Mugil cephalus (flathead mullet): 125005161
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Entry
125005161 CDS
T08342
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125005161 (tent4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125005161 (tent4b)
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125005161 (tent4b)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125005161 (tent4b)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125005161 (tent4b)
Transfer RNA biogenesis [BR:
mcep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125005161 (tent4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
125005161
NCBI-ProteinID:
XP_047436180
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All DBs
Position
3:complement(16094694..16114321)
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AA seq
688 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMQIWETTQGLVYLQVNSSSSHAAGSQSLNATVNGASGAVL
ASRNGTGDSNTGSGEAKTQGMSASVGDGELAQQRDFIPLETNSNHNHRAAGRDVVGGGGQ
QQQQEGSGVAVVWRGVTDGHPNKRKRDNKASTFGFNSSLLNSGSGFNTGGYDGYTGTPWK
DRNYSEGIVGLHEEISDFYEYISPRPEEEKMRLEVVDRIKGVIHDLWPSAEVQVFGSFST
GLYLPTSDIDLVVFGKWETLPLWTLEEALRKRNVADENSIKVLDKATVPIIKLTDSFTEV
KVDISFNVKSGVKAARLIKEFKEKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLM
AVSFLQLHYREDVCSPNINIGVLLIEFFELYGRHFNYLKTGIRIKDGGCYVAKDEVQKNM
MDGYRPSMLYIEDPLQPDNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETES
ILGRIIRVTQEVDEYREWIRKNWGSPSQNDLSLNRNDVALFESQQLDECNNNVPEDDDDD
DVVVLPSAPHSKTSSNSSSPSPSLRSSPSSSPLSPSSTSSPSTSSDGDSDGTPCKTAKQQ
SGRGSSTHREKSAVVSNHRTQSHTTSTPSGSNKGGKARMARSHHKSGHQGQQNSSSSTKS
HQSNKPHHQGNSKKRKNVRDTTQEDLCR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagaatcgcctggtttcaaccagaacaacgcggacccgctaacaacctgtgg
atgcagatctgggagacgacgcagggtctggtgtatttgcaagtcaacagcagcagcagc
cacgccgcgggatctcagagcctgaacgcgaccgtgaacggggcgtcgggagccgtcctc
gccagcagaaacgggacaggcgactcgaacaccggtagcggagaagccaagactcagggg
atgtcggcctcagttggggacggggaattagcccaacaacgggactttataccactggaa
accaatagcaaccacaaccaccgagcagctggcagggatgttgtcggtggaggggggcag
cagcagcagcaggagggcagcggggtcgctgtggtgtggaggggagtgacggacggacac
cccaacaaaagaaaaagagacaacaaagctagcactttcggattcaattccagcctcctg
aacagtggcagtggcttcaacacggggggatatgacggctacactggcacgccgtggaaa
gacaggaactactcagagggaattgttgggttgcacgaggaaatcagtgacttctatgag
tacatttccccacggccggaggaggaaaagatgaggctggaggtggtggacagaatcaag
ggagtcatccacgacctgtggcccagtgctgaggttcaagtgtttgggagtttcagcact
ggtctttatctgccaacaagtgacattgacctggtcgtatttgggaagtgggagacgctc
ccgctttggacgttggaagaggctctacggaagagaaacgttgcagatgagaattccatc
aaagtcctggacaaagctacggttcccatcatcaaactgactgactcctttactgaggtc
aaagttgacatcagcttcaacgtgaagagtggcgttaaagctgctcgcctcatcaaggaa
ttcaaagagaaataccctgtgctgccttacctggtcctggtcctgaagcagttcctcctg
cagagggatcttaatgaagtttttactggtggaatcggctcctacagtctctttctcatg
gctgtcagcttcctgcagcttcactacagggaggatgtgtgcagtcccaacatcaacatc
ggtgttctgctcattgagttcttcgagctctacggtcgccacttcaactacctgaaaaca
ggcatcaggataaaagacggaggttgctatgttgccaaagatgaggttcagaagaacatg
atggatggctacaggccctccatgctctacatcgaggacccgctgcagccagacaacgac
gtcggccggagttcatacggtgccatgcaggtgaaacaggcatttgactacgcctatgtg
gtgctcagccacgccgtgtcacccatcgctaagtattaccccaacaatgagactgagagt
atacttggccgaataattcgagtaactcaagaagtggacgaatacagggaatggattcga
aagaactgggggagcccatctcagaatgacctgtcactcaacagaaatgatgtcgcgttg
tttgagtcccagcaactcgacgaatgcaacaacaacgttcctgaagacgatgacgacgat
gacgttgtggtcctgccatcggctccccacagcaaaacctcctccaactcctcctctcct
tccccttcgctgcgctcctctccctcctcctctccactctcaccgtcttccacgtcctct
ccttccacctccagcgatggggactctgatggcacaccgtgtaagacagccaagcagcag
tctggccgaggatctagtacccacagagaaaaatctgctgtggtcagtaatcaccgaaca
cagagccacactaccagcactccatctggaagcaacaaagggggaaaggccaggatggct
cgatcccaccataagagtggccaccaggggcaacagaactcctcctctagcaccaaaagt
catcagagcaacaagccacaccaccaaggcaacagcaagaagaggaaaaatgtgcgagac
actacacaagaggacctctgcagatag
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