Mugil cephalus (flathead mullet): 125003420
Help
Entry
125003420 CDS
T08342
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03030
DNA replication
mcep03410
Base excision repair
mcep03420
Nucleotide excision repair
mcep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125003420 (rfc1)
03410 Base excision repair
125003420 (rfc1)
03420 Nucleotide excision repair
125003420 (rfc1)
03430 Mismatch repair
125003420 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125003420 (rfc1)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125003420 (rfc1)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125003420 (rfc1)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125003420 (rfc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
RuvB_N
Rad17
AAA_5
AAA_7
AAA_17
BRCT_2
AAA_14
AAA_18
AAA_33
nSTAND3
RNA_helicase
NTPase_1
AAA_19
TIP49
AAA_16
Motif
Other DBs
NCBI-GeneID:
125003420
NCBI-ProteinID:
XP_047433310
LinkDB
All DBs
Position
2:complement(23897029..23909131)
Genome browser
AA seq
1189 aa
AA seq
DB search
MMDIRRFFAPTSAKPAVQKPASNENVKPEKKKKKSPLSSDEEVKNKKKQTTKAKSPKAEE
QHKDGGKKRKKHAIIESDSEEEEVPVSKSKKSPKEKVKTKKAEPPPKKDPVQYVSETDSD
SDTFQSLKKVSKPNQRSGSKTSKSDAESPRSAPRGGVKSPPKPSATQGGKTGLKSPPLPA
TPKSAPPPPQPKQTPTSVLDYFGEGTVQRSDKKLVASTKRKAPTQDTDDLISDEELARQL
QLEEEMELEKQVHEDEEFAKTLAMLNEEPQAKKARKGSDERPGQTVTPKKGRANAAGSTS
SPSKPGRSASEAAISPSPKKNASPVKASSKLALMKRKDELKDEESKSKVTKNKISPKKEP
RDSAISDVKFTPKAGTTPTALKISPKKPESTSTSPEDMEKKKANTSAYRNYLNRDGPRAL
GSKEIPTGAENCLEGCVFVLTGVLESIERDDAKSLIERYGGKVTGNVSKKTTYLVLGRDS
GASKLEKAESFGTKILDEDALLELIRTKPGKKSKYEIAAEAESKAPKSRTPSTQTSKTTP
KSQKISPSKGNSRSPQTPSPSKTGLAQGHGSRTSDASTPSGRGSRHTARRELGLSSTSSS
SSSSTSTPAPSSSEEGASTLWVDKYRPRSLKTVIGQQGDQSCANKLIRWLQNWHRNHGGG
SASKPAAAKFGKFGGKDDGSGHKAALLSGPPGVGKTTTAVLVCEELGFSYVEMNASCTRS
KNSLKEVVAESLNNTSIENFYKGTSSTVSSKHVLIMDEIDGMAGNEDRGGIQEMINLIKT
SKVPIICMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGIKIPPPALNEI
ILASNQDVRQVIHNLSMWSAKDKVMTYDQCKADAASARKDMKLGPFDVCRKVFASGDETS
HMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGDMKAHLVLLSKAADSISQGDMVDR
RIRSGQNWSLLPTQAIYASVIPGELMRGYMSQFPVFPSWLGKNSSTSKHSRIVQELASHM
SLKTMSSRQAVNLDYLFYLRQALLSPLQKHGAEGAAQAVKLLDDYQLVKEDVDSIMEISV
WGGQADPYSKLDSKVKAAFTRLYNKEVHLTPYSLQAVKKGRRGGGGGESELGGEDGGQDG
GQESEEEGDGLKADAMIKQKKAKTTKESTKQKKEESGKGKGKGKGKGKK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatcaggcggttctttgcaccgacatccgctaaaccggcggtgcagaaacca
gcctcgaatgaaaatgtcaaacccgagaagaagaagaagaagagtcctctgtcttcagac
gaggaggtgaagaataaaaagaaacaaaccaccaaggccaaaagccccaaagcagaagag
caacacaaggatggagggaaaaagcgaaagaagcatgcaatcatagagtcagactcggag
gaggaggaggtgcccgtgagcaagtcaaagaaatctcccaaagagaaagtgaagaccaag
aaggcagagccgcctcccaagaaagacccggtgcagtacgtctctgaaacagactcggac
agcgacacctttcagagcctgaagaaagtctccaaacccaaccagaggagcggctccaaa
acgtcaaagtcagatgcggagagtcctcggtcggcacccagaggaggagtgaagtctcct
cccaagccttctgctactcagggggggaaaactgggttaaagtctcctcctctgcctgcc
acccctaagtcagcaccacctcctccccagcccaaacaaacccccacctcagtgctggac
tactttggcgaagggaccgttcagcggtcagacaagaaactggtggccagcaccaaacga
aaggctccaactcaagacacagacgacctgataagtgatgaagaacttgcaagacagctg
cagctggaggaggagatggagctggaaaaacaggtgcacgaagatgaggaattcgcaaaa
acactggcgatgctgaacgaggagccacaggccaagaaggctcgtaaaggctctgatgaa
agaccgggccaaaccgtaactcccaagaagggcagagcgaatgctgccggcagcacgagc
agcccttcaaagcccggccggagcgcgtcggaggccgcgatcagcccgtctcccaagaag
aacgccagccccgtcaaagccagctccaaactggccctgatgaagagaaaagacgagctg
aaggacgaagagtcgaagagcaaagtgacgaaaaacaaaatctcccctaaaaaggagccg
cgtgattctgcgatctcagacgtgaagttcacgcctaaagcgggaactacccccactgca
cttaaaatctcccccaagaaacctgagagcactagtacgagtcctgaggacatggagaag
aagaaagccaacacctcagcttacaggaactacctcaacagagatggaccacgagctctg
ggctccaaggaaatccccacgggggcggagaactgtctggagggctgcgtgtttgtgttg
acgggcgtcctggagtcgatcgagagagacgacgccaagtctctcatcgagcgctacgga
ggcaaggtgacgggaaacgtcagcaagaagaccacctacctggtgctgggcagagacagc
ggcgcctcgaagctcgagaaggcggagagtttcggtacaaagatcctggatgaagatgct
ctattggagctgatcagaaccaaaccaggaaagaagtcaaagtatgagatcgctgcagaa
gccgagagcaaagccccaaagagcaggactccctccacccagacgtcaaagaccaccccc
aagtcccagaagatctccccctctaaggggaactccaggtcccctcagaccccgagcccg
tcaaagaccggcctggcacaaggccacggctccaggacgtcagatgccagcaccccgtct
gggagagggtcgcgtcacactgcccggcgagagctgggtctctcctccacctcctcttcc
tcctcctcctccacgtcgaccccggccccatcgtcgtcagaggagggcgccagcacgctg
tgggtggacaagtaccggccgcgctccctgaagaccgtgatcggccagcagggcgaccag
agctgcgccaacaagctgattcgatggttgcagaactggcacagaaaccacggcggcggc
agcgccagcaaaccagcagcagcgaagtttggtaagtttggaggcaaagacgatggatcg
ggtcacaaagccgctctgctctccggacctcctggcgtggggaagaccaccacagctgtg
ctggtctgtgaggagctgggcttcagctacgtggagatgaacgccagctgcactcgtagc
aaaaacagcctgaaggaagtggttgcagagtcactgaacaataccagcatcgagaacttc
tacaaaggaacgtcttcgaccgtgagcagtaaacacgttctcatcatggatgagatcgac
ggcatggctggaaacgaggaccgtggaggaatccaggagatgatcaacctcatcaaaacc
tcgaaggttcccatcatctgcatgtgcaacgaccgcaaccaccagaagatcaggtctctg
gccaactactgcttcgacctgcgcttccagaggccacgggtggaacagatcaagggagcc
atgatgtctatcgctttcaaagagggaatcaagatcccgcccccagctctgaatgaaatc
attttagcttccaatcaggacgtccgacaggtgatccacaacctgagcatgtggtcggcc
aaagacaaggtgatgacgtacgaccagtgcaaggcggacgcagccagcgcccgcaaggac
atgaagctgggcccgtttgacgtctgcaggaaggtgttcgcctcgggggacgagacgtcc
cacatgagcctcatcgacaagtccgacctcttcttccacgactactcgctggcgccgctg
ttcgtgcaggagaactacctgcacgtccgtcctgccgctgctggcggggacatgaaggcc
cacctggtgctgctgagcaaggcggcggactccatctctcagggcgacatggtcgacaga
cggatccgctcagggcagaactggtctctgctgcccacccaggccatctacgccagtgtg
atcccaggcgagctcatgagaggctacatgtctcagttcccggtcttccccagctggctc
ggcaagaactcctccaccagtaaacactcccgcatcgttcaggagctggcctcgcacatg
agtctcaagaccatgagcagcaggcaggcggtgaacctggactacctgttctacctgcga
caggcgctgctgagtcctctccagaaacacggcgctgagggcgcggctcaggctgtgaag
ctgctggacgactaccagctggtcaaggaggacgtggacagcatcatggagatcagcgtc
tgggggggacaggccgacccctactccaaactggattccaaggtgaaggcggctttcacc
cgtttgtacaacaaagaggttcatctgacgccgtactccctccaagccgtgaagaagggg
cgtcgcggtggcggcgggggggagtcggagttgggaggagaggacggcggccaggacggc
ggccaggagtctgaggaggaaggggacggcctcaaagccgacgctatgatcaagcagaaa
aaggccaaaaccacaaaggagtcgactaagcagaagaaggaagaatctgggaaaggcaaa
ggcaaagggaaaggaaagggaaagaaatga
DBGET
integrated database retrieval system
