatttcatgagacaagctgga
gaggtgacatttgcagacgcacatcgacccaaactcaacgaaggagtggttgagtttgct
tcttacagtgatctgaaaaacgctcttgagaaactgtctggaaaggaaatcaatggcagg
aaaatcaagctcattgaagcagctaagaagaggtcgagaagtcgttcgcggtccgagagc
tcctcccgctcgcggtcccgttcccgcggtcgctccccatcgcgctccccccgacgctcc
cgcagcccggccaaggcccacaaccgctcccgctcccgcagcggctcccccggcggcggg
aactcgtcccccaaccccaaatcaaaggatgccgccaagcgctcctccaagatgagtaag
tccgccactccaccttcccctccgcccgcccagagagcctccatgtcccgctcacgctcc
cgttcacgctcccgctcccgttccccttctactgacagccagcgctaa
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