Mugil cephalus (flathead mullet): 125005146
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Entry
125005146 CDS
T08342
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125005146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125005146
03036 Chromosome and associated proteins [BR:
mcep03036
]
125005146
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125005146
Coactivators
SAGA/TFTC/STAGA complex
125005146
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125005146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
125005146
NCBI-ProteinID:
XP_047436150
LinkDB
All DBs
Position
3:16226128..16313699
Genome browser
AA seq
1083 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPVGKTDENGGAGSVAPANHHLGK
TLPAPVSTTTLEQQQQGRRNKPEMRQEINSKDVSPDKTVTSPSLGCAPAFGEPSTTSAAS
VNATSSGSQSHGASITTLTASGVSTLASPPASISTTTCSRGSKVTPGTGETSTEANTPRK
RVATPRRSASARIKSLNGAAITTRRNSNTAVADNVSSVETSATPPNSTRPVTSSINTSTF
TVSNANLPLGQSAIALDRGTPTIALHRLPSHIVASIAQNGSGTSVTALVRQGAPIGPVTP
PPPQGNHGKTVTDTGASKTDDCQSKAVMSTQPSSVSSVINTVSSSSSSSSSSPLVTPTTT
TAAATTTTTISHPLSSATTTAGATGMSTSSVCGTTQTTSVTTTVSMLRPTAPSPTPAVAT
PVQTQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPAGMVLVRTELGQLVMVPQQ
ALAQAQAQAQAQAQNNISPRPATPTTGASFRVTTPQQSPVTSQTTRQCPLTPAKMAPTPS
PTPSSPALQTSSSSSSSSSSSSCPALRPKAPVAPAVAVTAPQQTPVVMAPQAPAQPPSQP
VQPQQTGIATAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLL
DAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQQGVKPVPG
GTPPAVVTGPAVRIRHPNSVSTTTGASALPAGTLGHAAAMGVKAGGAVGAQVRMPMVITQ
SIRAQGTMGKGAIIQAGKSPMGLPVQISGNQKNKLNDPGGGSFRDDDDINDVASMAGVNL
NEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHA
TQSRLRTVVEKVSTIAQHRLDSCKDEECYEQSADVRSQLRFFEQLERIEKQRKDEQEREI
LLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGA
TPSGTEVSSGAAGSPASSSAPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRA
LLK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtctcagcttgcagggcaaagcaacccagtggga
aaaacagacgaaaacggaggcgctggctccgtggcccccgctaaccatcacttaggaaaa
acgctaccagctccagtgagcaccacaacactagaacaacaacaacaaggacggcgtaat
aaacctgagatgcgccaggagatcaactctaaagacgtgagcccggataaaactgtcaca
tctccttcactgggctgcgctcctgcttttggcgagccctccaccacttcggctgcctct
gtgaacgccactagcagcggctcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcgtctccgccggccagcatcagcaccacgacctgcagccgg
ggctctaaggttaccccgggcacgggcgagacgtcgaccgaggcgaacacgccgaggaag
cgcgtagcgacgcctcggaggagcgcctcggctcggataaagagtttgaacggcgcagct
ataacgacgaggaggaacagcaacacggcggtggcggacaacgttagctctgtggaaacc
agtgcaactccaccaaactccacccgaccggtcacatcctctatcaacacctcgactttc
accgtatccaacgctaatctgcctctaggtcagtcggctatcgctctcgaccgggggact
cctaccattgctttgcacagactaccgagtcacatcgtagccagtatagcccagaacggc
agcgggaccagtgttacggccttggtccggcagggcgcacctataggacccgtgaccccg
ccaccccctcaggggaaccacggcaaaacagtcacggacaccggggcttccaaaacagac
gactgtcagtccaaagctgtaatgtcaacccagcctagtagtgtcagttctgtgataaac
actgtttcctcttcttcttcttcttcttcttcttctccccttgtcacaccgactacaact
acagctgcagctacaacaaccacaacaataagccaccctctgagctctgccacaacaact
gcgggtgccacagggatgtcaaccagctctgtatgtggtactactcagaccacatcggtg
acaaccactgtcagtatgttaaggcccacagctccctctcccacgccagctgtggccacc
cccgtgcagactcagccccgtcctggactcactgcacctcagaggatcgtagccccccag
ctgattgtcagaccgcctcagcagcagacgaccattcagctgcccccggggtttaccatc
ccagcggggatggtgttggtacgtacagagctaggccagctggtgatggttcctcagcag
gctttggctcaagctcaagctcaagctcaggcccaagcccagaacaacatctctccacga
ccagctacccccaccactggggcatccttcagagttacaacgccacagcagtctcctgtg
acctctcaaacaaccaggcagtgccctttgaccccggccaagatggcaccgactccctct
cccactccttccagccctgccctccagacctcttcttcctcctcctcctcctcttcctcc
tcctcttgtcctgcacttcgcccaaaggcccccgtggcaccggccgtggctgtgacggct
ccgcagcagacccccgtggttatggccccgcaggccccggcccagcctccctcccagcca
gtgcagccacagcagacgggcatcgccacggcccccggagctcctgtcgtgtctcaggaa
atgcaagagaatgtgaaaaagtgtaagaatttcctggcaacacttatcaagctggcatct
cacaactctccgtcccccgagacttccaagaacgttaaggctctggttcaagacctgctg
gatgccaagattgaaccagaggagttcaccagccggctgcagactgagctcaagtcgtct
cctcaaccttacctggtgccctttctcaagaagagcctcccggccctgaggctgtctctg
ctgaacagtcagcagtccctgacacagcccccgcagcagggagtcaaaccagtgcccggc
ggcacccctcctgccgtcgtgactgggccagctgtccgcatacgccaccccaacagcgtc
agcaccaccacgggtgccagcgcgctgcccgccgggacgctcggacatgcagctgccatg
ggtgtcaaggccggaggcgcggttggtgcccaggtccgaatgcccatggtgatcacgcag
tccatcagggcgcaaggcactatgggaaagggagccatcatccaagcaggcaaaagtccg
atgggcctgcctgttcagatatctggaaatcagaaaaacaagctcaacgaccccggagga
ggctctttcagggacgatgatgacatcaatgacgtggcctcgatggccggcgtgaacctg
aacgaggagagcgcgagaatactcgccaccaactccgagctagtgggaacgcagatccgc
tcttgtaaagacgaagcatttctccatccggggctgctacaccgacgaattctggaaaca
gctaagaagtttggcgttacggaggtccccatggaggcagtgacattcatctcacacgcc
acgcagtcacgactacgaacggtggtagaaaaggtttctactattgcacagcaccgactg
gattcatgtaaggacgaggagtgctacgagcagtctgcagacgtccgctctcagcttcgc
ttcttcgagcagctggagagaatcgagaagcagaggaaggacgagcaggagagagagata
cttctgaaagccgccaagagtcgctcccggcaagaggacccagagcaagctcgactgaaa
cagaaagctaaggagatgcaacaacaggagctggcccagatgaggcagcgagatgccaat
ctaacagcactagccgcaattggaccccggaaaaaacgcaaagtggattcaccaggggcc
actccatcagggaccgaggtttccagcggcgcggcgggctccccggccagctcctctgcc
ccgtccacctcatcacgccagtacacacggcagcgcatcactcgcgtcaacctcagggac
ttaatcttctacatggagcaggagagagagaccgcccactcgctcctcctttaccgtgcc
ctgctcaagtag
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integrated database retrieval system
