Mugil cephalus (flathead mullet): 125005035
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Entry
125005035 CDS
T08342
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125005035
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125005035
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125005035
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125005035
Cell adhesion molecules [BR:
mcep04515
]
Cadherins
Protocadherins
125005035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Big_9
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
125005035
NCBI-ProteinID:
XP_047435915
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All DBs
Position
3:24476679..24681652
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AA seq
1236 aa
AA seq
DB search
MDLKDYYLLGALLACIWLDPSIAQELIYPIREELQENMLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVRDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNKPVFKESQIEVHIPENSPIGTSVVQLQATDADIGANAEIHYVFGTQVPPATKR
LFALNTTSGLITVQRPLDREETAIHKLSVLASDGSSSSARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPVVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKSDDPAHEPIN
GTISLPTELDEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGTYQQPKSPVSSFGSQREWGPKEKLLNGHTLTRTWKNESGRSEHFGDRKQFG
SGEGHFTSSGMADIPLVSLKSCQPASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgttgggcgccctacttgcctgcatatggctagaccct
tcgatagcccaggagctcatctaccccatcagagaggagctgcaggaaaatatgcttatt
ggaaacataccaaaggacctaaacatttcccacactaatgctgccactggagcaagtgct
aatcttgtgtaccggctcgtatctaaagcaggagataacccactggtccgcgttctgagc
agcactggggagatattcacgacatcaaaccgaatcgacagggagaagttgtgccccggc
ccctcgtttgaggacagcgagtgctcctttgaaatcgaggtggtcatcctgcctaatgat
tatttcaggctgattaagatcaaaataatcgtcagggacacgaatgataatgcccccatg
tttccgtcccctgtgatcaacatctccatcccggagaacacgctcattaacagccgtttt
gctattccgtccgccactgacccggacactggccccaacagtgtccacaaatacgagctg
atcaacgggcagagtgcgttcggcttagacatcgtagaaacgcctgagggggagaagtgg
cctcagctcattgtgcagcagaatctggacagagagcagaaggatacgtatgtgatgaag
attaaagtggaggacggtggcagtccgcagaaatccagcactgccattctccaggttact
gtaacagacgtcaatgataacaaaccagtgtttaaagagagtcagatagaagtgcacata
ccggagaattcccctattggcacgtctgttgtgcagctccaggccacagacgcagacata
ggggccaacgcagagatacattatgtatttgggactcaggtgcctcctgctacaaaaagg
ctgtttgcattaaatacaacatctggcctaattactgtgcagagacctctggaccgggag
gagactgccattcataagctctctgttttagccagtgatggcagctcgagttcagccaga
gctactgttaccataaatgtgactgatgttaatgacaatccacctaatatagacctgaga
tacataatcagccccattaatgggactgttttcctctcagagaaggatcccatcaatacc
aagatagctctcatcacggtgtcagacaaagacactgacatcaatggcaaggtcatttgt
ttcatagagaaggatgtgcccttccatctcaaagccgtgtacgacaaccagtatctgcta
gagacatctgccctgcttgactacgaggggacaaaggagtacaactttaagattgtcgct
tctgactctggaaagccgagcttgaatcagaccgccttggtacgagtgaggctggaggac
gaaaacgacaaccctcctatttttacacagccggtcattgagctggctgttatggagaac
aacaaacgcgacctgttcctcactactctcagcgccacagacgaggacagcgggaaaaat
gcggagatagtgtatcagctgggacctaatgcatcctttttcgatctggaccgcaaaacg
ggggtcctgactgcatccagggtgtttgaccgggaggatcaagacagattcctgttcacg
gtaacggcgagagataacggcacgcctcctctgcaaacacaggcagccgttattgtaacg
gtgctggacgaaaatgacaacaaccccaagttcacacataatcacttccagttctttgtg
tctgagaatcttcctaaatacagcaccgtgggagtgataactgtgacagattctgatgct
ggagagaatgccgctgtttctctttctatactgaatgacaatgagaactttatactggat
ccttactccggtgtgatcaaatctaacgtgtcattcgacagggagcagcagagctcctac
acgtttgacgttagggctgtggacagcggcaggcctccgtgctcctcagccgccaaggtg
accatcaatgtcatcgacgtgaacgacaacacccccatcgtcatctaccccccctccaac
acgtccttcaagctcgtccccctctcctccatcccaggatctgtggtggcagaagtgttc
gctgttgatggggatacggggatgaatgcagaactcaaatacaccatagtgagtgggaac
aacaagggtctgttcaggattgatcccgtcacggggaatattaccctggaggaaaagcct
gtagtgactgacataggcttacatagattagtggtcaatatcagtgatctgggctatccc
aaatctctccatactctggtgctggtattcctttacgtcaatgacaccgtggggaactcg
acgctcatctatgatctcatccgacgcaccatggagaccccaattgaccgaaacattggt
gaaagcagcgaaacttatcagagtggggactatttaaccataatgatagccttcgtcact
ggcgccttagtggtgattattgtcatctttgtcactgtgctgctgcgctgccgccatgca
tccaggttcaaggcggcacagaggaaaaaacagggggccgagtggatgtcgcccaacacg
gaaaacaagcagaacaagaagaaaaagcgcaagaaaaggaagtcccccaaaagctccttg
ctcaactttgtcaccatcgaggggaacaaatctgacgaccctgcccacgagccaatcaac
ggaaccatcagtctgcccaccgagctggacgagcaagggattggacgctttgattggaat
gccacacctaccacaaccttcaaaccgagcagcccagacctggcccggcactacaagtcc
gcctcgccgcagtcagccttccacctcaaggccgacacgccggtctcggtgaagaagcat
cacgtgattcaggagctccctttggataacacatttgttgggggctgtgacaccctttcc
aagagatcctcaacgagctctgaccacttcagtgcctcagagtgcagctcccaaggaggg
ttcaagacgaaggggcccatgcacaccagacagcagggaacattaactcgtgcccgaact
gaactgaaccctgaatatctggaccttcgtccgcgagccgagctgaaccctgaatattgg
accccttgcacccctttatcacagcggcgcgtcacgtttcacctgccggatggctctcag
gagagctgcagtgacagcggtctgggggaccatgagcctgtaggcagtggctccctcctc
acacaacctcttcctctggtgcaggcgcaggacgacttctacgagcaggcttcccccgat
aagaggactgaagctgatggcaactccgatcccaactctgacggtcctctgggaccacgt
ggcctagtagaagctacagagatgtgcacacaagagtgccttgtcttgggacattcagac
aactgttggatgcccccaacgttgggaacgtaccagcagcccaagtcacccgtgtccagc
tttgggtctcagagggagtggggtcccaaggaaaaactcctcaatggacatactctgacg
agaacctggaaaaatgagagtgggcggtcagagcattttggtgacaggaagcagtttggg
agcggagagggacacttcaccagcagtggaatggctgatattccactggtgagtttgaag
tcctgccagcctgcctcctgtccagacagcccaaaggaccagcagctataa
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