Mugil cephalus (flathead mullet): 125006405
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Entry
125006405 CDS
T08342
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep00450
Selenocompound metabolism
mcep00970
Aminoacyl-tRNA biosynthesis
mcep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125006405 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125006405 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcep01007
]
125006405 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125006405 (mars1)
Enzymes [BR:
mcep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
125006405 (mars1)
Amino acid related enzymes [BR:
mcep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125006405 (mars1)
Transfer RNA biogenesis [BR:
mcep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125006405 (mars1)
Prokaryotic type
Other AARSs
125006405 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C
GST_C_3
GST_C_2
HTH_23
tRNA-synt_1e
GST_N_3
GST_N_2
GST_N
Motif
Other DBs
NCBI-GeneID:
125006405
NCBI-ProteinID:
XP_047438327
LinkDB
All DBs
Position
4:complement(9159585..9176727)
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AA seq
923 aa
AA seq
DB search
MKLFVSEGNPHCLKVLVAVEVTGVQCDVQYVNHEENVVPFLSRPALPALLLPSGLHLFSA
NAICRYLFEVNGQESSDLCNQWLEWEARDLQPALLQALHMAVLQGKGSEVSKVLQGPLNV
LDQSLSKGSVLYLTGEAVSLADVVLWAALYPVLSEPSLTVGEHKSLKAWFDRVTSVRGCL
PAAQKVLQGKGLQGMKSYMQRQPAPQSSQCRDTQPCNSNPAECEESERFVSEEEMEAAVL
TWRKDLNTDPVATSRQHPILPQEGRRNILVTSALPYVNNVPHLGNIIGCVLSADVFSRYG
RLRGWNMLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQVDFDFFGRTT
TEKQTEIAQNIFWRLHERGFLVEDTVEQLRCESCQRFLADRFVEGICPHCSYPEARGDQC
DKCGRLINAVELREPQCKVCKRTPIIRSSKHLFLDLPKLESQLEQWLDKSTSTGDWTANA
KQITRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDKWEK
WWKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSR
GVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMAMKNNSELLNNLGNFINRAG
MFVTKFFEGCVPAMELQQEDKKLLALVGWELQQYIQLMDKVKIRDALKHILNISRHGNQY
IQVNEPWKNIKGGDTERQRAGTVTGVSVNIACLLSVMLSPYMPAVSQIIRDQLNAPQSCI
DTMLQGSGSFVCALRAGHRIGRVSPLFQKLEADQIESLKKRFGGQQPEDEPTQKKNAASA
QPAAAPASPAAEVATENRADPEKAKQLTQAVAEQGEKVRALKAQKAEKAVVTAEVAKLLD
LKKQLALAEGKSPEPAPQKGKKK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgtaagtgaaggtaacccgcactgtctcaaggtgttagttgcggtggaa
gtgacaggagttcagtgcgacgttcagtatgtcaaccacgaagaaaacgtggtgcctttc
cttagccgtccagcgttgccagctctgctcctgcccagcggactacacctattcagtgcc
aatgccatttgcagatacctgtttgaagtaaacggacaagaatccagtgacctttgcaat
cagtggctggaatgggaggccagagatcttcagcctgcactgctgcaggctcttcacatg
gcagtgctgcagggaaagggttctgaggtgtccaaggtcctccagggccccctaaatgtc
ttggaccaaagcttgagcaaggggagcgtgctatatcttactggggaagctgtttcactt
gctgatgttgtgttgtgggctgcactgtaccctgttttgtctgaaccttcactaacagtt
ggtgaacacaagtctttgaaagcctggtttgaccgtgtgacttctgtgcgcggttgtctg
cctgctgctcagaaagtgcttcagggaaaaggcctgcagggcatgaagagctacatgcag
aggcagcctgcccctcagagcagccagtgcagagacacacagccatgcaacagcaaccct
gctgagtgcgaagaaagtgagcgttttgtttcagaagaggaaatggaagcagctgttctc
acatggaggaaggatctgaacaccgaccctgtcgctacaagcagacaacacccaattttg
ccacaggagggcaggcgaaacatcctggtgaccagtgctttgccttatgtcaacaatgtc
ccccatctgggcaacatcattggttgtgtcctcagtgctgacgtcttctcaaggtatggg
cgcctgcgaggctggaacatgttgtttgtgtgtggcacagacgagtacggcacagctaca
gagaacaaggccagagaggagggcctgacaccgcagcagatctgcgataagtaccacgct
gttcactccagcatctacaaatggttccaggtcgacttcgacttctttggcaggaccacc
acggagaagcagaccgagatagctcagaatattttctggcgactccacgagcgcggcttc
ctagtagaagacaccgtggagcagctacgctgtgaaagctgtcagcgtttcctggccgac
cgcttcgtggaaggcatctgtccacactgcagctacccagaagctcgcggtgatcagtgt
gacaaatgtgggcggctcatcaacgctgtggagctcagggaaccacagtgtaaagtctgc
aagcggactcccatcattcgttcctccaaacaccttttcctggacctgccaaagctagaa
agtcagttggagcagtggctggacaagtcaaccagcacaggagactggacagcaaatgcc
aaacagatcacccgctcctggctgagagatggactcaaacctcgttgcatcaccagggac
ctgcagtggggaacaccagtgcctcaccctgactttaaagagaaggtgttctacgtgtgg
tttgacgcccccatcggttatctgtccattaccgccaactacactgacaaatgggaaaaa
tggtggaagaatcctcatcaggtggagctgtacaacttcatggccaaagataatgtgccg
ttccacagtgtggtgttcccatgctccctactgggagcccaagacaactacacccttgtc
aatcacctcgttgccactgaatatctgaattacgaggacacgaagttctccaagagccgt
ggcgtgggtgtgttcggagacatggcaaaggacacgggcatcccgtctgatgtgtggcga
ttctacctcctctacgtgcgtccagagggacaggattcagctttctcttgggccgacatg
gctatgaagaacaactccgagctgctcaacaacctgggaaacttcatcaacagagccggc
atgtttgtcactaagttctttgaaggctgcgtgcctgcgatggagctacagcaggaagat
aagaagctcctggctctggtgggctgggagctgcagcagtacatccagctcatggacaaa
gtcaaaatccgcgacgccttgaaacacatcctgaacatctctcgccatggcaaccagtac
attcaggtcaatgaaccctggaagaatatcaagggaggtgacacggagaggcagcgtgcg
ggcacagtgactggtgtctccgtgaacatcgcctgcttgctgtcggtgatgctctctccg
tatatgccagcagtcagccagatcatccgggatcaactcaatgcccctcagtcgtgcata
gatacgatgctccaaggcagcggcagcttcgtgtgcgccctgagagccggccaccgcatc
ggcagggtcagcccgttgttccagaaactggaggcggaccagattgagtctttgaagaag
agatttggcggacagcagcccgaagatgaaccaactcaaaagaagaacgctgcgagcgct
cagcctgctgctgcgccagcttctcctgcagctgaggtggcgacagagaacagagcggac
ccggagaaagccaagcagctcacacaggctgtggctgagcagggggaaaaggttcgcgca
ctcaaagcccagaaagcggagaaggctgtggtcacagcagaggtggccaaactgttggac
ctgaagaaacagctggccctcgctgaggggaagagccctgagcctgcacctcagaagggc
aagaagaagtga
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