Mugil cephalus (flathead mullet): 125000463
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Entry
125000463 CDS
T08342
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125000463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125000463
03009 Ribosome biogenesis [BR:
mcep03009
]
125000463
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125000463
Spliceosome [BR:
mcep03041
]
Complex A
U2 snRNP components
U2 related factors
125000463
Complex B
125000463
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125000463
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
90S particles
Helicases
125000463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
AAA_29
nSTAND3
AAA_7
Motif
Other DBs
NCBI-GeneID:
125000463
NCBI-ProteinID:
XP_047431986
EnsemblRapid:
ENSMGCG00000014715
LinkDB
All DBs
Position
2:14692249..14699823
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYAAVKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDKDRDRDTKPLSVP
SNSTAAMPVLPPMKQMAVHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDIITRQ
QSFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgcttggatttgggtgatgactacgctgctgtcaagaagaggtct
gacgggcgagacagggaccgcgacagagaccgcgaggaccgttcgagggacagggaccga
gacagggaccgtgacagggacaaagaccgggacagagacacaaagccgctgagtgtcccc
tccaacagcaccgcagccatgccagtgttgccgcccatgaagcagatggctgtgcaccag
cagatcaatccgttcaccaacctgccgcacacgccgcgctattacgagatcctgaagaag
aggttacagctcccggtgtgggagtacaaggaacgcttcaatgatatcatcacacgtcag
cagagcttcgtcctggtcggagagacgggctctgggaaaacaacacagatcccacagtgg
tgtgtggacatggtgagaggcttgcctggtcctaagcgggcggtagcttgtactcagccc
aggagagtggcagccatgagtgtggctcaaagggtggcagacgaaatggacgtcatgctt
ggacaggaagtcggttactccattcgatttgaggactgtagctctgccaagactatacta
aagtacatgacagacggtatgttactaagagaggccatgaatgacccgctgctggaacga
tatggtgtcatcatccttgacgaggcccacgagcgaactctggccacagatatcctgatg
ggagtactgaaggaagttgtccgtcaaagatcagatctgaaggtgattgtcatgagtgcc
acactagatgcggggaagttccaagtgtatttcgacaactgtcccctgctgacaatccct
ggccgtacgcatcccgtagagatcttttacaccccggagccagagcgggactacctagag
gcagcgatccgcacggtcatccagattcatatgtgcgaggaagacgaaggtgactgcctt
ctcttcctcactggtcaagaggaaatcgacgaggcgtgcaagcggatcaagcgcgaagta
gatgacctcggacctgaagtcggagacatcaaaatcattccactgtattccacgctgccc
ccacagcagcagcaacgtatctttgagcctcctcctccaagaaagccgaacggtgcaata
ggaagaaaggttgtggtgtcaacaaacattgctgagacttctctaacaattgatggcgtt
gtgtttgtaattgaccctggatttgccaaacaaaaggtgtacaatcctcgtattagagtg
gagtctttgctcgtcactgccatcagcaaagcttctgcccagcagagggcaggacgagcc
ggcagaacacgtccgggaaaatgcttccgcctctacacggagaaggcctacaaaacagag
atgcaggataacacataccctgagattcttcggtccaacttgggatcggttgtgctgcag
ctgaaaaaactggggatcgatgacctcgttcactttgacttcatggatccaccagctcct
gagacactaatgagagccctggagctgctgaactacctggctgccctcaacgatgacggt
gacctgacagagctgggctccatgatggcggagtttcccttggatccccagctggcgaag
atggtcattgcgagctgcgagtttaactgctctaacgagatcctttccattactgccatg
ctgtcagtcccacagtgttttgtccgccccacggaggctaagaaggcagcagacgagtcc
aagatgaggtttgctcacattgacggagaccacttgacgctgctcaacgtctaccacgcc
ttcaaacaaaaccatgagtctaaccaatggtgctatgacaactttgtcaactaccgttca
ctgatgtctgctgacaacgtgcggcagcagctgtccagaatcatggaccgcttcaatctg
ccccgtcggagcacagagttcaccagcagagattactacatcaacattcgacgagcgctc
tgcaccggcttcttcatgcaggtggctcatttggagcgcacaggccattacctcacagtc
aaagacaaccaagtggtccaactgcacccttctacagtcctggaccataagcccgagtgg
gtgctctacaatgaatttgtcctcaccaccaagaactacatccgcacttgtacagacatc
aagccagagtggctggtgaagatcgcaccgcagtactatgaaatgagtaacttccctcaa
tgtgaagctaaaagacagctggagcgaatcattgccaaattagagagcaaagagtattcc
cagtactga
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