Mugil cephalus (flathead mullet): 125003494
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Entry
125003494 CDS
T08342
Symbol
aptX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125003494 (aptX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125003494 (aptX)
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
125003494 (aptX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
125003494 (aptX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
125003494 (aptX)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125003494 (aptX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125003494 (aptX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_6
CC190
zf-C2H2_4
DUF7066
Motif
Other DBs
NCBI-GeneID:
125003494
NCBI-ProteinID:
XP_047433414
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All DBs
Position
2:complement(14572854..14575933)
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AA seq
333 aa
AA seq
DB search
MPICWLISEEGNHKPIHLPHLQTVVVGRGPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GLNPTSVDSVVVGKDNEVKIKPGQQLHIVNHLYPYTVQFKADPTGNHSSTKRPRELTPED
SKSQGEAQKMKATKQTEKVSVPVSHGETTKTSEGAGHWSQGLKTSMQDPKMQIYKDDKVV
VIKDKYPKARHHWLVLPWQSIPSLKALRKEDCDLVKHMQQVADRMVEQCPDSSSLRFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVDSREVIQMLETHGKVMVKEGT
AELLKLPLRCHVCFKELPTIPALKLHLASHFPR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctgctggcttatcagtgaggagggtaatcacaaacccatccacctgcctcat
ttacagacagtcgtcgtgggcagagggccggaaacgacgatcaaagacaaaaaatgctct
cgacagcaagttgaactcaaagcagaatgcaacaaaggctatgtcaaggttaaacagctg
ggcttaaaccccacctctgtagactctgtggtggtgggtaaagacaatgaggtgaaaatc
aagcctggacagcagcttcacattgtcaatcatctttacccatatactgttcagttcaaa
gcggaccccacaggtaaccacagcagcacaaaaaggccacgagagcttactccagaagac
agcaagagccaaggagaggctcagaagatgaaagcaaccaaacagacagaaaaggtctcc
gtgccagtcagccatggagaaaccactaaaactagtgaaggtgctgggcattggagccaa
ggcctgaagacttcgatgcaagaccccaagatgcagatatacaaggatgataaagtggta
gtaattaaagataaataccctaaagctcgccaccactggctcgtcctcccatggcaatcg
attcccagtctgaaggctttgcgcaaggaggactgtgatctggtgaaacacatgcagcaa
gtggccgaccgaatggttgagcagtgtccagattctagctcgctacgcttccgcacaggc
taccatgccatcccaagcatgagtcatgttcatctccacgtgatcagccaagactttgac
tctccttgtttaaagaacaaaaagcattggaactcatttacaaccgactacttcgttgat
tcccgtgaggtcattcagatgcttgaaacacatggaaaggtcatggtaaaagaaggcacc
gctgagttgttgaaactaccactccgctgccacgtgtgtttcaaagagcttccgactata
ccagctctgaagttgcacctggcgtctcattttcccagataa
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integrated database retrieval system