Mugil cephalus (flathead mullet): 125006584
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Entry
125006584 CDS
T08342
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03013
Nucleocytoplasmic transport
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125006584 (ddx19b)
03015 mRNA surveillance pathway
125006584 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125006584 (ddx19b)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125006584 (ddx19b)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125006584 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
125006584
NCBI-ProteinID:
XP_047438704
LinkDB
All DBs
Position
4:complement(23006669..23015862)
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AA seq
490 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKDKPEENEYFTLGRAANATDSTSAAAKSEGDKPAD
EDDKDDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYG
MGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCLCVS
PTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFK
FIDPKKVKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIV
PDPNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWL
AGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFD
LPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIEKLDTD
DLDEIEKIAS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcggtggacgagcaagaagccgcggcggaatctatc
ggcagccttcaaataaaagataaaccagaggaaaatgagtactttactttaggtcgggcg
gcaaacgcaacggactccaccagtgcagctgcaaagtcagaaggagataaacctgcagat
gaagacgacaaagacgacaaagcggcacagtcgttgttaaacaagctgatacgaaataat
ctcgtcaatacaacaaatcaagtggaagtccttcagaaggatcccaactccccgctctac
tcggtcaagtcctttgaagagctgcggctcaaaccgcagctgcttcagggagtgtacggc
atgggtttcaaccggccctccaaaatccaggaaactgccttacctatgatgctggctgag
cctccacagaatctgattgctcagtcgcagtcaggaacagggaaaaccgctgcctttgtc
ctggccatgctcagccacgtagaccccaacaacagatacccccagtgcctgtgtgtgtca
cccacttatgagctggcgcttcagactggcaaggtgatcgagcagatgggcaaacattat
cccgaggtccagctagtctacgccattagaggaaacaaattgcagcggggaatgaaactg
caggaacagatagttattggcacacctggcaccatgctggactggtgcagtaaattcaag
tttatagaccccaagaaggtcaaagtctttgtgctggatgaggctgacgtcatgatcgcc
acacagggccaccaggaccagagtatccgcatccaaaggatgctgccaaaaaactgccag
atgttgctgttctcagccacgtttgaagagtcggtgtggaactttgctcagcgcattgtg
cctgatcccaacatcatcaagctgaagagagaggaggagactctggacaccatcaaacag
tactatgtgctgtgcaactgcaaggaggagaagttccaagccctgtgtaacatctacgga
gccatcaccattgcccaggccatgatcttctgccatacaaggaagactgcaggctggctg
gctggggagctgtccagagaaggccaccaggtggcgctgctcagcggagagatgcaggtg
gagcagagggccgccgtcatcgagcgcttcagagatggaaaggagaaggtcctggtcact
acgaatgtttgtgctcgaggcatcgacgtggagcaggtttccgtggtgatcaactttgac
ctgccggtcgacaaggacggtaaccctgacaacgagacgtacctgcacaggatcggacgc
acgggccgattcgggaaaaggggcctggccatcaacatggtggacagcaagatgagcatg
aacatcctaaacaggatccaggagcatttcaataaaaaaatcgaaaaactagacacagat
gatctggatgaaattgagaaaattgccagctaa
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