Mugil cephalus (flathead mullet): 125006401
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Entry
125006401 CDS
T08342
Name
(RefSeq) twinfilin-2-like
KO
K14962
COMPASS component SWD2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125006401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125006401
03036 Chromosome and associated proteins [BR:
mcep03036
]
125006401
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125006401
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
125006401
COMPASS/SET1 complex (yeast)
125006401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cofilin_ADF
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD_LRWD1
MinC_C
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125006401
NCBI-ProteinID:
XP_047438323
LinkDB
All DBs
Position
4:complement(7208363..7219658)
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AA seq
622 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMLVLGAYREPKQSWDRDYDHFLLPLLDDQEPCYVLYRLDSQNAQGYEWIFISWSPDQ
SPVKQKMLYAATRATVKKEFGGGHVKYELFGTTEEDVCLMGYQRHVSSCSGPAPLTVAEQ
ELQRIKITEGRVKQVNTDVGVESKPQTLQGLAFPLQETARRALQQLAQKRINYIQLRLDV
NKETIELVHSNPTETRDLPRRVPQDTPRYHFFLYKHSHEGDYLESVVFIYSMPGYNCSIK
ERMLYSSCKSRLLEDVEKDYHLEVAKKLEIDNGEELTEDFLYDEVHPKQHAHKQAFAKPR
GPAGKRGHKRLIKGTGGAVQDS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggacaatgtgctgcggagcttcagagttgctaaggtgtttcgagaaaac
tcagacaaaattaactgcttcgatttcagttcaaacggagagacgattatttccagcagc
gacgacgactcgctagtcttgtacgactgccaagagggaaaacccaagaggactctctac
agtaaaaagtacggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatacaatccgatacctgtccctccatgacaacaaatacatc
cgttactttcctggacataacaaaagagtgacatctctctccatgtctcctgtggatgac
acatttatttctggctcattagataaaactatcagactatgggatctgcggtcacctaac
tgccagggtctgatgcacctgcaggggaagccagtgtgttcctttgatccggagggtctc
atttttgctgctggaataaattcagaaatggttaaactttatgacctgcggtcatttgac
aagggtccctttgcaaccttcaagcttcagtatgatcgaacgtgcgagtggacaggactc
aagtttagcaatgatggcaaactcattcttctttctactaatggcggagcacttcgaatt
ttagatgccttcaagggcgctgtgctacattccttcgggggctacaacaacagtaaaggt
gtgacactggaggcctcattcactccagactctcagtttgtcatgattggctctgaggat
ggaaagatccacgtgtggaacgcagagagtggcatgaaggtggctttattagacggaaag
cacacgggtcccatcacctgcctgcagttcaacccaaagttcatgacgtttgctagtgcc
tgctccaacatgctggtgctgggggcctacagagagccgaagcagagctgggaccgggac
tatgatcacttcctgcttcctctcctggacgaccaagagccctgctacgtgctgtaccgc
ctcgactcccagaacgcacagggctatgagtggatcttcatttcatggtctccggaccaa
tctcctgtgaaacagaaaatgctgtacgccgccacccgggccacagtgaagaaggagttc
ggtggcggtcacgtgaagtacgagctgttcggcacgactgaggaggacgtctgtttgatg
ggctaccagcgtcacgtgtcatcctgctcgggtcctgcccccctcacagtagccgagcag
gagctccagaggatcaaaatcactgagggccgggttaaacaggtgaacacagatgtcggc
gtggagagtaagccccagacgcttcagggcctcgcctttcccctgcaggagacggccaga
cgagccctgcagcagctcgcccaaaaacgcatcaactacatacagctgaggttggacgta
aacaaggagacaattgagctggtccactcaaacccgacagaaactcgagatttgcctcgc
agagttccccaagacactcccagataccacttcttcctgtacaaacactcccacgaagga
gactacctggaatctgtcgtgttcatatactccatgccaggatacaactgcagcattaag
gagcggatgctgtattccagctgcaagagccgactactggaggacgtggagaaggattac
catttggaagttgctaaaaagctggagattgacaatggagaggaactgacagaggacttt
ctgtacgatgaggtccatcccaagcagcacgcccacaagcaggccttcgctaagccccgg
ggccctgcaggaaaaaggggacacaagcgccttatcaaggggacgggaggggctgttcag
gacagttag
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