Mugil cephalus (flathead mullet): 125006740
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Entry
125006740 CDS
T08342
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125006740 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125006740 (smarcc2)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125006740 (smarcc2)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125006740 (smarcc2)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125006740 (smarcc2)
PBAF complex
125006740 (smarcc2)
GBAF(ncBAF) complex
125006740 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
125006740
NCBI-ProteinID:
XP_047439019
LinkDB
All DBs
Position
4:complement(1217581..1229307)
Genome browser
AA seq
1077 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPIPATEEGNPAKTN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEAGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQVHKHSHANTHIEAQIVGYFTFVPLSLQTPATQQMIPFPDKVKDKPADLQNFGL
RTDMYTKKTGSVKSKSAASSMREWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECIL
HFLRLPIEDPYLEDTSSTLGPLAYQPIPFSQAGNPVMSTVAFLASVVDPRVASAAAKSAL
EEFSRMKEEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGERPEESSDE
SKSDSQSNEEKREAKDSKDGAIEEEEKQAENGKKEEERGREAEGEREADKTESEMGDGEK
EKDGKEGTEEGQREGDSEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEM
RARQQHFQQIQHQQHSQTGGPHTNQATPGPQPQGLAATQQAPTTPAPQPAPSPAPQASSA
PAPESQTPTGAHTSPPCPPGQALPPHSSSSTTPVLHEPSAPIPGETLHASAPVPPPQ
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttcacagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gctgagccccccaccaacaagtctctctccagtctggtggttcaattgctgcagttccag
gaagaggtgttcggtcggcacgtcagcaaccctccactcaccaagctgccaatgaaatgt
ttcctggacttcaagtcaggaggggctctgtgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccttcgaggatggaccgaaat
gtggagatgttcatgaccattgagaagtccttagtgcagaacaactgcttgactagacct
gtcatctacctgagtcctgacattgagcctaaactgttagggaaactgaaagacatcatc
aaaagacatcagggctcagtgactgaggacaaggcctccagctcccatgttgttgtgcct
attcctaccagtctggaggaagaggagtgggtgcgtcctgtgatgaagcgagacaagcaa
gtgctcctccactggggatattttcctgacagttatgacacctggatcccagccagtgaa
attgaggcagcagtggaggatcctcccagccccgaaaagcccaggaaggttcatgcaaag
tggattttagacctggaccagtataatgagtggatgaacgaggaggactacgaggtggga
gagggctgcccaaaaaggaaaaggatttcagccaagaccctgacagatgaggtgaccacg
cctgatgagcggagggacaagaaacccggcagtgccaagaagaggaagcgttcgccatcg
ccgtctcccacccctccacctcaagagagcaagaagaagaacaccaagaaagggccaacg
accccgtacaccaagtctaaacggggccagagggaggaggaacaggaggatctgtccaag
gatttggatgaagcgtcacctattcctgcgactgaagagggaaacccagcaaagacaaat
aacacaaagaaggactctgattcaaccccagtcaaaggggggacagatatggatgagcag
gaggatgaatccatggaaacgacaggaaaagaggaggaagcaggttctccgagtgtgaag
ggagaaccagtgaagggctcagacctgcacgaggacaacgtgacagagcaaacccaccac
atcatcataccgagctacgccgcctggttcgactacaacagcgttcacgccattgagcgc
agagccctgccagagtttttcaatgggaagaacaaatccaaaactccagagatttatttg
gcatacaggaacttcatgatcgacacctaccgactgaaccctcaggagtacctgacctcc
actgcctgccgtaggaacctggcgggggatgtgtgcgctatcatgagagtccacgccttt
ctggagcagtggggtcttatcaattaccaggtggactctgagagccggcctacacccatg
ggtcccccacccacctctcacttccatgtcttggctgacaccccatccagcctggtgccc
ctgcagcccaagacgtctcaggtacataaacattcacacgcaaacactcacatagaagca
cagattgtaggttatttcacatttgttcctttgtcactgcagacccctgctacgcagcag
atgataccgttcccagataaagtgaaggacaagccggcagacctgcaaaactttgggctg
cggactgacatgtacaccaagaagactggctctgtaaagagcaaaagtgcagcaagctct
atgagggagtggacagagcaagagacactactactacttgagggtttggagatgtacaaa
gatgactggaataaggtgtctgaacatgtgggcagccgtacacaggatgagtgcatcctg
cacttcttgcggttgcccattgaagacccatacttagaggacacctcctcaaccctgggc
ccattggcctaccagccgatacctttcagccaagcaggaaaccctgtcatgagcaccgtg
gccttcctcgcctccgtcgttgacccgcgcgtggcctcagccgctgccaaatctgcactc
gaggaattttctcgtatgaaggaggaggttccagcagcgcttgttgaggcccatgtgcgg
cgggtggaggaagcagcaagggtcagcggtcgacaggaccctttgtatgggctggagggt
agtggcatcgcaggcactggcctagaggaaggagaaaggccagaggaaagcagtgatgaa
agtaagagtgacagccaatcaaatgaggagaagagagaagccaaggacagcaaagatgga
gcaattgaggaagaggagaagcaggcagagaatgggaagaaggaagaagaaagaggaagg
gaagctgagggagagagggaggcggacaaaacggagtctgagatgggcgatggtgagaag
gagaaggatggaaaagagggaacagaggagggacaaagagaaggggacagtgagggagaa
aggaaggcaaaggtggaacgtgatgtcggagaggggaacctggcaactgctgctgcctct
gctctagcagctgctgctgtcaaagccaagcatcttgctgcagtggaagagagaaagatc
aaatctctggtggctctcctggtggagactcagatgaagaagcttgagatcaaactgcgg
cactttgaagaactggaaaccatcatggacagagagcgggaggctttggaataccagcgt
cagcagcttctggctgaccgtcagtccttccacatggagcagctgaaatacgctgaaatg
agggctcgccagcagcacttccagcagattcagcaccagcagcacagccagactgggggc
cctcacaccaaccaggcgacgccagggccccagccccaaggcttggctgcaactcagcaa
gcccccaccacaccagcgcctcagccagccccaagccccgcaccacaagcttcttcagcc
ccagctccagagtcccaaacacctacaggtgctcacacctcccccccttgcccgccaggc
caggccctgcctcctcactccagctcgagcactacacctgtactccacgagcctagcgcc
cctattcccggagagacgctccatgcctcagctccagtacctcccccacaatga
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