Mugil cephalus (flathead mullet): 125004542
Help
Entry
125004542 CDS
T08342
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125004542 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125004542 (herc3)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125004542 (herc3)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
HECT type E3
125004542 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
125004542
NCBI-ProteinID:
XP_047435165
LinkDB
All DBs
Position
2:16411974..16438760
Genome browser
AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGAERNPVFEPRNCHVFSGRGLKEVACGGQHSLFLLNDGSVYTCGSN
SCGQLGHDKVGMSPELVGALDTQKITMVSCGRDHSMAVNEQGQVFAWGAGDGGQLGLGAA
EAAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKAGFLTGHFLRKETKQYTVI
RIICGGDHSFLLYSNEQSSVAPEDFRVINIGKSLSPINYERLNSWRLKLMYNTDSTVTND
IVIQLSSAACWNASFLDQSDDTHFKTNPKIPGIDLNSVRMLFETLSKPAYSGLLEQATKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDGGVFTRMVDMYKSIVVFMLTGGKTLLVPVFYENYFVATLQLLEKLHKVNLKAH
HVEYNRFYIPDISSLVDIQEDYLKWFLSKAEIKMGSSPSQSDFPSVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYNDSNLLWFSDKCF
VEENWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVLPTLDDFKELSPTEARSLQQLL
DYEGSDVEETFLLNFAITRENYGMTEVKELIPGGESVNVDQNNRKEFVEAYLRYVFSDSV
DEQYAAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgccaaggatgggcagttgggtatcggcgcggagaggaaccca
gtgtttgagccaaggaactgtcatgtgttcagtggaagaggattgaaagaggtcgcctgt
ggggggcaacactcgctgttcctgctgaatgatggcagcgtgtacacatgtggctctaac
agctgtggacagctgggccacgacaaagtggggatgtccccagagctggtcggggctctg
gacacccagaagataactatggtgtcgtgcggtcgggaccattcgatggcggtgaacgag
cagggtcaggtgtttgcctggggagctggggacggcggacagctcggcctgggggctgca
gaggcggccgttcgaatcccaaggttggtcaaaagactgtgcgaccatcgcatctcccaa
gtaatgtgtgggaaccagcactgcatcgcactttctagagatggccagctgttcacgtgg
ggccagaacaccagcggccagctcggcctggggaaaggagagcccagcaaactgttccct
catcctctgaagtctctggcggggattcctctggcgcagataacggctggaggagaccac
agcttcgcgctgtctttgtccggagccgtgttcggctggggcaaaaacagagctgggcaa
ctgggcctcaatgataaacaagatcgcgccgtcccgtgccacatcaaatttttgagatct
caaaaagtagtttacatcagctgtggagatgaacacacagcggccctcacaaaggatggc
ggcttgtttacctttggtgatggttcgtggggtcagctgggtcacggctccaccaataat
gaacttttacccagacgagtgctggagctcatgggtacagaggtctcccagatcacctgt
ggcaggcaccacacgttggcgtttgtaccttcctctggtgtggtgtatgcgtttggctgt
aacagccacggtcagctgggcacaggaatactgggagacgccaggagcccgtttcccgtc
aaggccggtttcctgacaggacacttcctcagaaaagaaacaaaacaatatacggtgatc
agaatcatctgtggaggagaccatagtttcttattgtactcaaatgagcagagttcagtc
gccccagaagacttcagagtgatcaatatcggtaaaagcttgtccccaatcaattatgaa
aggttaaactcctggaggttgaaactgatgtacaacacagactctactgtcactaacgat
atcgtaattcagctctcctcggcggcttgttggaacgccagcttcttggaccaaagtgat
gatacgcacttcaaaaccaacccaaagatccctggcatcgacctgaactctgtcaggatg
ttgtttgagactctcagcaaaccggcctactctggactcctggagcaggcgacaaagagt
ttcgagagtctgttgatcccccagctgccacgctcccctccagatgtcgaagccatgagg
atctacctcatcttgtctgagtaccccgccctgcaggactccaagaactacatccgcctc
actatacccctggcgatggccattctccggctagacgccaaccccagcaaagtattggac
aactggtggtgttttgtggacggcggcgtgttcaccaggatggtcgacatgtacaagagt
attgttgtgtttatgttaactggaggaaagactctgctcgttcccgtgttctatgaaaac
tattttgtcgccacgctacagctgctggagaaactccacaaggtaaacctgaaggctcac
catgtggagtacaatcgcttttatattcctgacatctccagcctggtggacatccaggaa
gactacctcaaatggtttctgagtaaagctgaaattaaaatgggatcatccccttcacag
agtgactttccctcagtgaacctatgtgcctatccgttcatcctgaacgcccaagccaag
acaaccatgctgcaaacagatgctgagctgcaaatgcagatggcagtaagcggtgcaaac
ctgcacaacgtctttatgctgctcacactggaaccccacctcgctaggaacccttacctg
gtgctccacgtacgcaggaaccatttagtgagcgacactcttcgtgagctcaccatgtac
tctgacgtggacctcaagaagcctctcaaggtgatctttgatggtgaggaggccgtagac
gcgggcggagtcactaaagagtttttcctgctgctgttaaaggagctgatggatcctgtg
tatgggatgttcacgcattacaatgactccaacctgctgtggttctcagacaaatgcttt
gtggaggagaactggtttcacctgattgggatcatctgcggtctggccatctataactcc
acagtggtggacctccacttccccctggctctctacaagaagctgctggacgtcttaccc
acactggacgacttcaaagagctctcacccactgaggccaggagtctacaacaactttta
gactatgaaggcagtgatgtggaggagacatttcttctcaactttgctatcaccagggaa
aactacgggatgacagaagtgaaggagctgatcccgggaggagagagcgtcaatgtggac
caaaacaacaggaaggagtttgtggaggcgtacctgcgctacgtgttctcagactcggtc
gacgagcagtatgcggccttctcctctggtttcctgaaggtgtgtggaggggagatcctg
tctctgtttcagccctccgagctgatggccatggtcgtcggcaacaacaactacaactgg
gaggagatggagaagaatgccgtttacaaaggcgaatacacggccactcacccaacagtc
agattgttctgggaggttttccacgagttcccactggagaagaagaagcagttcttattg
ttcctgaccggcagcgaccgcatccccatccacggcatggagagcctgcgcatcgtcatc
cagtccaccaccgcagaggagcactacctgccggtggctcacacctgctacaacctgctg
gacatgccccgctaccagaccaaagagatcctacgccgccgtctcactcaggctgtggag
cagtacgagggcttcagtctggtctaa
DBGET
integrated database retrieval system
