Mugil cephalus (flathead mullet): 125005840
Help
Entry
125005840 CDS
T08342
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125005840 (ddx21)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125005840 (ddx21)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125005840 (ddx21)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
Pre-60S particles
Helicases
125005840 (ddx21)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125005840 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125005840
NCBI-ProteinID:
XP_047437428
LinkDB
All DBs
Position
3:complement(10442593..10451542)
Genome browser
AA seq
792 aa
AA seq
DB search
MVQICVWFVNTLPDAALRVPFHPRARSLASVSALRDSTREEMPSKIIVETEEQEMETEVD
TIAEAKILKKKNKEGKKLKKKQQELEVQEEPDCDPPAPKKKKKKDKLAADQENGHMDEAT
DMNGNSDQAETPKQKTKKTTEGDTEKKKKKQKKPIAEEATNGHSTPNTPVQTPIQTPSQS
SEDSASDSEKETEETQEQKEGAFSNFRISKVTIDKLKARGVSYLFDIQVKTFNPIYDGED
VIAQARTGTGKTFSFAIPLVEKLQNDAVEPTRGRPPKVLVLTPTRELAIQVAKDFKDITK
KLSITCFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHLQNNKLNLSKLKHVILDEVDQML
DMGFAEQVEEILGSSYKKDDDANPQTLLFSATCPPWVYDVAKKYMRPGCKHVDLIGKKTQ
KAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELSMNTSIKQSTQ
SLHGDIPQKQREMTLKGFRNGVFEVLVATNVAARGLDIPEVDLVVQCSPPKDVESYIHRS
GRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPTANEIIKSSSKDAVRFLDS
VPVTAVGYFRASAEKLIEERGAVEALAAALAHISGATALEQRSLLNSDAGYTTMQLVCSQ
EMHNLGYAWRTIKEQLGEEFETHVHRMIFLKGRTGVCFDVPVDKVKQMQDNWTDGRRWQL
TVATELPELEEKPHSNRGDRGSGYRGDRGGFRGGRGRNFGGNGGRSNGFRGNGGGGNNRG
GHKRSFSQAFDY
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatctgtgtctggtttgtgaacacgcttcctgacgccgccttgcgcgttcct
ttccatccgcgtgcccgtagcctcgctagtgtgtctgcgttgagggactccaccagggaa
gaaatgccgtcaaaaatcatcgttgaaaccgaggaacaagaaatggaaaccgaagtggac
actattgcggaggccaagatcctaaagaaaaagaacaaggagggcaagaagctgaagaag
aagcagcaggagttggaggtgcaggaggaaccagactgcgatcccccagcacctaagaag
aaaaagaaaaaagacaagctggcagcggaccaagagaacggccacatggacgaggccaca
gacatgaatggcaacagtgaccaggctgaaacaccaaagcagaagactaagaaaaccaca
gagggagacacagagaaaaagaagaagaagcaaaagaaaccaattgcagaggaagcaacc
aatggacattccaccccaaacacccctgttcagactcccatccagacaccgtcccagtca
agtgaagactcagctagtgacagcgaaaaggaaacggaggagacacaggagcagaaagaa
ggggcattctccaacttcagaatctccaaggtcactattgataagcttaaagctcgggga
gtctcttacctctttgacattcaggttaagacatttaatcccatctatgatggtgaagac
gtaatcgcccaagcccgtacaggaacaggaaagacgttctcctttgctattcctctggtg
gagaagctccagaacgatgcagtcgagccaaccagaggacgacctcccaaggttctggtg
ttgactccaaccagagagttggccatccaggttgctaaggacttcaaagacatcaccaag
aaactgtcaatcacctgtttctatgggggcagctcttacaatccacagattgatgcgatc
cgtaacggcattgacatcttggttggaacccctggtcgcatcaaggaccatcttcagaac
aataaactcaacctgtccaaactgaaacacgtgatcctggacgaggtagaccagatgttg
gacatgggctttgccgagcaggtggaggagattttggggtcgtcatataagaaagatgac
gacgccaacccacagactctcctcttttctgccacttgtcccccttgggtgtacgatgtg
gcaaagaaatacatgagaccagggtgcaaacacgttgacctgattggcaagaaaacacag
aaagctgcaacaactgtggagcatttggccatcgcgtgtcactggtcacagcgcgctgct
gtgataggagacgtgattcaggtgtacagtggcagccatggcagaaccatcgtcttctgt
gagacaaagaaagaggccaatgaactttcaatgaatacatccatcaagcagagtacccag
tccctccatggtgatattccacagaagcagagggagatgacactgaagggcttcaggaat
ggagtctttgaggttctggttgccaccaatgttgctgctcgtggattagacattcctgaa
gttgacctggtggttcagtgttctccacccaaggatgtggagtcgtacattcatcgttcg
ggacgtacgggccgagcaggcaggactggagtctgcatctgcttctaccagagaaaagaa
gaggaccagctgcgctatgtagaaaacaaagctggtatcacattcaggcgagttggcgtt
cccactgcaaacgaaatcatcaagtcatcaagcaaagacgctgtcagatttctggactct
gttccagtgacagcagtcggatactttagagcatcagcagagaagttgatagaggagaga
ggagctgtggaggcactagctgctgcactggcccacatttctggagccacagctttagag
cagaggtcgctgctcaactctgatgctggttacaccactatgcagttggtgtgttcccag
gagatgcacaacctgggttacgcctggagaaccatcaaagaacagctcggggaagagttt
gagacacacgttcacagaatgatcttcctcaaaggcagaacaggcgtttgttttgatgtc
ccagttgataaagtcaagcagatgcaggataactggaccgatggccgccgttggcaactg
actgtagccacagagctcccagagctggaggagaagccacacagtaaccgcggcgacaga
ggcagcggttaccgtggtgacagaggagggttcaggggcggcagaggacggaactttggg
ggaaacggtggccgtagcaacgggttccggggcaatggtggcggtggaaacaacagaggg
ggacacaaacgcagcttcagtcaagcttttgattactga
DBGET
integrated database retrieval system
