Mugil cephalus (flathead mullet): 125005025
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Entry
125005025 CDS
T08342
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04350
TGF-beta signaling pathway
mcep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125005025 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125005025 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125005025 (neo1a)
Cell adhesion molecules [BR:
mcep04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125005025 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
NDNF
Tissue_fac
C2-set_2
V-set_CD47
Sp38
SusE
FlgI
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
125005025
NCBI-ProteinID:
XP_047435882
LinkDB
All DBs
Position
3:complement(21071605..21231597)
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AA seq
1508 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTETTAAKHVDKGSAARPFDPFWFTVEPQDTLAIRGSSALLN
CSVHSDGATPAHIEWKKDGTFMSLVSDERRNILPDGSLFFSHVVHSKHNKPDEGTYQCVA
TIDNLGSIFSRTARLSVAGMPRFASQPLPSTVRLGDSQVMACEVNSDLVPFTRWEKDRQP
LELSARLVQLPSGALVISNASEGDAGLYRCLVENVGSSKTSDEAQLQTLPETGEDRKLEF
LVQPAPVAKMMGATVLLPCVVTGYPAPHVRWMFGDKLLEESDGRVEVLGGGSLQISNLTE
VDAGVYTCVAENYNSTIEAQAQLTVQVPPQFVKRPPNIYAHESMDIVFDCEVTGTPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPSFPPPSLTPNTTDHVTPGSGGVASPPGPTPSGPRDVVASLVSTRFIKLTWRPPAEPH
GDELTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGPGESSAV
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGEILTYKLYYTDKSVGNEQDV
EADGQSYTMTGLKKNTEYSFRVVANNRHGSGVSTEDVTVRTLSDVPSAPPQNLTVEVQNS
KSIMLRWQPPPLSGQNGEITGYKIRYRKGSRRSETAETTGGTQLYKLIDGLERGTEYSFR
VSAMTVNGTGPATEWTTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAITR
PQSDPIDPDVDLYELFHAPYTPVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKI
TDNRYYTVRWKTNIPANTKVKMANTTSLNHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQA
SNLPSKPGPPSNPGTDPDSGLPLGKSGIGGGENHILVIVIIISVGAFTIIVVVVGAFLCT
RRTTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPETNPVMTET
PIPRSSQDITPADSGLESNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPP
QPVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHSGHPRPHACATPISHLDRVDSTESVR
NTPSSEPLPPAAASSQASCPSEILADPEGSYHGSTTTEEEPSYSSNLPPHRSAHPHAHAH
PLKSFAVPAIPATGHPSYESPALPSTPLLAQTGPPTHPHIVKTASIGTLGRTRTPMIVTV
PNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKD
LNAITTAP
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctcttctctgtctcacctttctctacacg
gagaccaccgccgcaaagcatgtcgacaaaggttcagcagcgcggcccttcgaccccttc
tggttcacagtggagccccaggacacactggccattcggggaagctcggcactgctcaac
tgctcggtgcacagcgacggggccacgccggcacacatagagtggaagaaagacggcacc
ttcatgagcctggtttcagacgagaggcgaaacatacttcccgatggctcgctgttcttc
agccacgtggtgcactccaagcacaacaagccggacgagggcacctaccagtgtgtcgcc
accatcgacaacctgggatccattttcagccgcacggcgcgcctctccgtagcagggatg
cccaggttcgccagtcagccccttcccagcaccgtgcgtctgggggacagtcaggtgatg
gcgtgcgaagtcaactcggacctggtgcccttcacccggtgggagaaagaccgccagccg
ctggagctgagcgcccggctggtccagctgcccagcggagccctggttatcagcaacgcc
tcggagggcgacgctggcctctaccgctgtctggtggaaaatgtcggctcttccaagacc
agcgacgaggcccagctccagaccctgccagaaaccggagaagacaggaaactggagttc
cttgttcagcctgcgcctgtagccaagatgatgggcgccaccgtgctgctgccctgcgtg
gtcaccggttaccctgcgccgcacgtccgctggatgttcggagacaagctgctggaagaa
agtgatggtcgcgtggaagtcctgggaggaggcagtctccagatttccaatctcacggag
gtggatgccggcgtctacacctgtgtggcggaaaattataactccaccattgaagcccag
gcccagctcacagtgcaagtccctccgcagtttgtcaagcggccgcccaacatttatgcc
cacgagtccatggacatcgtctttgactgtgaggttacggggacgccggctcccaccgtc
aagtgggtcaagaatggagacgcggtcatccccagcgactacttcaagataattaaggag
cacaacctgcaggttctgggtctggtcaagtcagacgagggtttctatcagtgccttgcg
gaaaacgatgcaggaaacatccagtccagcgcccagctcatcatcttggatcatgatgta
gccctgccctctttccctcccccctcactgactcctaacactactgaccatgtaacgcca
ggctccggcggtgtggccagtccgccaggccccaccccctccggccccagagacgtcgtg
gcctcgctggtttccacccgcttcatcaagttgacttggcggccaccagccgagccgcac
ggcgacgagttaacctactctgttttctacagccaggagggcaccagcagggagcgagta
gtaaacaccagccgtccaggggagatgcaggtcaccatccagaacctcatgccagacacc
aaatatcgcttcagggttgtggctcacaacagcaacggtccgggcgagagctctgctgtc
ctcaaagtggccacccaggctgaagttcaagtgcccggcccggctccaaacctgcaggca
gtgtccaacacaccgacctccgtttctctcagctgggacaaacccctcactggcaacgga
gagatcctcacttacaagttgtactacacagacaaaagcgtcgggaacgagcaggacgtt
gaggccgatggtcagtcttacaccatgaccgggctgaagaagaacacggagtacagtttc
cgtgtggtggccaacaacagacacggctcgggtgtttccaccgaggacgtcactgttcgc
acgctgtctgacgtaccaagcgccccacctcagaacctgactgtggaagtgcagaactca
aagagcatcatgctgcggtggcaacccccacccctgagtggccagaatggcgagatcacc
ggctacaagatccgatatcggaaaggatctcggaggagtgaaacggccgagaccacagga
ggcacccagctgtacaagctcattgacggtctggagcgcgggacggagtactccttccgg
gtgtcggccatgacggtgaacggcacaggaccggccaccgagtggaccacagcagagacg
tttgagagcgacctggacgaatcacgcgtcccggatcagcccagctcgctgcatgtccgg
cccctcgtcaacagcatcgtcgtgagctggacgccgccggagaaccaggacattgtggtg
cgcggttacaccatcggctatggcatcggcagcccccacgcccagaccatcaaagtcgac
tacaagcagcgctactacaccatcgagaacctcgaccccagctcccactacgtgatcacg
ctgaaggccttcaataacgtgggcgaggggattcccgtgtacgagagcgccatcaccaga
ccgcagtcagaccccatagaccccgatgttgatctgtatgaactcttccatgctccatac
accccagtacccgacccttcacctatgatgccgcccgtgggtgttcaggcctctgtgctg
agtcacgacaccatcaaggtgacctgggccgacaactcgctgcccaagaaccaaaagatc
acagataaccgctactacacggtgcgatggaagaccaacatccccgccaacactaaagtc
aagatggccaacacgaccagcctgaaccacatggtgacgggcctgaagcccaacacgctg
tacgagttctccgtcatggtgaccaagggccgccgcaccagcacatggagcatgacagcc
cagggcaccacctttgagaccattcccagctcctccccgaaagacgtgactgtggtgagc
aaagagaacaaacctcgcaccataattgtcaactggcagcctccctctgaggccaacgga
aaaatcacgggctacatcatctactatagtacagatgtaaacgccgaggtccacgactgg
gtgattgaacccgtggtgggaaatcgcctgacgcaccagatccaggagctgacgctggac
accacctactacttcaagatccaggccagaaactcaaagggcatgggccccatgtccgag
gccgtgcatttccgcacgcccaagactgagtcctctgacaaaatggctaatgaccaagcc
tcaaatcttccgtcgaagccggggcctccaagcaacccgggtaccgacccagactctgga
ttgccactcggtaaatcagggatcggaggcggtgagaatcacatcctggtcattgtcatc
attatctccgtgggagcctttaccatcatagtggtggtggtgggggctttcctgtgcacg
cgccgcaccacgtcccaccagaaaaagaagcgggccgcctcgaagtcctcaaatggctcc
cacaaatacaaaggaaactccaaagatctgaagcctccggatctgtggatccatcacgag
aggctggagctcaagccgatggacaagtcgccggagaccaacccggtcatgaccgaaacg
ccaattccccgctcctcccaggacatcacacccgccgacagcggcctggaaagcaacccg
cacctgcagcagaggcgcaactcataccgcggccacgagtcagaggacagcatgtctaca
ctagcaggccgacgagggatgaggcctaaaatgatgatgccttttgacgcacagcctcct
cagcctgtgattagtgctcaccccatccattcccttgataaccatcaccaccattatcac
atgggcagcctggcgtcgccgacacgcagctatctctaccacagcgggcacccacgccct
cacgcctgcgccacccccatctcccatctagacagggtggactccacagagtccgtgagg
aacacccccagctcggagccgctccctccggccgccgcctcctctcaggcctcctgcccc
tcggagatcctggccgaccccgagggcagctaccacggctccaccaccacagaggaggag
cccagctactccagcaacctgcccccgcaccgctcggcccacccgcacgcccacgcccac
ccgctcaagagcttcgccgtgcctgcaatcccggccaccggccatccgtcgtatgagtcg
ccggcgctgccgagcaccccgctgctcgctcagaccggtcctcccactcacccccacatt
gtcaaaacagcctccatcggaacgctgggaaggacacgaacaccgatgatagtcactgtg
cccaacgcccccgatgtgccagagaccagcaagatgctggaagatgtagacagcgtgctt
gcctccctccccccctgcccctctcccgccccccgcagtaaccctgttcctctccctcag
agctacgagcccgacgagctgaccgaggagatggcccacctcgagggcctcatgaaggac
ctgaacgccatcaccacagcgccatga
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integrated database retrieval system
