Mugil cephalus (flathead mullet): 125000843
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Entry
125000843 CDS
T08342
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04140
Autophagy - animal
mcep04148
Efferocytosis
mcep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125000843 (vps16)
04148 Efferocytosis
125000843 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125000843 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125000843 (vps16)
Membrane trafficking [BR:
mcep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125000843 (vps16)
Hops complex
125000843 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
125000843
NCBI-ProteinID:
XP_047432493
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All DBs
Position
23:16237166..16245208
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AA seq
834 aa
AA seq
DB search
MAFITANWNPLGEAFYRKCDLYDMCWTLGDGLKDSLVAAAPYGGPIAVLREPLRRPPSSR
PQLEIYSASGVAIASFPWKSGPVVQLGWTVSDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVVQAKVFHSPYGTGIAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELFILDNTSCTAVCPPGLSPQAGSIVHMAVSFSYKYLALFTDTGHL
WTGSSHLQEKLSGVDTKKTTPPKQMVWCRRPKSQQASVVLMWDRLLLVAGVCNDTIQFPI
DDDCVLVGELDGVRIITSTHQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVQQCVEAAGHEYDTNTQKSLMRAASFGKCFLTDFSPDQFVTTCR
ELRVLNAVRDSSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCLKVGDSPGVSYSHIAAKAHECGRPELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVDSGDTDLVYTVVSFLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQDTLKDLYNQDDDHQELANYYVSASYREKRLESRLSVLQTAVDEFNKAKNE
FAAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLTLGLHKQAEQLYRDFKVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCIKCNNKYEAKKYVSKVTPEQK
VKAHLAVGDMEGAADAAIERRNDSEMAAVLSRCSTSDRLLIDRLNRARTAAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagcaaactggaacccgctgggagaagctttctatcggaagtgtgac
ctgtatgacatgtgttggactctgggggacggactgaaggacagtttggtggcggccgcg
ccctacggaggacccatagctgtcctcagagaacctctcagacgtccccccagctctcgt
cctcagttagagatttactctgcctctggagtcgccatcgccagcttcccttggaagagt
ggtcccgtggtccagctgggttggacggtcagcgatgagttgctgtgtgtccaggaggac
ggatcagttctgatctatgatctgtttggatcctttaagagacacttcagcatgggacag
gaagtcgttcagagtcaggtggtccaggccaaggtgttccactctccctatgggacggga
atcgccatagtaacaggctcctcccgcttcaccctggcaaccaacatagacgacctgaag
ctccgccggttaccggaggtcccaggtcttcagggcaagccgtcctgctgggtcgtcctc
actcaggacagacagaccaaagtcctgctgtccaacggacccgaactcttcatcttggac
aacacgtcttgcaccgctgtgtgtcctccaggtctcagtcctcaggctggcagcatcgtc
cacatggccgtgtccttcagctataaatacctggctctcttcactgacactggacacctg
tggacaggctcctcccacctccaggagaaactgagtggagtggacaccaagaagacgacc
cccccgaaacagatggtctggtgtcgcagaccaaagagtcagcaggcctctgtggtgctg
atgtgggacagactgctcctggtggccggagtctgtaacgacaccatccagttccccatt
gacgatgactgtgtgttggtgggagaactggacggagtccggatcatcacctccacccat
caggagctgctgcaggaggttcctctggtctgtcaggacatcttcaagatcgcctccatg
gctcctggagctctgctgcttgaggcccaccgagagtacgagaagtcgagtcagaaggcc
gatgagtatctgagggaaatcaaagagcaaagcatgctgggagaagcagtccaacagtgt
gtggaggcggcaggtcacgagtacgacaccaacacccagaagtccctgatgagggcggcg
tcctttggcaaatgtttcctgaccgacttcagcccagatcagtttgtgacgacctgcaga
gaactacgagtcctgaacgctgtccgagacagcagcgttggactaccactcactcatact
caatttaaacagatgactctacaggtgttgattgacaggctggtatatcgacagttttat
ccgttagcgattgaaatctgtcgttacctgaagattcctgattatcaaggagtcagtcga
gtcctcaagcactgggcatcatgcaaggtgcagcagaaggacctatcagacgaggccata
gctcgagcagtgtgcctcaaggtgggagattctccaggtgtctcgtactcacacatcgca
gctaaggctcatgaatgtggacgtcctgaactcgccatcaagcttctggatttcgaggct
cggtccggagaacaagttcctctgttgctgaagatgaagaggagtcagttggctctgagc
aaagctgtggacagcggagacactgacctagtttacacagtggtgagtttcctgaagaac
gagatgaaccgaggagacttcttcatgaccctgaggaaccaaccagtggctctgagcctc
tacagacagttctgtaaactacaagaacaggacaccttgaaggatctctacaaccaggac
gacgaccaccaggaactggccaactactacgtcagtgccagttacagagagaagaggtta
gagagtcgcctgtctgtcctgcagacggctgtggacgagttcaacaaggccaagaatgag
tttgctgccaaggctacagaggacgagatgcgtctccttcggtttcagcgaaagcttgat
gacgagaaaggggcgggccttctgggactgtctctacaggccaccatggaggctctgttg
actcttggacttcacaaacaggccgagcaactttacagagacttcaaggtcccagacaaa
aggtactggtggttgaagctgaagtctctggcagagaaggaggagtgggaggagctagag
aagttctcaaagagcaaaaagtctcccattggttacctggcttttgtggaagtttgcatt
aagtgtaacaacaagtacgaagccaagaaatacgtttccaaggtgacgcctgagcagaag
gtcaaagctcacctggccgttggggacatggagggggcggcagacgctgccatcgagcga
agaaacgactcggaaatggcggctgttctctccaggtgttccacctccgaccgcctcttg
attgacaggttgaaccgagcccgaacagctgctgccaaaaagtga
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