Mugil cephalus (flathead mullet): 125004323
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Entry
125004323 CDS
T08342
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125004323 (tbc1d1)
Membrane trafficking [BR:
mcep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125004323 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125004323 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
125004323 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF2594
Motif
Other DBs
NCBI-GeneID:
125004323
NCBI-ProteinID:
XP_047434800
LinkDB
All DBs
Position
2:23697711..23746390
Genome browser
AA seq
1400 aa
AA seq
DB search
MEGLYFEVKSRKDEAPGPRSSDKPRPGLTPNRLSCPSFSHPTSSTQSLQRGAREGAKVED
EVEEEVRYKLTMIGSLPVHHLTTMPMLPWVVAEISRSQPAEKEPCAGVRCGVPLNPATRN
KTVFLCVSASWVRCVSVLGEGVLWSPLTHTVLFKCRPHQVTKLIHNSQEPCSFACLVKDT
PECACYVFRCQDSTKVPEIISTLRQAGKSSARNNDVAAVSAKTSTSSGDSDSSETCFSSF
SNATTSAAPAPVMSPTAFAKKFEVLFCGRVSVAHKKAPPALIDECIEKFSQLNSSAAADK
GGGLVGGLRRVLSFQSNGLGSGGGGAAGDGASGSPTLGTRHVLFKRDPSFPCLQALDENG
LSPEISNTNTTDPHARPADVQPTSLRENRTMLFTVGRSQIFLVSPDTKKVAIEKSFREIS
FCSQGIHHVDHFGFICRETVEGGNWHFVCYIFQCTDESLVDEIMLTLKQAFSVAALQQNA
KTQSQQCDSCPMQQLHRLCERIEGLHPSKTKLELQKHLATLDNQEQASVFENTVRARPKS
DQEENELVMASLRSLYEERQKSHQHTLPGDSKRACEDAAPAPLEAQQQSSSRQRLEQFKS
RAKRSLTESLEGIWKGSSKARAQRDNSEGSESGSSVCTVNSSQDQACLDDPLSSSSHLRP
TSPLRCHNSTGDLKDLDSSLPLSLSSSSLPGDARPQGFRRRASTFSHPPTPSSDLDCSPV
HVLIHSPKEPTAATKPKLVRHYSVSTETPHQSKNAPSDSALPPVPPYPSSNSPLLLRHPS
SPSAGARLSKRSPLGGLRARLHSSSSVPNFLKFQFLAPVQENDCPDLKKSDVAALSAPNS
ASCVGESPLRSHRHSWRQQIFLRVATPQKGTDANERGDPCLEGGHACMGLVVGGASGDST
IRAVPEERTKRSSEELRELWRKAILQQILLQRMERENQKLQASESDLQNKRLKLDYEEIT
PCLKEVTLVWEKMLGTSGRSKVKFDSETIHAAVAQGVPRQHRGEIWKFLSEQYLLRQTVP
SRPPSNHTPYKELLKQLTSQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNILKAYSLLD
PEVGYCQGLSFIAGVLLLHMGEEDAFNMLKFLMYDVGLRKQYRPDMIILQIQMYQLSRLL
HDYHRDLYTHLEQQEIGPSLYATPWFLTVFASHFPLGFVARVFDMLFLQGSEVIFKVALS
LLGSHKPLILQQDNLESIVDFIKTTLPNLGLVQMEKTINQVCEMDVSKQLQAYEVEYHVL
QDELLDTPPTLNQHQRAAQLERTNQSLRQQNLDLLEELQVSQARVCSLESRVEALVQAEG
RLQEQVTALEEEKEQLATTVTRLQELLSSLGIHSNQDGHTLPAASEQHAGAAASKLDGRE
GLDKRTVDALHQTLLLPKAS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcctgtattttgaagtgaagtcaagaaaagacgaagccccgggccctcggagc
tccgacaaaccccgtccgggtctaactccgaaccgtctctcctgcccgtccttttcccat
cccacctcctccacgcagagccttcagagaggcgcgagagagggagcgaaggtggaggat
gaagtagaggaggaggtacggtacaaactgacaatgatcggttctctgccggtgcaccat
ctcaccaccatgcccatgctgccctgggtggtggctgaaatcagccggtctcaacctgca
gagaaggagccgtgcgccggggtgcgctgtggtgttcccttgaaccctgccacacgcaac
aagacagttttcctgtgcgtgtcggcgtcgtgggtgcggtgtgtgtccgtcctgggagag
ggagttctctggagccccctgacgcacacggtgttgtttaaatgtcgtcctcaccaagtg
accaagctaattcacaacagccaggagccctgcagctttgcctgtctggtgaaggacacg
ccagagtgtgcctgctatgtcttcaggtgccaggacagcaccaaggtccctgagatcatc
agcacgttgaggcaagccggcaaaagctcggcgcgcaacaatgacgtcgccgccgtctcc
gccaagacgtccaccagctccggagacagcgactcctccgaaacgtgcttctcctccttc
tccaacgcgacgacctcggcggcgcccgctcccgtcatgtctccgacggccttcgccaag
aagttcgaggtgctgttctgcggccgcgtgagcgtcgcccacaagaaggccccgcccgcc
ctgatcgacgagtgcatcgagaagttcagccagctgaacagctcggcggccgccgacaaa
ggcggaggattggtgggggggctgaggagggttttgagcttccagtccaacgggctggga
agcggtggcggcggcgccgccggtgacggcgcttcggggagccccaccctggggactcgt
cacgttctcttcaagagggaccccagcttcccgtgtctgcaagctctggatgagaacggc
ctttcaccggagatttccaacaccaacactactgatccgcatgcccgccctgctgacgtg
cagcccaccagcctgagggagaacaggaccatgctgttcacggtgggcaggtctcagatc
ttcctggttagtccagacactaagaaagttgccatagagaagagtttcagagaaatctcc
ttctgctcacagggtattcaccatgtggatcacttcggcttcatctgcagggaaacggtt
gaagggggaaactggcactttgtgtgctatatcttccagtgtactgatgaatcactggtg
gatgagatcatgctgaccctgaagcaggcgttctctgtcgctgccctgcagcagaacgcg
aaaacccagagccagcagtgtgacagctgccccatgcagcagctccaccggctctgcgag
cggatagaaggtctgcacccatctaaaaccaaactggagcttcagaaacacctggctacg
ttggacaaccaggagcaagcttctgtctttgagaacaccgtgcgggctcgtccaaagagc
gatcaggaggagaatgagctggtgatggcctctttaaggagcctgtatgaagagagacag
aagagccatcagcacacactacctggagacagcaaacgggcgtgtgaggatgcggctccg
gcacctctggaggctcagcagcagagcagcagtcgacagcgactcgagcagttcaagagc
cgagccaagcgctcgctcaccgagtccctggagggcatctggaagggaagcagcaaggcc
agagctcagagggacaacagcgagggaagtgaaagcggctcctctgtctgtactgtcaac
agcagccaggaccaggcctgtctagacgaccccttgtccagctcctctcatctacgaccc
accagcccactcaggtgccacaactccacaggagacctgaaggacctcgatagctctctt
cccctgtcgctctcctcctcctcgttgcccggcgacgcccggccgcagggcttcaggaga
cgggccagcaccttcagccaccccccgactccttcctccgatctcgactgctccccggtg
cacgtgctaattcactcaccgaaggagccgacagcagccaccaagcccaagctcgtacga
cactactccgtcagcacagagacgccacaccagagcaaaaatgccccctccgactctgcc
cttcctcctgttcctccctacccttcatccaactctcctctcctcctccgccatccttcc
tcaccttctgctggagcccggctcagtaagagaagtcctctcggtggtctccgtgcccgt
ctccactcctcctcctctgtccctaattttctgaaatttcaatttctggcccctgttcaa
gagaacgattgtcccgacctgaaaaagagtgacgtagcagctctctctgcgccaaattca
gcatcttgcgtaggggaaagtcctctacgcagccaccgccactcatggaggcagcagatc
ttcctacgggtcgctacgcctcaaaaaggcacggacgccaacgagcggggggatccctgt
ttagaagggggccatgcgtgcatgggcctggtggtgggcggagcgagcggggactcgacc
atccgagcggtgccggaggagaggacgaagaggagctcggaggagctgagggagctgtgg
aggaaggccatcctgcagcagatcctgctgcagaggatggaaagagagaaccagaaactc
caagcctcagagagcgatctgcagaacaagcgtctgaagttggactatgaggaaatcaca
ccgtgtctgaaggaggtcactctggtgtgggagaaaatgctgggaacttctggaagatca
aaggtcaaatttgactctgagaccatacatgctgccgttgcgcaaggcgtcccgaggcag
catcgcggcgagatctggaagttcctctccgaacagtacctgctcagacagacggtccct
tcccgacccccctccaaccacactccgtacaaggagctgctgaagcagctcacctcgcag
caacacgccatcctcatagacctgggtcgcacttttcccactcatccgtatttccaagcc
cagctgggggcaggacagctgtctctgtataacatactgaaagcgtactcgctgcttgac
cctgaggtgggctactgccagggcctgtccttcattgctggagtgctgcttttgcacatg
ggggaggaggacgccttcaacatgctcaaatttctaatgtatgatgtagggctgcgcaaa
cagtaccggcccgacatgattatcctgcagattcagatgtaccagttgtctcggctgctc
cacgactaccaccgagatctttacacccaccttgagcagcaggagatcgggcccagcttg
tacgccaccccctggttcctcaccgtgttcgcctcgcacttccccctcggcttcgtggcc
agagtctttgatatgttgttcctgcagggctcagaggtcatcttcaaggtggccttgagc
ctgctggggagccacaagcctctgatcctgcagcaggacaacctggagtccatagtggac
ttcatcaagacgacgctgcccaacctgggcctggtgcagatggagaaaaccatcaaccag
gtctgcgagatggacgtgtccaagcagctccaggcctacgaggtcgagtaccacgtgctg
caggacgagctgctggacacgccccccaccctcaaccagcaccagcgagccgcccagctg
gagaggacgaaccagagcctccgacagcagaacctcgacctgctggaggagctgcaggtg
tcccaagctcgcgtctgcagcctggagagccgagtggaggcgttggtgcaggccgagggc
cggctccaggagcaggtcaccgcgctggaggaggagaaggagcagctggcgaccacggtg
acgcgcctccaggagctcctcagcagcctcggcatacactccaaccaagatggacacaca
ctccccgcggcgtccgagcagcacgcgggcgccgcggcgtcaaagctggacggccgagag
ggactggacaaacggacggtggacgccctgcaccaaacgctgcttctcccgaaggcttcg
taa
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