Mugil cephalus (flathead mullet): 125003810
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Entry
125003810 CDS
T08342
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125003810 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125003810 (smarca5)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125003810 (smarca5)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
125003810 (smarca5)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
125003810 (smarca5)
RSF complex
125003810 (smarca5)
WICH complex
125003810 (smarca5)
B-WICH complex
125003810 (smarca5)
NORC complex
125003810 (smarca5)
BRF complex
125003810 (smarca5)
NuRF complex (fruit fly)
125003810 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
125003810
NCBI-ProteinID:
XP_047433963
LinkDB
All DBs
Position
2:16904410..16911690
Genome browser
AA seq
1046 aa
AA seq
DB search
MSESENCVEQREEQTELEDAGGAEEFSFDFNMAQEKSDCSDAGKESSSDAGPDGQDGSSS
PSSSKTKDSTPGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRI
KKDEKQNLLSAGDNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKTGKMRDYQVRG
LNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNE
FKRWVPSLRAVCLIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVI
DEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDS
WFDTNNCLGDQKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKI
LMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVV
LDKLLPKMKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAYNE
PNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRF
ITENTVEERIVERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKES
EITDDDIDAILERGERKTMEMKEKLSSMGESTLRNFTMDTENSSVYTFEGEDYREKKKVI
TNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEK
EILFYRKTIGYKVPRNPDMPNSAQIQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNK
RDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERG
EARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKE
SVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRG
PKSGSAQKRKSEGTPDGRGRRKKLKL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgaaaactgcgtggaacagcgggaagagcagactgaactggaagacgct
ggaggagccgaggagttttcttttgactttaatatggcccaggagaagtcggactgttca
gatgccgggaaagagtcttcctcagatgctggtcctgacggacaagatggatcttcctcc
ccctcctcatccaaaactaaagactctactccaggttatgaggagaaagtgcaaacagac
cggaccaacagatttgagtacctgttgaagcagacagagttgtttgctcatttcatccaa
ccagctgcacagaagacgcccacttccccgctgaagatgaaaccaggacgtccccgcatc
aagaaagatgagaaacaaaatctgctgtcagctggagataaccgccatcgccgcacagag
caggaggaagatgaagagcttctcaacgagagcacaaagacgacgaacgtgtgcactcgt
ttcgatgactctccgtcctatgtcaaaacaggaaagatgagggactaccaggtccgtggt
ctgaattggcttatttcgttgtatgaaaacgggatcaacggcatcctcgccgatgaaatg
ggacttggaaaaactctccaaaccatcgccctgctgggttacatgaagcactacagaaac
atccccggcccccacatggtactggttcccaaatccaccctctacaactggatgaacgag
ttcaagcgatgggtgccttctcttcgtgcagtctgcctgatcggagacagagacgagcga
acggctctgatcagagacgtgctgctgccaggagagtgggatgtgtgcgtcacgtcttac
gagatgctgatcattgaaaaggccgtgttcaagaagttcaactggcgatacctggtcatt
gacgaagctcacaggatcaagaatgaaaagtcaaagttgtcagaaattgtgcgtgaattt
aagaccaccaatcgtctgctgttgactggaacacctctacaaaacaacctccacgagctg
tgggctctgctcaacttcctgcttcctgacgtcttcaactcagcagatgactttgattcc
tggtttgacacaaacaactgcttgggtgatcagaagttggtcgagcgtctccacactgtc
ttgcgtcctttcttgcttcgtcgtatcaaagcagacgtggaaaagactctactgcccaaa
aaagagatcaagatgtatgttggcctcagtaagatgcagcgagagtggtacacaaagatc
ctgatgaaggacatcgacatcctgaactcggcgggaaaaatggacaagatgcgtcttctg
aacgttctcatgcagctgaggaaatgttgcaaccacccgtacctgttcgacggggccgag
cccggtcccccgtacacgactgacctccacctggtggtgaacagtggcaagatggtggtg
ctggacaagctgctgcccaagatgaaggagcagggttcacgtgtgctcatcttcagtcag
atgaccagggtgctggacatcttggaggactactgcatgtggaggaactatggttactgc
cgtctggatggccaaacgccacacgaggagagacagatctccatcaacgcatacaatgag
cccaacagctctaagttcatcttcatgctgagcaccagagccggtggtttgggtatcaac
ctggccacggccgatgtcgtcatcctctacgactcagactggaaccctcaagttgacctg
caggccatggaccgagctcacaggattgggcagcagaagcaggtacgcgtttttcgcttc
atcaccgaaaacacagtggaggagaggattgtggagagggccgagatgaaactgcgcctg
gactccatcgtcatccagcaaggaagacttgtggaccccagtgcaaacaagctgggtaaa
gacgagatgctgtccatcatccggcacggtgccactcacgtgtttgcttccaaagaaagc
gagatcacagacgacgacatcgacgccatcctggagcgaggtgaaaggaagactatggag
atgaaggagaaactgtcatcgatgggtgagagcactctgagaaacttcaccatggacacg
gagaacagcagcgtgtacacgtttgaaggagaagactacagagagaagaaaaaagtcatt
accaactggatcgagcctcccaagagagaaaggaaagccaattatgccgtggatgcctac
ttcagagaagccctgcgagtcagcgagcccaaagcaccgaaggctcctcgtcctcccaag
cagccaaatgtccaagacttccagttctttccccctcgtctttttgagctcctagaaaag
gaaatcctcttctacagaaagaccattggatataaggttccccgtaatccagacatgccc
aactcggctcagatccagaaagaggagcaggcgaagatcgacgaggccgaggctctcaca
gaggaagagctggaggagaaggagaaccttctccaacagggatttactatctggaacaaa
cgtgacttcaaccagttcatcaaagccaacgagaagtggggaagagatgatattgagaac
attgccagagaggtcgaggggaaaactccagaggaagtcatggaatattcagctgtgttc
tgggagcgctgcaatgagttgcaggatatcgagaagatcatggcccagatcgagagagga
gaagccaggattcagagaaggatcagcatcaagaaggccctggactcaaagatcggccgc
tataaggctcccttccatcagctccgtatctcatacggcaccaacaaaggcaagaactac
acagaggaggaagaccgcttcctcatctgtatgcttcacaagctgggctttgacaaggag
agcgtttacgacgagcttcgccagtgcatccgcaactcacctcagttccgcttcgactgg
ttcctcaaatccaggacggccatggagcttcaaaggcgatgcaacactctcatcacgctg
atagagagagagaacatggagctggaggagagggagaaggcagagaaaaagaaacggggc
ccaaagagtggatcggcccagaaacgaaagtcagagggaacccccgacggtcgaggtcgc
aggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
