Mugil cephalus (flathead mullet): 124999410
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Entry
124999410 CDS
T08342
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep00100
Steroid biosynthesis
mcep01100
Metabolic pathways
Module
mcep_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124999410 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mcep01006
]
124999410 (fdft1)
Enzymes [BR:
mcep01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
124999410 (fdft1)
Prenyltransferases [BR:
mcep01006
]
Terpene biosynthesis
Squalene/phytoene synthase
124999410 (fdft1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
TM1266-like
HAUS4
GST_C_8
Motif
Other DBs
NCBI-GeneID:
124999410
NCBI-ProteinID:
XP_047430273
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All DBs
Position
21:complement(9809600..9816593)
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AA seq
456 aa
AA seq
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MAGACCKCPVSLSVFKRSLSVAAPRGCGSAPRSLLQGWRLGERGLHEAARPSSALRPAGF
HRQTVFLCLSCQESMSVSLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDT
VEDDMTIPLDKKVPMLNDFHTYLYQDDWCFTESHEKDRQVLEDFPTISLEFRNLAQEYRD
VISDICHRMGVGMAEFLEKKVGSMKEWDKYCHFVAGLVGIGLSQLFSASQLEDPEVGRDT
ELANSMGLFLQKTNIIRDYLEDTQEGRHFWPQEAWSKFAGRLEDFAQPEKLECALSCLNL
LVTDALRHVPDVITYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPMVFQGVVKIRKGQA
VTLMMEATNMGAVQTIITQYSQEILQKVTITDPSRDKTLHILTIILEKSALSKSSLATRT
HHLSPMYLSAAMLLAALSWQYLSTTAAQTQGAGEGQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcttgctgcaagtgtccagtctctctctccgtgttcaagcgctctctgtca
gtggccgccccgcggggctgcggctccgctcctcggtccctcctgcagggctggaggctc
ggggagcggggcctgcacgaggccgcccgaccctccagcgccctcagacccgcaggcttc
caccgacaaaccgtcttcctctgtctctcttgccaggagtccatgagcgtgagtcttagg
acctgttacctatacctgaaccagaccagccgcagctttgcagccgtgatccaggctctg
gacggagagctgagacacgccgtttgtattttctacctggtgctccgcgcgctggacaca
gtggaggacgacatgaccatccccctggacaagaaggtgcccatgctgaacgacttccac
acctacctttatcaggacgactggtgcttcaccgagagccatgaaaaagatcgccaggtc
ttggaggatttccccacaatatcactggaattcagaaacctcgctcaggaatacagagac
gtcatctcggatatctgccaccggatgggagtggggatggctgagttcctggagaagaaa
gtgggatctatgaaggagtgggacaagtactgccactttgtcgctggtctagtcggcatc
ggcctgtcacagctcttctcggcgtcccagttggaggatcctgaagtgggccgagacacc
gagctggcgaactccatgggcctgttcctccagaaaaccaacatcatccgggattatcta
gaggacacgcaggagggacgtcacttctggccacaagaggcctggagtaagttcgctggt
cgtctggaggattttgcccagcccgagaagctggagtgtgctctgtcctgtctcaacctg
ctggtcactgatgctctacgacacgtcccagatgtgatcacctacctgtctcggctgcgc
aaccagagcgtcttcaatttctgtgcaattccacaggtgatggcaatagctacactctct
gcgtgctacaacaaccccatggtgttccagggagtggtgaagatcagaaaggggcaggcc
gtcaccctcatgatggaagccaccaacatgggggcagtgcagaccatcatcacccagtac
agccaggagattttacagaaggtcaccatcactgacccgtcacgggacaagaccctgcac
atcctgactataatcctagagaagtccgccctgtcaaagtccagcctcgccaccaggaca
caccacctgtctcccatgtacctgtctgctgccatgctgctcgccgctctcagctggcag
tacctcagcaccacagcggcacagacgcaaggagccggcgagggacagtga
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