Mugil cephalus (flathead mullet): 125000699
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Entry
125000699 CDS
T08342
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125000699 (sox1b)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125000699 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125000699
NCBI-ProteinID:
XP_047432269
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All DBs
Position
23:6436289..6438421
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AA seq
357 aa
AA seq
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MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGGGGGGGAGGKVPQERIKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLGSSAGVGMGGQRLESPGGGHAGANAGYAAHVNGWANGAYSGQ
VAAAAAAAHAMMQEAQLAYTQHPGSGAHPHHPHPHHHPHHHHPHNPQPVHRYDMSALSYS
PISNSQSYMSASPPGYGGITGYTHQHQSSGVSPVSGAIGGTLGSLVKSEPSVSPPVSTAR
APPCPAGDLRDMISMYLPSGEAAGDSSVQSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtggtgccccagaccaatcca
tctaacccggggggacacgcgggaggaggaggcggcggcggcggcgggggggccggaggc
aaagtcccccaggagaggatcaagagacccatgaacgccttcatggtgtggtcccggggc
cagcggaggaaaatggcccaggagaaccccaagatgcacaactcggagatcagcaagagg
ctgggcgcggagtggaaggtgatgacggaggccgagaagagaccgttcatcgatgaggcc
aagcggctccgggccatgcacatgaaggaacacccggactacaagtaccggccgcggagg
aagaccaagacgctgctgaagaaggacaagtactcgctggccggcgggctcctcggctcc
tcggcgggcgtggggatgggcggccagcggctcgagagccccggagggggccacgcgggg
gcaaacgcgggctacgccgcgcacgtgaacggctgggcgaacggcgcgtactcgggccag
gtggcggccgcggcggcggcggctcacgccatgatgcaggaggcgcagctggcgtacacg
caacacccgggctccggggctcacccgcaccacccgcacccgcaccaccacccccaccac
caccacccgcacaacccgcagcccgtgcacaggtacgacatgagcgccttatcttacagc
cccatctcaaactctcagagctacatgagcgcgtctcccccgggctacggcggcatcacc
ggctacactcaccagcaccaaagctccggtgtctcccccgtgtccggagcgatcgggggc
accctggggtccctcgtgaaatctgagcctagcgtgagcccgccggtctccaccgcacgc
gcgccgccgtgccccgcgggggacctgcgggacatgatcagcatgtatctgccgagcggc
gaggctgcgggggactcgtccgttcagagcagactgcacgtgctccacccgcagcactac
cagagcagcggctccactccggtaaacgggacggttcctctgacgcatatttaa
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