Mugil cephalus (flathead mullet): 125005559
Help
Entry
125005559 CDS
T08342
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcep04812
]
125005559 (katnb1)
Cytoskeleton proteins [BR:
mcep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125005559 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_LRRK2
PROPPIN
Beta-prop_IFT140_2nd
RMC1_N
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WDR54
VPS8_N
Ge1_WD40
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
125005559
NCBI-ProteinID:
XP_047436955
LinkDB
All DBs
Position
3:31594781..31609124
Genome browser
AA seq
682 aa
AA seq
DB search
MASSSSTKISWRLQEFEAHASSVSCSSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKNPVECVQFNVSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKASVTSLGFHPFGDFL
ASSSTDTNIKLWDVRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTVKLWDLTQGK
TITEFKSHTAAVNIVQFHPNEYLLASGSSDRSIKLWDLEKFTMIGSLEGDTTPVRCVLFS
PDGSCLFSGASDSLRVFGWEPDRCFDLVPVGWGKVSDLAICSQQLIGVSHQLSSVSSFVV
DLKRVKKSGGSVIQGIIQDNQPLPEPKDPKAAALRRNYEKRPTTTSQRVKQRPDAERRSP
DGERRSPSEDEADEKLSSAEIHNAEDYKEIFQPKNAISRTPPKISEPFPAPPEDETILAI
GRQLKDLTSPFPDKQQAPPLASSTPVQRVEPTVVQRPEPPPSSQPPPSTAKPRAQPKLIP
STRNEPIGLNVADFLPPAANHRPGALGDEDALSQIKKGHDTMSVMLSSRHKNLETVRAVW
AREDIKSALDAAVSMSDLSIVVDVLNIINLHPTLWKLDLCTSVLPQIDKLLQSKYESYVQ
TGCLSLKLIMKHFWILISDTLKATPSVGVDITREERLQRCRSCFQMLKNLSNVVKNKSSQ
VGRHGSAFKELQLLMAPLHDAL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccagctccaccaagatctcctggcgactgcaggagttcgaggctcacgcc
agcagcgtgtcctgctcgtctctggggaaaagctccgggcggctactggccacgggagga
gaggactgcagggtcaacatctgggccgtgagcaaggccaactgcatcatgagtttgacc
ggtcacaagaacccggtggagtgtgtccagttcaacgtgtcggaggagcaggtcgtggcc
gggtctcagtctggatccatccgggtctgggacctggaggccgctaagattttaaggact
ctgatgggacataaagccagcgtcaccagtctgggcttccacccgttcggagacttcctg
gcctccagctccacggacaccaacatcaagctgtgggacgtgaggaggaagggctacgtg
ttcaggtacaagggtcacactcaggccgtcaggagtttggccttcagccctgacgggaag
tggttggcgtcggcgagtgacgactgcactgtcaaactctgggacctgactcaggggaaa
accatcactgagttcaaatctcacactgcagccgtcaacatcgtccagttccaccccaac
gaatacctgctggcatccgggagctccgacaggtcaatcaaactgtgggacctggagaag
tttacgatgattggttcattggagggcgacactactccagtcaggtgcgtcttgttcagt
ccagatggctcctgcctgttcagtggagcctctgactctctgagggtttttggctgggag
cccgaccgctgctttgacctggttccagtcggatggggaaaagtatcggacctggccatc
tgcagccagcagctgatcggcgtgtctcaccagctgtccagtgtgtcgtccttcgtggtc
gatctgaagagggtgaagaagagcggaggctctgtgatccaaggaattatccaggacaac
cagccgctcccagagcccaaggatccgaaagcagcagccctacgccgcaactacgagaag
agacccacaaccacctctcagagagtgaagcagcgtccagatgctgagaggcggagccct
gatggcgagaggcggagccccagtgaggacgaggcagacgagaagctgtcgtcagctgag
atccacaacgccgaggactataaggagatcttccagcccaagaacgccatctctcgaact
cctcccaagatctcagagcctttccctgctcctccagaggacgagaccatcctggccatc
ggccgccagctgaaggacttgacttctccttttcctgacaagcagcaggctcctccactg
gcctcctccacccccgtccagagggtggagcccacagtggtccagcgtccagagcccccc
ccctccagccagcctcccccctccacagccaaacccagagctcagcccaaactcatcccc
agcaccaggaacgagcccattggtctgaacgtggccgacttcctgcctcctgcagccaat
cacaggcctggagctctgggggacgaggacgctttgtcccagatcaagaagggacacgac
accatgagtgtgatgctgagcagccgacacaagaacctggagacggtccgggccgtgtgg
gccagagaggacatcaagagcgctctggacgctgccgtctccatgagtgacctgtccata
gtggtggacgtcctcaacatcatcaacctccacccgactctgtggaagttggacctgtgc
accagtgtcctccctcagatcgacaaactgctgcagagtaaatatgagagctatgtccaa
accggatgtttgtctctgaaactcatcatgaaacatttctggatcctcatctctgacaca
ctcaaggccacgccctctgtgggagtggacatcacccgagaggagagactccagaggtgc
aggtcgtgcttccagatgttgaagaatctcagtaacgtggtgaagaacaagtcgtctcag
gtcggtcgtcatggcagcgccttcaaagagctgcagctgctcatggcgccgctccacgat
gcactctga
DBGET
integrated database retrieval system
