Mugil cephalus (flathead mullet): 124998952
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Entry
124998952 CDS
T08342
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04140
Autophagy - animal
mcep04148
Efferocytosis
mcep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124998952 (vps18)
04148 Efferocytosis
124998952 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124998952 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
124998952 (vps18)
Membrane trafficking [BR:
mcep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124998952 (vps18)
Hops complex
124998952 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
zf-RING_2
DUF1664
zf-RING_UBOX
Apolipoprotein
DUF2175
zf-ANAPC11
DUF5600
zf-rbx1
zf-C3H2C3
KNOX2
zf-RING_5
DUF4446
Sec8_N
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
124998952
NCBI-ProteinID:
XP_047429580
LinkDB
All DBs
Position
21:12812565..12818280
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNSRQSAQQHSRLSTANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLSVCNNQLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVHKLFLDPTGSHLLISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSHGIIFEAEISA
NEGSLFNNNPDQYFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFSQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVKVWEYTPDIDLNHNKPISIVLTQFHFLLLLHDRVKAICTLNGHVVYE
DVFPDKFGSLKKMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKPSERTQITLLVTWLAELYLNRLGQLESDGNTIIFLETRDEFRQFMSSSKHKECLY
NNRSTIYDLLASHGNMDDMVYFSVVMQDYERVISHYCQHDNFSDALDVLAKHCDEKLFYK
FSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHTSEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSAYKQNRLEE
LQKKLAATTQSSKSRHRPVPKDEGDTSSLGKGSAGTSREQLKSDIDDIIASECVYCGELM
IKTIDKPFIDPQKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctattctcgatgagtacgaggactctcagaacagcaggcaaagtgcgcagcag
cacagccgcctgtcaactgctaacatcgggataacgcactcaggttttgtgaacgtgagg
cttgaggaagagaagccgatattcaataagcagaggattgattttacaccccccgagaag
ataaaccatctctcagtctgcaacaatcagctctgcatgagtctgggaaaggacactctt
ctgaggattgacttggccaagccagatcaacccaaccagacggagttaggaaggaaagat
gacagcaaagtgcacaaattgttcttggaccccactggctcccatctgctgatcagcctg
agcaccagtgagtgtctgtacctcaacaggaatacgcagaaggtgcgcagtctgtcccgc
tggagaggccacctcatcgagagcgtgggctggaacaagctgctgggcaacgagaccagc
acaggacccatcctggttggcaccagccacggcatcatcttcgaggctgagatctctgca
aacgagggcagcttgttcaacaacaatcctgatcagtacttcagacaggtccactccctg
gaggaggatggtaagcctgccccagtctgctgcttagaggtggagcggggccttgagaac
aagtacttcattatagccaccacccgcaaacgcctgttccagtttgtgggtaaggtggcc
gagggctcggagcagcaaggcttcagttccatcttcagccagaaccaggacctgctgcct
agtttccaggagttcccagccaacatgggatacagcgagatcaccttttacacctcgaag
cttcggacgtcgcccaaggcgttcgcatggatgatgggtaatggagttctgtatggccag
ctggactacgtcaggcctgattccctgctgagtgacgtgaaggtatgggaatacactcca
gacattgaccttaatcacaacaagcccatctccattgtgctgacacagttccacttcctg
ttactgctccatgaccgagttaaggccatctgcactctgaacggacatgtggtgtatgag
gatgtgttcccagataaatttggcagtcttaagaaaatgatcaaagatccagttggtggg
ttggtgtggatctacaccgagcgggcagttttccggtaccacatccagcgtgaggccagg
gacgtctggcagatgtacatgagcatgaataaatttgacctggccaaggagtactgccgc
gaccggccggagtgcatggacatggtgctggccaaggaggcggagcactgcttccagaat
aagcgatacctggagagtgccaaatgctatgcgctaacacagaactactttgaagagata
gcgcttaagttcatagaagccaaacaagaggaggcattgaaggagttcttactgaagaag
ctgaacaatctgaaaccgagtgagagaacgcagatcaccctgctggtcacctggctggca
gagctgtacttgaaccgcctcgggcagctggagagcgacggcaacaccatcatattcctg
gagacccgcgatgagttccgccaattcatgagcagctccaagcacaaggagtgcctctac
aacaaccgcagcaccatctacgacctgcttgccagccacggcaacatggacgacatggtt
tacttctcggtcgtcatgcaggactacgaaagagtgatatcccactactgccagcacgac
aacttcagtgacgctctggacgtgctcgccaagcactgtgacgagaagctcttctacaag
ttctcccccgtcctcatgcagcacatccccaaaaaagtggtggacgcgtggattcagatg
ggcaagaggctggacccgaagaagctcatcccggctctgatgaactacagccagatgggc
agcacgcagcagatcaatgaaaccatccgctacatggagttctgtgtgtatgagctgaat
gtgacagaggaggccattcataactacctgctgtcgctgtatgcgaagtataagccagac
tctttgctgtggtacctggaacaggcaggtacacacacctcagagatccactacgacctg
aagtatgcactcaggctgtgtgcagagcacggttacctccgggcctgtgtcctggtttat
aggattatggaactttatgaggaggcagtggatcttgctttacaagtagatgttgactta
gctaagtcatgcgccgacctgcctgaggatgacgaggagatgaggaaaaagttgtggctg
aagattgccagacacgtggtgcaggaggagaaagatgtgaagaaggccatgaactgtctg
tccagctgcaacctactcaagattgaagacatcctgccttttttcccagactttgtcacc
attgaccactttaaggaggccatctgcagctctctggaagagtacaaccagcacattgaa
gagctgaagcaggaaatggaagaagccacggaaagtgccaaacgtatcagagaagacatc
caagaaatgaggaacaaatacggcgtagtggattcccaagagaagtgtgctgcttgtgac
ttcccattgctcaacaggcccttctatctgttcctttgtggtcacatgttccactatgac
tgcttattccaggaagtgacacctcacctgtcagcctacaagcagaatcgcctggaggag
ctccagaaaaagctggccgcaaccacgcagtcctccaaatctcgccaccgtccagtgccc
aaggacgagggagacacttccagcctgggaaagggcagtgcaggcacaagccgcgagcag
ttaaagtcagacattgatgatatcattgcgtctgagtgcgtgtactgcggtgaactgatg
atcaaaaccatcgacaagcctttcattgacccgcagaaatttgaggaggagaaatccagc
tggttgtga
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