Mugil cephalus (flathead mullet): 125004743
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Entry
125004743 CDS
T08342
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125004743 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125004743 (taf5)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125004743 (taf5)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125004743 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
125004743 (taf5)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125004743 (taf5)
STAGA complex
125004743 (taf5)
TFTC complex
125004743 (taf5)
SAGA complex
125004743 (taf5)
SLIK complex
125004743 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
VPS8_N
CDK5RAP3
PROPPIN
eIF2A
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
125004743
NCBI-ProteinID:
XP_047435569
LinkDB
All DBs
Position
2:7604426..7608917
Genome browser
AA seq
750 aa
AA seq
DB search
MAAVQGGQSDAVEEKDIKSEPATDGFGNNNANDGRLPSASPGSSAPAGSNKTPAEAPEDR
QTLLAVLQFLRRNKLSESVEILRREAGLPEESLDQKGTDPSGAGTGGAAGGVDVEGGDAG
SLLSRVTVSAPVAVQAPTKATAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKRFIESVL
DCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSSLTKKE
HMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSK
SQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDS
MGSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYSFLNA
YQGLTAVDFTDDSSLVAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRMFSGHLADITCTRFHPNANYVATGSSDR
TIRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKG
HTDTIYSLKFSRDGEILASGSMDNTVRLWDAIKAFDDLETDDFTAATGHIHLQDNSQELL
LGTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggcggacagagcgacgcggtcgaagaaaaagacataaaatcagaa
ccagcaacagatggctttggaaataataatgcgaacgacggcagactaccctcggcgtcc
cccggctccagcgctccggctggaagcaacaaaaccccggccgaagctccggaggaccgg
cagacgctgctggcggtcttgcagttcctcagaaggaacaaactgagcgagtccgtcgaa
atattacgtcgtgaagcgggtttaccggaagagtcactggaccagaaaggaacggatccg
tccggagcaggcacgggaggtgctgcgggcggtgtggacgtagaaggcggggatgctggc
tctcttctcagccgggtaaccgtctctgccccggtcgcagttcaggcgccaactaaagct
acagctggagaagatcagccggacgtcaacgtcgtgctgtcggcctacagccagcaagga
gatccggctctgtacgaggtttactacagcggccttaagaggttcatagagtcagttttg
gattgtcacagagcagaactgtcccaggtcttctacccgctgttcgtccacatgtatctg
gaactggtgtacaacaatcatgaaagtgaagccaaggccttctttgaaaaattcagcggg
gaccaggagtgctactatgaagacgacttgcgtgttctatccagcctgacgaagaaggaa
cacatgagaggcaacgagaccctgctggacttccgcaccagcaagtttgtcctgcgaatc
tcccgagactcctaccagctcctgaagagacacctgcaggagcgccagaacaaccagatc
tggaatattatccaagagcacctctacatcgacatctttgatggcatgccacgcagcaag
agccagatcgatgccatgtctggcagcttggcaggagaggccaagcgagaggccaataag
gcaaaggtttactatggtttactgaaagaaccagaaatcgagctgcctcttgacgacgag
gacgaggaggctgagaatgaggagggtaaacccaagaagaagaagcccaaaaaggacagc
atgggttccaagagcaagaagcaggaccccaatgctccttcacagactaggatccccctg
ccagaattaaaggactcagacaagctagacaagatcatgtacatgaaggaagccaccaag
aggatccgtctgggaccagataacctcccctccatctgcttttattcttttctcaacgcg
taccagggcctgactgcagtggacttcactgacgactccagcctggtggccgggggcttt
gctgactccacagtacgagtgtggagtgtcacgccaaaaaagctgcgcaaggtcaagtct
gcagcagacttgaatctgattgacaaagagtcagacgatgtgctggagaggatcatggac
gagaagacagccagcgagtccaagatactctacggacacagcgggcccgtgtatggcatc
agcttcagcccggacagaaactacttgctgtcaagttctgaggatggtacagtcaggtta
tggagtctccaaacatttacttgtttggtgggctacaaaggccacaactacccggtgtgg
gacacacagttctctccctacggatactattttgtctctgggggccatgacagagtagct
cgtttgtgggcgactgatcactaccagcctctgaggatgttttctggtcacctagctgac
atcacttgcactcgttttcaccccaacgcaaattacgtggccacagggtcgtccgaccgc
accatccgcctctgggacgtcctaaatggaaactgtgtccgcatcttcactggtcataag
ggtcctatccatgcactggctttctctcccaatggaaagttcctggcctcgggagccact
gatggccgagttcttctgtgggacatcggccatggcctgatgattggggagctcaagggc
cacacagataccatctattccctaaagttcagcagggacggcgagatccttgcctctggc
tcaatggacaacacggttcgactgtgggacgcaattaaagcatttgatgatttagagacg
gacgacttcacggcagctacaggacacatccatctacaagataactcccaggagcttctg
ctcggcacctacatgactaaatctacacccgttatacacttacattttactcggaggaac
ctgcttcttgccgccggagcctataatccttga
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