Mugil cephalus (flathead mullet): 124999416
Help
Entry
124999416 CDS
T08342
Symbol
rnf8
Name
(RefSeq) E3 ubiquitin-protein ligase rnf8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
124999416 (rnf8)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
124999416 (rnf8)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124999416 (rnf8)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124999416 (rnf8)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
124999416 (rnf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
Yop-YscD_cpl
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-RING_10
MAT1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124999416
NCBI-ProteinID:
XP_047430282
LinkDB
All DBs
Position
21:5456572..5464358
Genome browser
AA seq
532 aa
AA seq
DB search
MDIATTDSGAAEEDECSDSEVLCLMRVGRNSDWLHLFENTEITVGRGADVTYQLMSPSCP
LMISRLHCTFKQRDDGQWTVTDKKSLNGVWVNGNRIPADEAHQLRLGDSIQLGVPVTGAK
VEFDYILVQRPLKDIKLCLAKRQREGAKAAHITKKPKRKLTMDEVEPSTSKPKLYRCSSA
DKCFAKPCPLSPKKQRLSHTQPEETGPSRRARDVERPSDSSSAPCDLDNLQMYSQNILLL
REQVDDTQRQVASLEGEPRQADPHREVQVKELQTQLETLRAKMHRMETLEKSFSETKRQL
EEQKTQQQEELLKKQLEGALQEQKKVIDELALSRQGFEEVLLAKNKELEVTKEEKEKAKA
QKEEVVTQVTEVLENELQCIICSELFIEAVILNCAHSFCCHCIKQWRKKKDECPICRQPI
QSQTRCLALDNCIDSMVENLSLDMKARRQTLISERKAADSAEVMVIHDDDSSGGGGSSSS
SSSSDSDGSGSMVSIYSSVSSVVSLDTDSSIHLESSSPFSGFSDESFDEFED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggacatagcaacgacggactccggcgccgccgaagaggatgaatgttcagactcggag
gttttatgtttgatgagagtcggaagaaactcagactggcttcacttgttcgaaaacacc
gagatcactgttggacgtggtgcagatgttacctaccagctcatgtctccaagttgtccc
ctgatgatctccagactgcactgtactttcaagcagagggacgatggacagtggacagtg
acagacaagaagagtctcaacggcgtgtgggtgaatggaaatcgcattcctgccgatgaa
gcccatcagctccggctcggagactccatacagctcggagttcccgtcaccggagccaaa
gtggaattcgactacatcctggtccagcggcctctcaaagacattaaactctgcctggcg
aagagacagagggaaggtgccaaagctgctcacataaccaagaagcctaagaggaagttg
accatggatgaagtggagccatctacctcaaagcccaagctttaccgctgctcctccgcg
gacaagtgcttcgcgaagccctgccctctgtccccgaagaaacagcggctcagccacacg
cagccggaggaaactggacccagcagacgggcccgagacgtggagcgtccctccgacagc
tccagcgctccttgcgatctggacaacttgcagatgtacagccagaacatcctgctgctg
agggagcaggtggacgacacccagaggcaggtagcgtctctggagggggaaccccggcag
gccgacccgcaccgagaggtgcaggtgaaggagctgcagactcagctggagacgctccga
gccaagatgcacaggatggagacgttagagaagtccttcagtgaaactaagaggcagcta
gaggagcagaaaacacagcagcaagaggagcttttgaaaaagcagctggaaggcgctttg
caagagcaaaagaaggtgatagatgaacttgccctctctcgacaaggttttgaagaggtt
cttctggccaaaaacaaagagttggaagttacgaaggaggaaaaagaaaaggcaaaagcc
caaaaagaggaggttgttacacaagtgactgaagttctggagaacgagcttcaatgcatc
atctgctctgagctcttcatcgaggcggtcatcctgaactgcgctcacagcttctgctgc
cactgcatcaagcagtggcgcaagaagaaagacgagtgtcccatctgcagacagcccatc
cagtcccagacccgctgcctggcgctggacaactgcatcgacagcatggtggagaacctg
agcctggacatgaaggcgaggcggcagaccctcatctctgagaggaaagcagctgactct
gccgaggtgatggtgatccacgacgacgacagcagcggcggcggcggcagcagcagcagc
agcagcagcagcgacagcgacggtagcggtagcatggtgtccatatatagcagcgtcagc
tctgtggtctccttggacacagacagtagcatccatctggagtccagctcccccttcagc
ggattctcggacgagagtttcgacgagtttgaggattag
DBGET
integrated database retrieval system
