KEGG   Mugil cephalus (flathead mullet): 125006759
Entry
125006759         CDS       T08342                                 
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
  KO
K11757  protein polybromo-1
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125006759 (pbrm1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcep03021]
    125006759 (pbrm1l)
   03036 Chromosome and associated proteins [BR:mcep03036]
    125006759 (pbrm1l)
Transcription machinery [BR:mcep03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125006759 (pbrm1l)
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    125006759 (pbrm1l)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 125006759
NCBI-ProteinID: XP_047439058
LinkDB
Position
4:6319316..6330127
AA seq 1652 aa
MSSSSKRRRATSPSSSISGGGDLDDTSSSTPGSGRKRRRISNVPPVDTVAVCHELFNAVR
DYKDDQGRQLCEVFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEDYTDVEQLTTDFQL
MFRNARSFYKADSEEYQAACKLWEVYLQTRNEFVQPGDGDEDDEDGDDMMDNSGIPPEDE
TSAGSLKEVLEQLLEAIVSYTDPSGRVISELFQKLPSKVHYPDYYAVIKEPINLRMISQR
IQIGYYKTVNAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSS
LRIRNRRSGQGDQLSGVSVALQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIF
QLYEAVRGARNNQGQLFSEPFQQLPSRREYPDYYQQIKHPISLQQIRSKMKNGEYESVDQ
IDADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELLRRDEEDGDSILSSDAGSIK
RKSHKKNVKKNRMKSLYAAVTEAREAGTGRRLCELFMVKPSKKDYPDYYTVILEPMDMKT
IEHNIRNERYVTEEALMDDMKLMFRNARHYNEEGSQVYNDADILEKILKDKRKELGPPPE
EDDMGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRA
ELPDYYATIKRPIDMERLRSHMAAGRYQDVEALVEDFALMFNNACIYNEPESLIYRDALV
LHRVLLETRKQQEGAEDSAPPAVGSLVRELIRNLFVSVMGHQDEEGRCYSDSLAEVPAVD
PASPEKPPLNFDIIRMNVERGRYRRLDVFQEHMFEVLEKARRLNRTDSEIFEDSVELQQF
FIKIRDELCKNGEILLSTAVNYTFKHLHSDVDQEKREKIPKEIEEDKQKKEEDEDKDKEG
EKAEDLPGEDWQSESESERVYVQDCSFENVTYHVGDFVYVEPSEAKLQPHIVCIERLWED
EAGEKWVYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKILGKCVVIFVKDYFKM
QPEGYRAEDVYVCESRYAARNKSFKKIKIWAMPESSVKLVPREVPLPVVRVASMFAKPNQ
EKLAMSYVASGGFVEKEREDVPMEMSGADPGCQHYEQLRYNNMWFKVGDCVYIQSHGLSK
PRVARMEKLWVQNGTAFLFGPIFIHPEETEHEPTKMFYKREVFLSHLEETLPLTCVIGKC
TVSSFKDYLSCRPTEFSEDDVLLCESRYIESEKQMKKFKGLKRFSFSSKVVEDEIYYFRK
LIVPQKEASPFLDKKIDELELKLADMEDADEDMDDMDDEEEAPETPSLPQLQTPHAVDMD
VMPYTPSQVPCIHLNPIYAQTAVGSFKKCTIFSYTCVFFMKATPKIKGLSKKEGAKRKIN
MSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKAEYEERAAKIVDQQERD
RPPQKQASPRAGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPHLLPHHLQQGMPGYP
GMPHQGMMGTGMNGMAGSPATGNFMQQPGMFSPGQHAPPPYPGQGQLGQPSHLQPTTPMF
VAPPPKTQRVLHSEAYLKYIEGLHSESGTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLK
SKGAHTTMADALWRLRDLMLRDSLNMCQAHNL
NT seq 4959 nt   +upstreamnt  +downstreamnt
atgtcatcgagctccaagaggagacgagccacttctccctccagcagtatcagcggagga
ggagacctcgatgatacctcctcttctactcctggaagtggcaggaaacgaagaaggata
tccaatgttcctccagtagatacggtcgctgtgtgccatgagctgttcaatgctgtaagg
gactacaaggacgatcaagggaggcaactttgtgaagttttcctcagggtaccaaagagg
aggaatcagcctgattattatgaagtggtgtcccagccgattgatatgacaaaaatccaa
tacaaactgaagtctgaggattatactgatgtggagcagcttactacagattttcagctc
atgttcaggaatgccaggtcattttacaaggcggacagtgaggagtatcaagctgcgtgc
aagctctgggaggtatatttacaaacaaggaatgagtttgtgcagcctggagatggagat
gaggatgatgaagatggcgatgacatgatggataattcaggaataccacctgaagatgag
acctcagctggcagtttgaaagaagtgctcgagcaactcttggaggccatagtgtcatac
actgatccctcagggcgcgtgatcagtgaactgttccagaaactgccctccaaagtgcat
tatccagactactatgccgttataaaggagccaataaatctgagaatgatctctcaaaga
atacagataggatattataaaacagtcaatgccatggccaaggacatagacctaatggcc
aaaaatgccaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacaccata
aagaaagtcttcatccagcggaagacagagcttgaacacgcggaacccactaaatcaagt
cttcgcatcagaaatcgcaggtctggccagggggatcaactttctggtgtgagcgtagct
cttcagtatggctcggagagtgaggacgaccccgtgctctcgggctccgtgtgctacgat
gagggagagtcggaggctgagagccagagttcaagcatggagatgagcaacccaatcttc
caactgtatgaagctgtgaggggtgccaggaataaccagggccaactcttctctgaaccc
tttcagcaactgccctctcgcagggaatatcctgactattatcagcaaataaaacacccc
atctctctgcagcaaatcaggtcaaagatgaagaatggcgagtatgaaagtgtggatcag
atagatgctgacctcaatctgatgtttgagaacgcaaagcgctacaacatgcctaactca
agcatttacaaacgcgccttcagactccagcagattatgcaggcaaaaaagagggagctt
ctaaggcgagatgaagaagatggagacagtattctgtcgtctgatgcaggcagcatcaag
aggaaaagccacaagaaaaatgtcaaaaagaatcgaatgaaatccttgtacgctgcggtc
accgaggccagggaggcgggcaccggtcgacgtctctgtgagctctttatggttaaacca
tccaagaaggactaccctgactactacactgtcatcctcgaaccgatggacatgaaaacc
attgagcacaacattcgcaatgaacgctatgtcacagaagaagctctgatggacgacatg
aaactgatgtttcgcaacgcccggcattacaatgaggagggatctcaggtttacaatgat
gctgacattctggagaagatactgaaagataagcgcaaagagttaggcccaccacctgaa
gaggatgatatgggatctcccaaactgaaactcagaaagagtggtgtgtctccaaagaaa
tccaaatacctcacccctcttcagcagaggttgaatgagctctacgatgctgtccgaaac
ttcaccgaccgccgaggtcgccgcctaagtacaatcttcctccgcctgccctctcgtgcc
gagttgcccgactactatgctacaatcaagagacccattgacatggagcgcctgcggagc
cacatggcggcaggtcgttaccaggacgtcgaagctctggtggaggactttgctctcatg
ttcaataatgcctgcatttacaatgagcccgaatctctgatctatcgggacgctcttgtg
ttgcaccgagtgctgctggagacgcgcaagcagcaagagggagctgaggactctgcgcct
cctgctgtgggatcgctggtgcgagagctgatcaggaacctgtttgtgtccgtgatgggc
caccaggacgaagagggccgatgctatagtgactcactggctgaggttcctgctgtggat
ccagcttcccctgaaaagccgccacttaactttgatatcatcaggatgaatgtggagcgc
ggccgctacaggaggctggacgtgttccaggaacacatgttcgaagtgctcgagaaggcg
aggaggctgaacaggacagactctgagatatttgaggattcggtggagctgcaacagttt
ttcatcaagatcagggatgagctatgcaaaaacggagagatcctgctgtccactgcggtc
aactacacgttcaaacacctgcacagcgacgtagaccaggagaagagggagaaaatcccc
aaagagattgaggaagacaagcaaaagaaggaggaagacgaggataaagacaaagaaggc
gagaaagccgaggacctgccgggagaggactggcagtcggagtcggagtctgagcgcgtg
tacgttcaggactgcagctttgaaaatgtgacctaccacgttggagacttcgtctacgtg
gagccgtcagaagcaaagctgcagcctcacattgtctgcatcgaacgtctgtgggaggat
gaagctggtgagaagtgggtgtatggctgctggttctacagaccaagtgaaacctttcac
ttggccactcgtaagttcctggagaaagaggtcttcaagagcgactactacaacaaagtg
tccatcagtaaaatcctgggcaaatgtgtggttatttttgtgaaggattatttcaaaatg
cagcccgagggctacagagctgaggatgtgtacgtgtgcgagtcccgctacgctgccaga
aataagtccttcaagaagatcaagatatgggccatgcccgagagctctgtgaaattagtc
cctcgggaggtgcctctgcctgttgtccgcgtagcttccatgtttgccaaacccaaccag
gagaaactggcaatgtcctacgtggcgagtggcggtttcgtggagaaggagagagaagac
gtcccgatggagatgagcggagccgatcccggctgtcagcactatgaacagttacgctat
aacaacatgtggtttaaagtgggagactgtgtttacatccagtcacatggtctgtccaaa
ccacgggttgccaggatggaaaagctgtgggtgcagaatggaacagctttcttattcgga
cccatcttcattcatcctgaagaaaccgagcatgagcccacgaagatgttttacaagaga
gaagtgtttttgagtcatctggaggagaccttgcccttgacctgtgtcataggaaaatgc
acagtgtcctcatttaaggactacctgtcatgcagacctacagagttttcggaggacgac
gtcctgctgtgcgagagccgctacattgaaagtgagaaacagatgaaaaagttcaagggc
ctgaagcgcttctcattctcctccaaagtggtggaggatgagatctactatttcaggaag
ttgatagtgccacagaaggaagcttcgccgtttttggataagaagattgatgagctggag
cttaaactggctgatatggaggatgcagatgaagatatggacgacatggatgatgaggag
gaggctccggagacgccttccttgcctcagttgcaaacccctcatgcagtagacatggac
gtcatgccatacacgccgtcacaggtaccctgcatacaccttaacccaatatatgcacaa
acagctgttggcagttttaaaaaatgcacaatattttcttacacgtgtgtctttttcatg
aaggccactcctaaaataaagggcctgtcaaagaaggaaggcgcaaagaggaagatcaac
atgagcggttacattctgttcagcagtgaaatgcgagccgtcatcaaagctcgacaccca
gacttctcattcggggagctgagtcgtctggtcggcacagagtggaggaatctcgaagct
tctaagaaagcggaatacgaagaacgtgcagccaaaatagtagaccagcaagaacgtgac
aggccgccccagaagcaagcatcccctagagcaggcatgatgggagcttacggcccacct
tacatgcccatgcagggcccccatgagggtttgctgagtgtggccccaatgccacctcac
cccgcagggggtcctcaccttctacctcaccatctccagcaaggtatgcctgggtaccct
ggcatgcctcatcagggtatgatgggcactggtatgaatggcatggcaggaagtccagca
acaggaaactttatgcaacagcctgggatgttcagcccaggacaacatgctcctccacca
tatccaggacagggtcagttgggccagccctcacatttgcagcccaccactccaatgttt
gtggctccaccaccaaagacccagagggtgctccactcagaggcctacctgaagtacatt
gaaggcttacattcagagtccggcaccgtcagcaagtgggaccagactctgaaagctcaa
aggcgagatgctcacctgaccaaagagcaggagagtcggctgccagctcactggctgaag
agcaaaggagcccacaccactatggcggatgcgctgtggcgtctgcgtgacctcatgctt
agagactctctgaacatgtgtcaggctcacaacctgtaa

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