KEGG   Mugil cephalus (flathead mullet): 125006401
Entry
125006401         CDS       T08342                                 
Name
(RefSeq) twinfilin-2-like
  KO
K14962  COMPASS component SWD2
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125006401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcep03019]
    125006401
   03036 Chromosome and associated proteins [BR:mcep03036]
    125006401
Messenger RNA biogenesis [BR:mcep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     125006401
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     125006401
    COMPASS/SET1 complex (yeast)
     125006401
SSDB
Motif
Pfam: Cofilin_ADF WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 MinC_C Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 125006401
NCBI-ProteinID: XP_047438323
LinkDB
Position
4:complement(7208363..7219658)
AA seq 622 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMLVLGAYREPKQSWDRDYDHFLLPLLDDQEPCYVLYRLDSQNAQGYEWIFISWSPDQ
SPVKQKMLYAATRATVKKEFGGGHVKYELFGTTEEDVCLMGYQRHVSSCSGPAPLTVAEQ
ELQRIKITEGRVKQVNTDVGVESKPQTLQGLAFPLQETARRALQQLAQKRINYIQLRLDV
NKETIELVHSNPTETRDLPRRVPQDTPRYHFFLYKHSHEGDYLESVVFIYSMPGYNCSIK
ERMLYSSCKSRLLEDVEKDYHLEVAKKLEIDNGEELTEDFLYDEVHPKQHAHKQAFAKPR
GPAGKRGHKRLIKGTGGAVQDS
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagagttgctaaggtgtttcgagaaaac
tcagacaaaattaactgcttcgatttcagttcaaacggagagacgattatttccagcagc
gacgacgactcgctagtcttgtacgactgccaagagggaaaacccaagaggactctctac
agtaaaaagtacggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatacaatccgatacctgtccctccatgacaacaaatacatc
cgttactttcctggacataacaaaagagtgacatctctctccatgtctcctgtggatgac
acatttatttctggctcattagataaaactatcagactatgggatctgcggtcacctaac
tgccagggtctgatgcacctgcaggggaagccagtgtgttcctttgatccggagggtctc
atttttgctgctggaataaattcagaaatggttaaactttatgacctgcggtcatttgac
aagggtccctttgcaaccttcaagcttcagtatgatcgaacgtgcgagtggacaggactc
aagtttagcaatgatggcaaactcattcttctttctactaatggcggagcacttcgaatt
ttagatgccttcaagggcgctgtgctacattccttcgggggctacaacaacagtaaaggt
gtgacactggaggcctcattcactccagactctcagtttgtcatgattggctctgaggat
ggaaagatccacgtgtggaacgcagagagtggcatgaaggtggctttattagacggaaag
cacacgggtcccatcacctgcctgcagttcaacccaaagttcatgacgtttgctagtgcc
tgctccaacatgctggtgctgggggcctacagagagccgaagcagagctgggaccgggac
tatgatcacttcctgcttcctctcctggacgaccaagagccctgctacgtgctgtaccgc
ctcgactcccagaacgcacagggctatgagtggatcttcatttcatggtctccggaccaa
tctcctgtgaaacagaaaatgctgtacgccgccacccgggccacagtgaagaaggagttc
ggtggcggtcacgtgaagtacgagctgttcggcacgactgaggaggacgtctgtttgatg
ggctaccagcgtcacgtgtcatcctgctcgggtcctgcccccctcacagtagccgagcag
gagctccagaggatcaaaatcactgagggccgggttaaacaggtgaacacagatgtcggc
gtggagagtaagccccagacgcttcagggcctcgcctttcccctgcaggagacggccaga
cgagccctgcagcagctcgcccaaaaacgcatcaactacatacagctgaggttggacgta
aacaaggagacaattgagctggtccactcaaacccgacagaaactcgagatttgcctcgc
agagttccccaagacactcccagataccacttcttcctgtacaaacactcccacgaagga
gactacctggaatctgtcgtgttcatatactccatgccaggatacaactgcagcattaag
gagcggatgctgtattccagctgcaagagccgactactggaggacgtggagaaggattac
catttggaagttgctaaaaagctggagattgacaatggagaggaactgacagaggacttt
ctgtacgatgaggtccatcccaagcagcacgcccacaagcaggccttcgctaagccccgg
ggccctgcaggaaaaaggggacacaagcgccttatcaaggggacgggaggggctgttcag
gacagttag

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