Mugil cephalus (flathead mullet): 125006343
Help
Entry
125006343 CDS
T08342
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125006343 (chd5)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125006343 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
125006343
NCBI-ProteinID:
XP_047438247
LinkDB
All DBs
Position
4:complement(13984194..14024227)
Genome browser
AA seq
2058 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNAVPLTPLDSFFSDDDSLKQQKKKKPKKMK
EGKMPKVKKRKKEGGLQARVDSDLEETSEVEEERERPAIGSESESSTYGPTKKKKKKPKE
KKEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMHEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPTSVSSGQLSSQLGPIKKAKTKEGKGPGVRKRSKSVKEVKKKPKPKKTKSKSGQSGKKK
KASSSEEDLLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEDEEE
PVGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILHWMWGDPPLPAELPPGPDGKPSDPLTKPPLKGHPEREFFVKWAALSYWHCSWV
SELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYG
IKPEWMVIHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYDSHKASYWDHRE
QILGEDQRPLVVRKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARTMGTSMHRDNKDGEEGNVIHYDDDAISKLLDRSQDAT
EDTEIQNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQ
SRRQLKSEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRD
LRGKSEREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQ
EFEHVNGKLSSPDLIPIGMELKKLTESVSSDPNTPVPASPVATQPGTPVSLEKTESFLGA
AEDKETTEQDGKKLSEQEASSAEPASAPEKTADSEESKASSEEKTEDERSRTESPFTKAE
PSANSKESAFKQAELPSPKTDSCKDTEKASEKGDSDSPQSKVEDKDVKSDDLKSEDILEG
RLNGDKDTLDEMDESRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIW
HRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLL
EQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAV
LHKALRSLSDTGAASTAHSFAHSAILAEDPPLSLLSQSRGPILHTDSVKFPAIGRDPFQS
PVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFSQ
GGFGCSQMYGSSFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGPPTSHLDKKSLDSLRDV
ATPDLKSGKPSDVICIED
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggacgatgaaggcgagcgcaacgccgttcccctcacccccctcgacagc
tttttctccgacgacgactccctcaaacaacaaaagaagaagaagcccaaaaagatgaaa
gaggggaaaatgcccaaagttaagaagaggaaaaaagagggaggactacaggctcgagtc
gacagcgacctggaggagacctcggaggtggaggaggaacgggaacgtccggccatcggc
tcagagagcgagagcagcacgtacggtcccaccaagaagaagaagaagaaacccaaggag
aagaaagagaaaaagcccaggaagaagaagagagacgaggaggatgatgacgacgacgac
gatgatggcaacatgaaggaacccaaatcatccagccagctgatgcatgaatggggcctc
gaagacgttcagtacggcttcacagaggacgactacaaaaccatcaccaactacaaagct
ttcagccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaag
atgatgacagtgttaggggccaagtggcgggagttcagtgccaacaacccgttcaaaggc
gcatctgccaccgccgtggccgccgctgtggctgccgccgtggaaaccgtaaccgtggca
cagccaacgtctgtcagcagcggccagctgagctctcagctggggccaatcaaaaaagcc
aaaaccaaagagggaaaggggccaggagttagaaagaggagcaagtctgtgaaagaagtg
aagaagaaacccaagccgaagaagaccaaatcaaagtctggccaaagtgggaagaagaag
aaagcatcctcgagcgaggaggacttactggaggagtcagactttgatgacatcagcatc
cacagtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgt
gggcggaaaaaaaggaaaaaggaggacggtgacggctatgagacagaccaccaggactac
tgtgaggtctgccagcagggcggagagatcatcctgtgtgacacctgtcccagggcctac
cacctggtctgtctggaccccgagctggagaaggcccccgagggaaagtggagctgtccg
cactgtgagaaggaggggatccagtgggaggccaaagatgaggaggaggatgaggaggag
cccgtgggcgaggaagaggatgaccacatggagttttgcagagtgtgtaaagacggagga
gagctcctgtgttgcgacacctgcccgtcgtcgtaccacatccactgcctcaacccgcct
cttcccgagataccaaacggggagtggttgtgtccccgctgcatgtgccctccacttaaa
ggtaaagtacaaaagattctgcactggatgtggggagatcccccgctgccggctgaactg
cctccaggccccgacggcaagccaagtgatcctctgaccaagcctccactcaagggccac
ccggagagggagttcttcgtgaagtgggccgccctttcgtactggcactgctcctgggtc
agcgaactgcagctggagctttaccacacggtcatgtaccggaactaccagcgcaagaac
gacatggacgagcctccgccctacgactacggctccggggaggaggagctcaacagcgag
aagaggaagagcaaagaccctcagtatgctgtgatggaggagcgcttctaccgctacggc
atcaaacccgagtggatggtcatccaccggatagtcaaccacagtttcgataaggatggc
gacgtgcactacctgatcaagtggcgagacctaccctacgaccagtgcacctgggaggtg
gacgattttgacgttccagagtacgacagccataaagcgagttactgggaccacagagag
cagattttaggggaggatcaacgcccccttgtggtgaggaaaggaaagaaactcaaagac
gaccatccaaagagggaggtccctcctgatgctcccatcatagatcccaccatcaagttc
gagcaccagccgtggtacatcaatgccaccggaggaacgttgcacccgtaccagctggaa
ggcctgaactggttgaggttctcctgggctcagggcaccgacaccatcctggctgatgaa
atgggtctggggaagactgtgcagacaatagtgtttctctactcactatataaagagggc
cattctaaggggcctttcttggtgagcgcacccctctccacgatcatcaactgggagagg
gaattcgagatgtgggcgccagatttctacgtggtgacgtacacgggagacaaagacagc
agggcaatcatcagggagaacgagttcacctttgaagacagcgcggtgaaatcaggacgc
aaggtgttccgcatgaagaaagacactccaatcaaattccacgtgctgctgacgtcgtac
gagctgatcactatagatcaagccattctgggttccatcacctgggcctgtctggtagta
gacgaggcccacagactgaagaacaaccaatcaaagtttttcagaattctcaacgggtat
aagatctactacaagctgctgctgactgggactcctcttcagaacaacctggaggagctg
ttccacctgcttaacttcctcaccccggagcgcttcaacaacctggaaggcttcctggag
gagtttgccgacatctcgaaagaggaccagatcaagaaactccacgacctgctggggcct
cacatgctcaggaggctgaaagctgatgtcttcaagaacatgcccgccaagacagagctg
attgtcagggtggagctcagccctatgcagaagaaatattacaagtttatcttgacccgg
aatttcgaggctctgaactccaaaggtggggggaaccaagtgtccctgctcaacatcatg
atggacctgaagaagtgctgcaaccacccctacctgttccccgtggctgccgtggaggct
cctgttttacccaacggctcatacgatggcaacctactggtgaagtcctcaggaaaactg
acgctgcttcagaaaatgttgaagaaactcaaagatgaaggacacagagttctcattttc
tctcagatgacaaagatgctggacctgcttgaggattttcttgagtttgagggctataaa
tatgaacgtattgacggagggattactggaggcctaagacaggaggctattgaccgcttc
aatgcaccgggcgcacagcagttctgcttcttgctttcgacacgagccggaggtctcggc
atcaacctggccagcgcagacaccgtcatcatctacgactctgactggaatcctcacaat
gacatccaagcttttagcagagcccaccgtataggacaaaacaagaaggtgatgatctat
cgttttgtgactcggggctcggtggaggagcgaatcacccaagtggcaaagaggaaaatg
atgctgactcatctggtggtgcggcctggcctgggctcaaaaactggctccatgtccaag
caagagctggatgacatcctcaagtttggcaccgaggaacttttcaaagatgaaatggag
gcagcgcgtaccatgggtacctctatgcaccgtgacaacaaagacggcgaggagggcaac
gtcattcactatgacgacgatgccatctcgaagctgctggaccgcagccaggacgccacc
gaggacacagagattcagaacatgaacgagtacttgagctccttcaaggtggctcaatac
gtggtgaaagaggaagacggagaggaggaggtggagcgcgagatcatcaagcaggaggag
aacgtggacccggactactgggaaaaactcctccgccaccactacgagcagcagcaggag
gacctggcccggaacctgggcaaggggaagcgcattcggaagcaggtcaactacaacgac
acgacccaggaggaccaagagtggcaggatgatctttcagacaatcagtcggagtactcg
gtggggtccgaggacgaggacgaagattttgaggagaggcccgaaggtggacgcagacag
tctcgtcggcagctcaagagcgagaaggacaaacctctgccgcccctgctggcacgcgtt
gggggcagtattgaggtcctggggttcaacgctcgccagaggaaagccttccttaatgcc
atcatgcgctggggcatgcctcctcaggatgcgttcaactctcactggctggtcagggac
ctgagggggaagagtgagcgagagttcagggcctacgtgtctctgttcatgagacattta
tgcgagccgggggcagatggggcggagacctttgcagacggagtcccccgcgaggggctg
tcccgccagcacgttctcaccaggatcggagtcatgtccctcgtcaggaaaaaggtgcag
gagttcgagcacgtaaacgggaagctgagctctccagatctgatccccatcggaatggag
ctgaagaaactgaccgagagcgtgtcctctgatcccaacacccccgtgccggccagcccc
gtcgccacgcagcctggcacccccgtctcactagagaagacggagtctttcttgggtgcc
gccgaggacaaggagaccacagagcaagatggcaagaagctgtcagagcaggaagcttcc
agcgcggagccagcatccgcacctgagaagacagctgacagcgaggagagcaaggccagc
tcagaggagaaaacagaggatgagaggagccgaaccgagtcacccttcacaaaggccgag
ccgtcggcgaactcaaaagagtccgcgttcaaacaggcagagctgccatcgcctaagacg
gattcatgcaaagacacggagaaggcctcggaaaaaggtgattcagattctcctcagtcg
aaagtggaagacaaagatgttaaatcagacgacctgaagagtgaagatatattagagggt
cggttaaatggcgacaaagacactctggacgagatggacgagagcaggaaagaggacaaa
aacgggttcaaggccaagtttatgtttaatatcgctgacggaggttttacagagttgcac
accctctggcaaactgaggagcgagcggcgctgtcttcaggaaagatgcatgacatctgg
caccgtcgccatgactactggctgctggctggcatcgtaacacatggctacgctcgctgg
caggacattcagaacgacccgcgttacgcgattctgaacgagcccttcaaaaccgagatg
cataaaggcaactatttagagatgaagaacaagttcctggctcgccgctttaagttgtta
gagcaggctctggtgattgaggagcagctccggcgggcagcctacctgaacatgacccag
gaccccagtcacccggccatggctctcaacacacgcttcgccgaggtggaatgtctggca
gagtcccaccagcacctgtccaaagagtctctggccgggaacaagcctgccaatgccgtg
ctgcacaaagcacttcgctcactcagcgatacgggagctgcctcaacagcgcacagtttc
gcacacagcgccatactagctgaggacccgcccctatcgctgctgagccaatcacgaggc
cccatattacacactgactctgtcaagttcccggcaattggccgagatccttttcagtcc
ccagtgctgaaccagctggaggaacttctgagtgacatgaaagcagatgtgacgcgactg
cccaacatgttgtcgaggatcccgccggtgtcggcccgcctgcagatgtctgagaggagt
atcctgagccgcctcaccagccgaggcagcgagcctccaccgcagcagcctttcagccag
ggagggttcggctgctcccagatgtacggcagcagcttcggtgggggattcaggggaccg
ggcggacagcccatggtcaactacagtcagatgcctcttggaccttacgtcagcgtgtcc
tccaatggcccccctacaagccatctggacaagaagtcactggactccttgagagacgtg
gcgacgcctgacctcaagtcaggaaaacctagtgatgtcatctgtattgaggattag
DBGET
integrated database retrieval system
