Mugil cephalus (flathead mullet): 124999744
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Entry
124999744 CDS
T08342
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
124999744 (pdzrn4)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124999744 (pdzrn4)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
124999744 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
124999744
NCBI-ProteinID:
XP_047430704
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All DBs
Position
22:complement(10826394..10862321)
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AA seq
822 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKIEHDDAVVEAIRRDPIVVQVLRRTPSRAT
TAVVHDNIGATQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNTPAEVERTEEYEFEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSITLLVTRPEIQLEEE
AVWLDEEQQQLVEELKMEILEERRKQKERGFDRGDEHQAEEDMTTDTATCSSNNQDSGLG
RSTDSTENQPLLARLHRRSPAHCLRDRWRAEHTHTRRGAAVPQESQGARTQSSGQGHEGV
VSIRNGGGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECRLTEQGGGDGDSVDDG
DVGRGGVEQELRMLNEELRSIELECQSIMQAHQLRQSHQLEHTQSPVSSPGRSPKDGHKR
HGRLADIHEHPERSDSDKIREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKN
LRLVSSTPSSPIPIPKPQGAASYGRPADPGPVISSSPDQSNPSRSESDPALPADDERCEK
RGRTRESRRGLPYGSSYQTSPYHGQGASRQLQSYMQLLQQHSSLEYSQSQLSLLSLCRDP
VHRNGRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSE
MKMGRYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGRKEINILELSHKK
MMKKRNKKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctctatgag
attgcacaggtgaacgggcgtgacttctccaagattgaacatgacgatgcagtggtggaa
gccatcaggcgagaccccattgttgtccaggttctccgacgcaccccttccagagcaact
actgccgtggtacatgacaacatcggggcaacacaggatgtgtgcgtggttgatgtctgc
acacaaacggacatcacattcgagcacatcatggcgctggccaagcttcggcctgctacc
cctcccgtcccagacatctgtcctttcctgctctctgacagctgtcattccatccacacc
atggaacatgagttttatgaatgtccagagtacctgtctaatacgccagcagaggtggag
aggactgaggagtatgagtttgaggaagtggagctgtgcaggcagaacagccaggaaaag
cttggcctgacgttgtgctacaggaccgacgatgaggaggacactggcatctatgtcagc
caggtggagccgaacagcatagcggcaagagacggtcgcatcaaggaaggagatcgtatc
ctacagattaatggctgtgaagtgcaagacagagagaaagccgtggccttgttgtcaagt
gaagaagcaaggagcatcacactactggtgactagaccagaaatccagctggaggaggaa
gccgtgtggcttgatgaggagcaacagcagctcgtcgaagagttaaagatggagatcctg
gaggaaaggaggaagcagaaggaacgcggctttgacaggggagatgagcatcaggcagaa
gaggatatgacaacagacacggctacctgctcctccaataaccaagacagtggattagga
agaagtacagacagtactgagaaccaaccgctgctggccaggctccacaggaggagtcca
gctcattgcctgagggatcgatggcgggcagagcatacacacaccagacgaggggccgca
gtgccgcaggaaagccaaggtgcaagaacacagtccagtggccaaggccatgaaggggta
gtgagtatccgcaatggtggaggtgggatccttggtttggagaatcgcttccagcaactc
ctggagctcaagtgtcaaatccgaaacggaggcgagtgtggagtgtactccattcgacac
agtatagagtgtagactcactgagcaaggcggaggggacggagacagtgtagatgacggc
gatgtaggaagaggaggggtggaacaggagttgaggatgttaaatgaggagctccgcagc
atcgagctggagtgccagagcatcatgcaggcccaccaactccggcagtcacaccagcta
gagcacacacagtccccagtttcctcaccaggaagaagccccaaagacggacacaagcgg
catggcaggctggctgacatccacgaacacccagagaggtcagacagtgacaagatacgc
gagaaggacagctccagtgcctacaatacagccgagagtgcacggtcaacaccgctaggt
atggagagatctcccgaccactctctgcagagacacatcagcatcaccaaccagaaaaac
ctccggctggtgtcttccacaccttccagtcctattcctatccccaagccccagggcgca
gccagttatggaagaccagcagatccaggtcctgttatctcaagcagcccagaccaaagc
aacccttctcggtctgagtcagacccggctctgcctgcagacgatgaaaggtgtgagaag
agaggaaggaccagagaatcaaggagaggacttccctatggctcttcatatcagacatct
ccctatcatggccagggagcatccaggcaactacagagctacatgcagctgctacaacag
cactcatccctggagtattctcagagccagctcagtctcctgagtctgtgtcgagatccc
gtgcaccgcaatggacggcctggggaaccccgtctagagtggaaggtcaaagtccgcgct
gacgggacgcgctatgttgcacggaggcctgcgcgggaccgcatacttagggagcgggcg
ctaaggatcagagaggaaaggagcggcggcatgaccacagatgatgatgccatgagtgag
atgaagatgggccgctactggagcaaagaggagagaaaacagcacttggcgcgggccagg
gagcaaagaaagaggagggagttcatgcaaaagagccgcctcgagtgtctaaaagagggg
ccagctagtggggctgagggcaggaaggaaatcaatatcttagagctcagtcacaaaaag
atgatgaagaaacgaaataaaaagatcctggacaactggatgacaatccaggagctgatg
agtcatggagccagagtcccagaaggttccaaagtacataatgccttcctatctgtcaca
acagtttag
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integrated database retrieval system
