Mugil cephalus (flathead mullet): 125004907
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Entry
125004907 CDS
T08342
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04137
Mitophagy - animal
mcep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125004907
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125004907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125004907
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
125004907
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125004907
Multi subunit type E3
ERAD complex
125004907
LMBR1L-GP78-UBAC2 complex
125004907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
125004907
NCBI-ProteinID:
XP_047435687
LinkDB
All DBs
Position
3:complement(12409426..12419608)
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AA seq
619 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFSALEPEETPAPSEMDLDHL
NSDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFSVATAEELAANDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGAQARSQQQSGGLEENIGPVGAAPDARPHINHF
FHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQDLQ
LTRSVEVTTDNILEGRIQVPFPTQAIERGPLQVNPSSDEQAGPSGAADQGLSELDNMEVR
GGRFSKSAEERQKMLKQRKEEMIQEARRKFLNKSPEEQDDDLPGLEEDMLPDLDLTVLRR
STMAAAAERRMQTQQDPSP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttttggagaggtttccttggcccagcctgcagacctacacagccctg
agtgtggctttgcttgctggcagcatcttcagtgcctacaccactgtcactgatccaggg
tttagtgccttggaaccagaagaaacaccagctccatctgaaatggatctggaccatctg
aacagtgatattagtaacacagaattagcaaccactgtcctgtggtaccttgtcactgac
agtctttttgtttgggtattggtgaacactttctgctgctctttgatgttaattgcaaaa
atgattcagtatgtggtgtttggcccgctaagagtcagtgagaagcagcacctgaaagat
aaattttggaacttcatcttctacaagttcattttcatctttggcgtactgaacgtgcag
acagtggaggaggtagtcatgtggtgcttgtggttctctgccctggtctttctccatctc
atggttcagctctgcaaagaccgttttgaatatctgtccttctcgccctccacaccgatg
aatagccatgttcgggtgctttgtctgctggtctccctgctgctggactgctgtggcctg
gctgtggtctgtggtctgctgggagcttctcatggcatgcacacgctctcctttatggca
gcagagtgtttgctggtgaccgtgcgcactggacatgtcatcatgcggtactccatccat
ctgtgggatttgaaccatccagggacttgggaaagtaagggaacgtatgtctactacacg
gacttcataatggagctggccatgctctttttggaccttatgcaccatattcatatgctg
ctttttggtaacatctggctgtccatggcgagcttggtcatcttcatgcagttgcggtat
cttttccatgaggtccagcggcgcgtccgacgacacaagaactaccttcgcgttatcaac
aacatggaggccagattttctgtcgccactgccgaggagctggcagccaatgatgatgac
tgtgccatctgctgggatactatgttgacggcacggaaactaccctgcggtcatctcttc
cacaactcatgtctgcgctcttggctggagcaggacacgtcgtgtcccacgtgtcgtaca
tccctgaacattaacggggacggggcccaggcgagaagccaacagcagagtggaggtttg
gaagagaacatcggcccagttggagctgctccagatgctagacctcacatcaaccacttc
ttccactttgatgggtctcgtattgccagttggctgcccagtttctcagtggaagtaatg
cacactactaatatcttgggcatcgctcaggccaacaactcccagctaatggccatggcc
catcagattcaggaaatgttccctcaggtgccgtcctacttggtaatgcaggacctgcag
ttaacccgctctgtggaagtcaccactgacaatatcctcgagggacgcattcaggtgcct
ttcccaacacaggctatagagcgtggccctctgcaggtcaacccttcatcagatgaacag
gcagggcccagtggagcagctgatcagggcctcagtgagctggacaacatggaggtcaga
ggaggccgcttctccaaatcagccgaggagaggcagaagatgttaaagcagaggaaagaa
gaaatgatccaggaagcacgcaggaaattcctgaataagagtccagaggaacaggatgat
gatttacccggactggaggaagacatgctcccagatttggacttgactgtgctgagacgt
agtaccatggcagcagctgcagagagacgcatgcaaacccaacaagacccttcaccctga
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