Mugil cephalus (flathead mullet): 125000749
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Entry
125000749 CDS
T08342
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcep03037
]
125000749 (rp1l1a)
04812 Cytoskeleton proteins [BR:
mcep04812
]
125000749 (rp1l1a)
Cilium and associated proteins [BR:
mcep03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125000749 (rp1l1a)
Cytoskeleton proteins [BR:
mcep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
125000749 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
125000749
NCBI-ProteinID:
XP_047432337
LinkDB
All DBs
Position
23:9505393..9521554
Genome browser
AA seq
2636 aa
AA seq
DB search
MHSVQTVMWDPHPPSKHASPLPAAPLLSSSRRARVTAATPAKRITFYKSGDSQFGGVRMA
VHKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGIHAIKHLEQLQDGGCYLCSDRRQAKP
INMELACKRPSIWYHHSRRPQRPEASPTTPPGHMHYKQRRILLVKNSEPGMRRSVVLSKR
SARSLRAFLDEVSEVMQFHVRKLYTAEGRRIDSVQSLMTCPGVLVCVGREAFSPLLVNFI
RKSSEEKLPGLSSRSSGLGPRTPGNGARSPATQAVRSPPHGAQSRASEYSEGHESKKNVN
FGLETKKSIIHPRSDSSNRSARFSLSSEKSYGNGVSTCSQSRPGIMNDDIEKRVLVNKDG
SLSVEMRVRFRLQNDETIQWSTQIKKSPSLTNECCPLDQAQPHYLQQGQSESCSDPDSTS
FEPEVVHYPSQPRQCVMEGNGCPCCYQRQEPQYDLWENPAHSHKHPPAPPPHRSTHTMVR
HTHSSSSSSSCNSRRVVRCRAQLSSCGAGSGSEQSQLVQKQMCLTEQVEHSVEVEQNGGT
HVEVCKVSRCCSRSEVVTMDSNLRPLSRKSVEDELTVEGQDERPLSAVSASSHVLQSLKE
DQDDEEEEDLPPSASQCCHSSEPSPTPEPHQNENTPSNVAKSAASSCHCGAATPHSAVTG
DVIVRAPSSRSRISDAQTPKSEAEDEVDGEDAEVKRGVSSLSGHTGLSAGSRKSGASSVC
RNCKGCKSRCSNSGSRASRRSNRSNRASPKPASPLNNQENIDNGADDADSDDSAVSTQSN
KSNLTNNGRVSTLSNVLEARAASVMSRTSHPESAGEEEDRAPSATSATSHKSTRSHISNG
CTADKNEERTPSAMSARSNKSSKSHKSKSEAPDISSREEAEGEDTGERSVSSLSAKSGAS
EKSHKSNCQAITKAAPPTEDTTTEEDDTNNRASSSLTVKSEKNERPDSVLSAKSAKSNVS
AKSRRSNCSNCAKSVSPVRKAADEPKIEVNGKDEDTEVEERATSAMSAKSNLSAKSNKSN
KTNKASERSPSPRSDAGGDGEIRATSQMSGRSAKSNKSVKSTKSSKCNGNAAENENNIVE
VERPVSAGSTRSHKSNSNGKTDANSEIGENPEEGEKAEERAASALSVKSASSAKSHNSKT
EVDQIADRGPSAMSGRSQASAKSSKSQKSKHISASPIPNDADIPVIETDGDEKQAETQDR
AASALSVKSKSSVKSSNSHKSSSSKNLSSANAVTINTPDEDDEEINETKERSPSAASRKS
NISAADEKTVDDVSRKSKSSELSNRQSLSPKRANSPRTPSPKPPAATPRRSQSPAQRLLP
DPGVEETRGPSALSVHSTTSTKSNKSRCRCGLEGKRQEDKEHEKSKENEDVTNDKASERA
ASALSSSSKRQKRESGGTEQPSRRNSSESVSLGLPEDQEIVDSDSGKSTLSFHKNAVSPE
PERARSTMSVKSNGNGRKSASSHNLPPVEIPTIETPRGGEDGGEKGVGQNSERAASIISV
KSSKSHKSSCKHGEKAAAQMLNSKAEEKPSTTKDAETESVKSATSTKKARNLDSSAMSSA
SAKARSKSPASASTKNANVAKTTPDPANNDTENHDLSRPASEAKGEEEISDKKATVSTCC
LKPKSEASAHSESKLKAPKQSKGTDSVKSHKDKSNAGSDNVKETPVKSPSRCPAHSSKPC
SQVESCTESILSHSLSAADLLKETMAAARPNSRQSKGSDKARSGKSGRSPRRCKDQDLTP
AFLPNASPNEVVSDWLRSIPANSNMLEFGDELNEEEQSAKEMNETPGEGVAKEEGSLEDD
KVEEKVGPEEDQGEDDDKCDVAPKERSSDPTPGDAGGTSRTNAILSVDGLPRNWQSSVAV
MKVLLSSSLGRCRSMPEVSPVYGRRLSTSARGLLDCLTQLQLIEPAVSPGSDHKDRQQQY
DDIMDILQSLWLTDPMNLQIKEGKDCGPEQVTPPRSSSGVDMSSGSGGSGKDNETPPKET
ESLHEDEPVGTPVEVAGDNETKIEPEEASAEQAKEGAECEQVLSEEQNGTLDSPKTTENP
SSSDKSSGNSSSKSPTDNERETMEGSSSGTPPTVLRAPLSKRLSQDPDPVWVLNLLKKLE
KQFMNHYINAMAEFKVRWDLDDSLILDTMMSELRDEVSRRIQSSVDREMKKIQSRAGRGG
RSPRPPQGGNLSRESTMTDKRRRMLKIMKNQSVKTADSLSDGELTGEFSDQRSDDEYCPC
DACVRKKLAARPLKANPLAAEAPVMMEFDLLKILQLKKSPTPSPVTAVKPVEVECDSMVV
DEEARNLEVVHEEEEEEGETKENIRPAIVLEETIHEEDEEEEEGEGEAGEEEGSSAGDEE
QEETGGEEGGEEEPSNNEEEEEEEEGAEEETSNKTTDDEERMGEDEGETGEDDTGDDKGE
TATGNEDEEESDKDTVKEATTGEGDTTENGEEEECEGSDSKPEEEEESGETGDDDTANAD
STPVEELAEGNVSGSAEAEDEDEGGDGTAEEESREDEKGEESEEQEKGASEEERVSPQDQ
AGAPVCVTEGEEADAEDSDGDGKRLSDEKEGDGGEGEAVEDVVEEEEGEDTVEGNKKEDG
ALLHQFTRTSVESQPGSLEDVGTDSAPIPSMALPKMAAGGGAKRSRSPARVKQGGR
NT seq
7911 nt
NT seq
+upstream
nt +downstream
nt
atgcattcggtccagacagtgatgtgggacccccaccccccgtctaagcatgcctcgccc
ctccccgctgcgccactactctccagctcgcgccgtgcccgtgtgaccgcagccaccccg
gccaagcggatcaccttctacaaaagcggcgacagccagtttgggggcgtcaggatggcc
gtgcacaagcgcagcttcaaatgcttcgacgcgctgctggacgacctttctcaaaaggtg
cccttgccatttggtgtgcggactgtcaccaccccccgcggcatccacgccatcaaacac
ttggagcagctccaggacggcggctgctacctctgctctgaccggcgccaggctaagcca
ataaacatggagctggcttgcaaacgcccgagcatctggtaccaccacagccggaggcca
caaaggcccgaggcctcgcccacgacgccacctggccacatgcattacaagcagcggcga
atcctgctggtgaaaaacagcgagccgggcatgaggaggagcgtggtgctgagcaagagg
tcagcaaggagcctgagagcctttcttgacgaggtgtctgaggtgatgcagtttcatgtc
cgcaaactctacactgcagaggggcgcaggattgacagtgtgcaaagcttgatgacttgt
cctggcgtgctggtgtgtgtcggccgagaagccttcagtccgttgctggtgaactttatt
cggaagagctcagaggaaaaactgcccggtttgagcagcaggtcttctggtcttggcccc
cggactcctggaaatggggcccggtcccctgctactcaagcagtaaggtcgcccccgcac
ggagctcagtccagggctagtgagtacagtgaaggacatgaaagcaagaaaaatgttaac
tttggtctggaaaccaaaaagagcatcatccacccccgctccgattcctcaaaccgctcc
gcccgtttctctttgtcttctgaaaagtcctacggcaacggtgtcagcacctgctcccag
tccagaccgggtatcatgaacgacgacattgaaaagcgtgtcctggtcaacaaagatggc
agcctgtccgtggagatgagggtgcgttttcgcctccaaaacgacgagaccattcagtgg
tccacgcagattaaaaagtccccatctctgaccaacgaatgctgccctctggatcaagcc
cagccgcattacctgcagcagggccaatcggaaagctgctctgaccctgattccacgtcc
tttgagccagaggtcgtgcactatcccagccagcctcgacagtgtgtgatggaggggaac
ggctgcccttgctgctaccaaagacaggaaccgcaatatgatttgtgggaaaaccctgca
cacagccacaaacatcctccggccccacctccacacagatccacacacactatggtgaga
catactcactcatctagctcttcctcatcttgtaactccagaagggtggtgcgctgccgt
gcgcaactctccagttgcggggcgggctcaggttcggagcagagccagctggtccagaaa
caaatgtgcttgacggagcaggttgagcacagtgttgaggtggagcagaatgggggcacg
catgttgaggtgtgcaaagtgagccgttgctgcagtcggagcgaagtggtcaccatggat
agcaaccttcgaccgctcagcagaaaatcagtcgaggacgagctaacagtagaaggacag
gatgagcgaccattgtcagcggttagtgcatcctcacatgttcttcaatcactgaaagaa
gaccaggatgatgaggaggaggaggatctgccacccagcgcctcacagtgctgccatagc
agtgagccatctccaacccctgagcctcaccagaatgaaaacacaccaagcaacgtggca
aagtctgcagcctcttcttgtcattgtggagcagccaccccacactcagcagttacaggg
gacgtgatagttcgagcgcccagctccaggtccagaataagtgatgctcagaccccaaaa
tcagaggcagaggatgaagttgatggtgaggatgcagaggtaaagaggggtgtcagtagc
ttgtctggtcacacaggactatcagcaggttctcggaaatcaggggcatccagtgtgtgc
cggaattgtaaaggctgcaaaagcaggtgctctaattccggcagcagagcttcacggaga
tccaatcgctccaaccgagcctctccaaagcctgcctctcctctcaacaaccaagagaat
atagacaacggcgcggacgatgctgattcagatgattcagccgtgtcaacacaatccaac
aagtccaacctcaccaacaatgggcgtgtctctaccttatcgaatgtcttggaggccaga
gcagccagtgtcatgtccagaacatctcaccctgagtcagcgggagaagaggaagacagg
gctccaagtgccacttcagccacaagccacaaatctaccagatctcacatctctaatggc
tgcacagcagacaaaaatgaggagagaacccccagcgcaatgtcggcccggtccaacaag
tccagcaagtctcacaagtctaaaagcgaagctccggacatcagttcaagagaggaagca
gagggagaggacactggtgagagatcagtcagctccttgtcagcaaaatctggcgcttca
gagaagtctcataagtccaactgtcaggcaattaccaaagctgcacccccaactgaggac
acaactacggaagaggatgacacaaacaacagagcttccagcagcctcactgttaagtct
gaaaagaatgaaagacctgatagtgtcctatcagccaaatctgctaaatcaaatgtttca
gcaaaatctcgcaggtcaaattgcagcaattgcgcaaaatctgtatctccggttagaaag
gcagcagatgaacccaaaatcgaggtaaatggaaaggatgaagacaccgaagtagaggaa
agagccacaagtgcaatgtcagcaaagtccaatctgtctgccaagtctaataaatccaac
aaaaccaataaagcttcagaaaggtcaccctcccccaggtcagatgctgggggagatgga
gaaataagggcaacaagtcaaatgtctggcagatcagctaaatcaaacaagtctgttaag
tctacaaagtcgtccaaatgtaatggcaatgcagctgaaaatgaaaacaacattgtagaa
gtggaaaggccagtcagcgcaggctccaccagatctcataaatctaacagcaatggaaag
acagatgcaaattctgaaataggagagaatccagaagaaggtgagaaagctgaggagcgg
gcagccagtgctttatctgttaaatcagcctcctctgcaaagtctcacaactcaaaaaca
gaggtggaccaaattgcagacagaggtcccagtgccatgtcagggaggtcgcaggcctct
gccaaatcctccaagtcccagaagtcaaaacatatctcggcatctccaattcccaatgat
gctgatattcctgttattgagacagatggagatgaaaaacaagctgaaactcaggaccgg
gcggcaagtgctttgtctgtaaagtcaaaatcttcagtgaagtccagtaattctcacaag
tccagttctagcaagaatctctccagtgcaaatgctgtcaccattaacacaccagatgag
gatgatgaggaaataaatgagacaaaagagagatcaccgagtgctgcatcaagaaaatcc
aacatttccgctgcagatgaaaagacagtagatgatgtttcacgaaaaagtaaatcctct
gaactctcaaatcggcaatcactttcgcccaagagagcaaattcaccacggaccccgtca
cctaaacctccagctgctactcccagacgttctcagtctcctgcacaacggttgctgcct
gaccccggtgttgaagagacaagagggcccagtgccttgtcagttcattcaacaacctct
actaaatccaacaagtccaggtgtcgttgtggattggagggaaagagacaagaggataag
gagcacgagaaatcaaaagagaatgaagatgtgacaaatgataaggcatccgaacgagct
gccagcgccctgtcatcctcatctaaaagacagaagagagaatcaggaggcacggagcaa
ccttcgagacgaaactcatcagaatcagtctctcttgggttgccagaagaccaagaaata
gttgactcagacagtggtaagtccactctttcttttcacaaaaacgctgttagcccagag
ccggagagagcaaggtccaccatgtctgtgaagtccaacggtaacggcagaaaaagtgct
tcatctcacaatcttccaccagtcgagatcccgacgattgaaactccaagaggaggtgaa
gatggaggggaaaagggcgtggggcaaaactcagaaagagcagccagtataatctcagtc
aaaagcagcaagtctcataagtcatcttgcaaacatggtgaaaaagctgcagctcagatg
cttaacagtaaggctgaagaaaagcctagcacaaccaaagacgctgaaacagaaagtgtg
aaatctgcgacatcaacaaaaaaagctagaaatctggactcatctgcgatgtcgtcagca
agtgctaaagcccggagcaaatctcctgcaagtgccagcacaaagaatgctaatgtagca
aaaacaactcccgatccagcaaacaatgacactgaaaaccatgaccttagtagaccagct
agtgaagccaaaggagaggaagagatttcagacaagaaggcaaccgtctccacatgttgc
ctcaagcccaagtcagaagcttcagctcactcagaatcaaaactaaaagccccaaagcaa
agtaaaggaacagattcagttaagagtcataaggacaaatccaacgcaggaagcgacaat
gtgaaagaaactcctgtcaaatctccaagccgttgtcccgcacacagctccaaaccatgc
agccaagtggagtcgtgtactgaaagcattctgtctcactctctgtctgcggccgacctg
ctaaaagaaaccatggcggctgctcgtccaaacagccggcagtcgaaaggtagcgacaag
gccagaagcgggaaaagtgggaggtctccgagacgttgtaaggatcaggacctgacacct
gcctttctgcccaacgcgtcccccaatgaagttgtaagcgactggctcagaagcattcct
gctaacagcaacatgcttgaatttggcgatgagttgaacgaggaagagcagagtgcgaag
gagatgaatgagaccccgggagaaggggtagcaaaggaggaggggagccttgaggatgac
aaagtggaggagaaagttgggcctgaagaggaccaaggagaggatgacgataaatgtgat
gtagcaccgaaggagaggagttcagatccaactccaggcgacgcaggagggacgtctcgc
accaatgcaatattgagcgtcgatggtcttccaaggaactggcagtcctctgtagccgtg
atgaaagttctgctgagctcttctctgggtcgatgtcggagcatgccagaggtgtctccg
gtttatggacgtagactgagcacatcagccaggggtcttttggactgcctgacccagctt
cagcttatcgagccagcagtgagccctggcagtgaccacaaggaccgacagcagcagtat
gacgacattatggacatccttcaatccctgtggctcactgaccccatgaaccttcagatt
aaggaggggaaagattgtggcccagagcaggtgacaccacctaggtcctcctccggtgtg
gatatgagtagcggctctggtggatcagggaaggacaatgaaacgcctccaaaagagaca
gaatctttacacgaggatgagccggtggggacgcctgtggaagtggcaggagacaacgaa
actaagatagaacctgaggaggcatcagcagagcaagctaaggaaggcgcagaatgcgaa
caggtgcttagcgaagaacaaaatgggactctggacagcccaaaaacgactgagaacccc
tcgtcatcagacaaaagctccggcaacagcagctccaaatcccccactgataatgagcga
gagacgatggaaggctccagctcagggacgccaccgaccgtcctacgagcaccgttgtcc
aaaaggctatcgcaagaccccgatccggtgtgggtacttaaccttctgaagaagctggag
aagcagttcatgaaccactacattaacgccatggcggagttcaaagttcgctgggacctg
gacgacagcctcatcttggacaccatgatgtccgagctgagggacgaggtgagccgtcgc
atccagagcagcgtcgaccgtgagatgaagaagatacagagtcgagctggaagaggggga
aggtcgcctcggccaccgcaaggagggaacctctccagagagtccaccatgacggataag
aggcgccgaatgttgaagatcatgaagaaccagtctgtaaaaaccgccgactctctcagc
gacggagagttgacgggcgagttcagcgaccagcgaagcgacgacgagtactgcccctgc
gatgcgtgcgtgcgcaagaaattggccgctcggcctctcaaagcaaacccgctggccgcc
gaagctcctgtgatgatggagtttgacctcctcaagatacttcagctgaagaaaagcccg
acgccttctcctgtaactgcggtaaaacctgtggaggtggaatgcgacagcatggttgta
gacgaggaggcgaggaatttagaggtagtccatgaggaagaggaggaggagggtgaaact
aaggagaatatcagacctgctattgtattagaggagacgattcatgaggaagatgaggaa
gaagaagaaggcgagggagaggcaggagaagaagaggggagtagtgcaggagatgaggag
caggaagaaacaggtggtgaggaaggtggggaagaggaaccatcaaacaatgaagaggag
gaggaggaggaggaaggagcggaggaggaaacaagcaacaaaacaaccgatgatgaggag
agaatgggtgaggatgaaggagagacaggagaggatgacacaggggacgacaagggagag
acagcgaccgggaatgaagacgaagaagagagtgacaaggacacggtaaaggaggcgaca
acaggcgaaggagacaccacagaaaatggagaagaagaggagtgtgaggggtccgactcc
aagccggaggaagaggaggagtctggggaaacgggcgatgacgacacagcaaacgcagac
tcaacgccggtggaagagttagcggaggggaacgtcagcggctccgccgaggcagaggac
gaagacgaagggggtgacgggacggcggaggaagagtcacgcgaagacgaaaaaggagaa
gagagtgaagagcaggaaaagggggcgtctgaggaggaaagagtctcaccacaggaccag
gccggggctcccgtctgcgtgacggagggagaagaggccgacgccgaagactcggacggc
gacggcaaacgtctgagtgacgagaaagagggagacggaggcgagggggaggctgtggaa
gacgtcgttgaggaggaagaaggcgaggatacggtggagggaaacaagaaggaggacggg
gctctcctgcaccagttcaccaggacgtcagtggagtcccagcccggctcgttggaggac
gtcggcacagattcggccccgattccctccatggcgctgcccaaaatggctgcgggtggc
ggcgccaagaggagcagatcaccagcgagggtcaaacaaggagggcgatga
DBGET
integrated database retrieval system
