Mugil cephalus (flathead mullet): 125005200
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Entry
125005200 CDS
T08342
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125005200 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125005200 (vps35)
Membrane trafficking [BR:
mcep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125005200 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
125005200
NCBI-ProteinID:
XP_047436275
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Position
3:3320116..3337666
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AA seq
789 aa
AA seq
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MWYSLKCVGVRGLLLCIYSVFYGLQDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMA
ISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDI
LKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGTEEMTGDINDSIDFVLLNF
AEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYKQIVLPGVL
EQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNIIIALIDRLA
LFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVD
YVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILMVLQLKHFPPLFEY
FDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILNLVSTLIQDQPDQPSDDPDPEDFAEE
QSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLAFRYKENS
STDEKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFM
SQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKLLKKPDQC
RAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRY
VCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESE
GPAYEGLVL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtggtattccttgaaatgtgttggtgtccgaggtctactactgtgtatttatagtgtg
ttttatggtctgcaggacaagaacaaactgatggatgctttaaagcatgcttccaacatg
ctgggtgagctgaggacctccatgctttctccaaagagctactacgagctctatatggct
atctctgatgaactccactacctagaggtttatctgactgatgaatttgccaagggacgc
aaagtggcagacctctatgagctggtccaatatgccggcaacatcatccctagactctat
ctgctgatcacagtgggtgtggtgtacgttcgctccttcccccagtctcgtaaggacatc
ctgaaggatctggttgagatgtgtcgtggtgtccagcacccgctcagaggcctcttcctc
agaaattacctgttgcagtgtacacgcaacatactcccagatgatggagagcagtcagag
ggaacagaggagatgaccggtgacatcaacgactccatcgactttgtcctcctaaacttt
gcggaaatgaacaagttgtgggttcgaatgcagcatcagggtcacagccgagaccgagag
aagagagagaaggaacggcaagagctaagaattctggtgggcaccaatctagttcgcctc
agccaactggagggtgtcaacgtggacaagtacaaacagattgttcttcctggtgttctg
gaacaagttgtgaactgtagagactcgttggctcaggaatatctaatggagtgcatcatc
caggtttttcccgatgaattccaccttcaaaccctgaaccctttcctgcggtcttgtgcc
gagctccatcaacatgtcaatgtcaagaacatcattattgccctcattgacagacttgct
ctgtttgctcatcgagaagatggcccaggcattccagctgagatcaaactgtttgacatc
ttctctcagcaagtggccactgtcattcagtctcgccaggacatgccatcagaagacgtg
gtctctcttcaggtgtctctcatcaatttggccatgaaatgctaccctgaccgtgttgac
tacgtagacaaagtcctggagagcactgtggagatattcaacaagctcaacttagaacac
atagcgaccagcagcgcagtgtcaaaggaactcacccggctgctgaagattccagtggat
acctacaataacatcttgatggttctgcagctcaagcacttcccaccactctttgaatac
ttcgactatgagtcacgcaagagcatgagttgctatgtgctgagcaacacgctggactac
aacaccaccatcgtggctcaggaacaggtggacgccatcttgaacttggtatccacgctg
atacaagaccagccagaccagccctctgacgatcctgacccagaggactttgctgaggag
cagagccttgtgggtcgtttcatccatctgctccactccgaagatcctgatcagcagtat
cttattcttaacacagctcggaaacactttggtgctggtggaaaccaacggattcgctac
acgctgcctcctctggtgttcgctgcctaccagctagcctttagatacaaggaaaactcc
tcaacggatgaaaagtgggagaagaagtgccaaaagatcttttccttcgcccaccagacc
atcagtgctcttatcaaggctgagctggctgagctgcctcttcgactgttcctgcagggg
gcgctggcggcaggcgagattggctttgagaaccatgagactgtagcctatgagttcatg
tcacaggccttctcactgtatgaggatgagatcagcgactccaaagcccagttggcggct
atcacactgatcatcggtaccttcgagcgaatgcgatgtttcagcgaggaaaaccacgag
cctctgaggactcagtgtgcgctggctgcgtccaagctgctgaagaagcctgaccagtgc
agagctgtcagcatctgcgcccatctgttttggtcaggtcgcagcactgacaaaaatggt
gaagagatccgtgatggtaagcgggtgatggagtgtctgaagaaagccctaaagattgcc
aaccagtgcatggacccatccctgcaagtccagcttttcattgaaatccttaacagatac
gtctgcttctatgagagggaaaatgatgcggtgacagtccaggtattaaatcagctgatc
caaaagatcagggaagatcttcccaacctggaagcaagtgaagagacggagcagatcaac
aaacatttccataacacactggagcatctccgtctgcagagagaatcccctgagtctgag
ggccctgcctatgagggcctggtcctttaa
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