Mugil cephalus (flathead mullet): 125006759
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Entry
125006759 CDS
T08342
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
KO
K11757
protein polybromo-1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125006759 (pbrm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125006759 (pbrm1l)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125006759 (pbrm1l)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125006759 (pbrm1l)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
125006759 (pbrm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125006759
NCBI-ProteinID:
XP_047439058
LinkDB
All DBs
Position
4:6319316..6330127
Genome browser
AA seq
1652 aa
AA seq
DB search
MSSSSKRRRATSPSSSISGGGDLDDTSSSTPGSGRKRRRISNVPPVDTVAVCHELFNAVR
DYKDDQGRQLCEVFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEDYTDVEQLTTDFQL
MFRNARSFYKADSEEYQAACKLWEVYLQTRNEFVQPGDGDEDDEDGDDMMDNSGIPPEDE
TSAGSLKEVLEQLLEAIVSYTDPSGRVISELFQKLPSKVHYPDYYAVIKEPINLRMISQR
IQIGYYKTVNAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSS
LRIRNRRSGQGDQLSGVSVALQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIF
QLYEAVRGARNNQGQLFSEPFQQLPSRREYPDYYQQIKHPISLQQIRSKMKNGEYESVDQ
IDADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELLRRDEEDGDSILSSDAGSIK
RKSHKKNVKKNRMKSLYAAVTEAREAGTGRRLCELFMVKPSKKDYPDYYTVILEPMDMKT
IEHNIRNERYVTEEALMDDMKLMFRNARHYNEEGSQVYNDADILEKILKDKRKELGPPPE
EDDMGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRA
ELPDYYATIKRPIDMERLRSHMAAGRYQDVEALVEDFALMFNNACIYNEPESLIYRDALV
LHRVLLETRKQQEGAEDSAPPAVGSLVRELIRNLFVSVMGHQDEEGRCYSDSLAEVPAVD
PASPEKPPLNFDIIRMNVERGRYRRLDVFQEHMFEVLEKARRLNRTDSEIFEDSVELQQF
FIKIRDELCKNGEILLSTAVNYTFKHLHSDVDQEKREKIPKEIEEDKQKKEEDEDKDKEG
EKAEDLPGEDWQSESESERVYVQDCSFENVTYHVGDFVYVEPSEAKLQPHIVCIERLWED
EAGEKWVYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKILGKCVVIFVKDYFKM
QPEGYRAEDVYVCESRYAARNKSFKKIKIWAMPESSVKLVPREVPLPVVRVASMFAKPNQ
EKLAMSYVASGGFVEKEREDVPMEMSGADPGCQHYEQLRYNNMWFKVGDCVYIQSHGLSK
PRVARMEKLWVQNGTAFLFGPIFIHPEETEHEPTKMFYKREVFLSHLEETLPLTCVIGKC
TVSSFKDYLSCRPTEFSEDDVLLCESRYIESEKQMKKFKGLKRFSFSSKVVEDEIYYFRK
LIVPQKEASPFLDKKIDELELKLADMEDADEDMDDMDDEEEAPETPSLPQLQTPHAVDMD
VMPYTPSQVPCIHLNPIYAQTAVGSFKKCTIFSYTCVFFMKATPKIKGLSKKEGAKRKIN
MSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKAEYEERAAKIVDQQERD
RPPQKQASPRAGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPHLLPHHLQQGMPGYP
GMPHQGMMGTGMNGMAGSPATGNFMQQPGMFSPGQHAPPPYPGQGQLGQPSHLQPTTPMF
VAPPPKTQRVLHSEAYLKYIEGLHSESGTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLK
SKGAHTTMADALWRLRDLMLRDSLNMCQAHNL
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagctccaagaggagacgagccacttctccctccagcagtatcagcggagga
ggagacctcgatgatacctcctcttctactcctggaagtggcaggaaacgaagaaggata
tccaatgttcctccagtagatacggtcgctgtgtgccatgagctgttcaatgctgtaagg
gactacaaggacgatcaagggaggcaactttgtgaagttttcctcagggtaccaaagagg
aggaatcagcctgattattatgaagtggtgtcccagccgattgatatgacaaaaatccaa
tacaaactgaagtctgaggattatactgatgtggagcagcttactacagattttcagctc
atgttcaggaatgccaggtcattttacaaggcggacagtgaggagtatcaagctgcgtgc
aagctctgggaggtatatttacaaacaaggaatgagtttgtgcagcctggagatggagat
gaggatgatgaagatggcgatgacatgatggataattcaggaataccacctgaagatgag
acctcagctggcagtttgaaagaagtgctcgagcaactcttggaggccatagtgtcatac
actgatccctcagggcgcgtgatcagtgaactgttccagaaactgccctccaaagtgcat
tatccagactactatgccgttataaaggagccaataaatctgagaatgatctctcaaaga
atacagataggatattataaaacagtcaatgccatggccaaggacatagacctaatggcc
aaaaatgccaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacaccata
aagaaagtcttcatccagcggaagacagagcttgaacacgcggaacccactaaatcaagt
cttcgcatcagaaatcgcaggtctggccagggggatcaactttctggtgtgagcgtagct
cttcagtatggctcggagagtgaggacgaccccgtgctctcgggctccgtgtgctacgat
gagggagagtcggaggctgagagccagagttcaagcatggagatgagcaacccaatcttc
caactgtatgaagctgtgaggggtgccaggaataaccagggccaactcttctctgaaccc
tttcagcaactgccctctcgcagggaatatcctgactattatcagcaaataaaacacccc
atctctctgcagcaaatcaggtcaaagatgaagaatggcgagtatgaaagtgtggatcag
atagatgctgacctcaatctgatgtttgagaacgcaaagcgctacaacatgcctaactca
agcatttacaaacgcgccttcagactccagcagattatgcaggcaaaaaagagggagctt
ctaaggcgagatgaagaagatggagacagtattctgtcgtctgatgcaggcagcatcaag
aggaaaagccacaagaaaaatgtcaaaaagaatcgaatgaaatccttgtacgctgcggtc
accgaggccagggaggcgggcaccggtcgacgtctctgtgagctctttatggttaaacca
tccaagaaggactaccctgactactacactgtcatcctcgaaccgatggacatgaaaacc
attgagcacaacattcgcaatgaacgctatgtcacagaagaagctctgatggacgacatg
aaactgatgtttcgcaacgcccggcattacaatgaggagggatctcaggtttacaatgat
gctgacattctggagaagatactgaaagataagcgcaaagagttaggcccaccacctgaa
gaggatgatatgggatctcccaaactgaaactcagaaagagtggtgtgtctccaaagaaa
tccaaatacctcacccctcttcagcagaggttgaatgagctctacgatgctgtccgaaac
ttcaccgaccgccgaggtcgccgcctaagtacaatcttcctccgcctgccctctcgtgcc
gagttgcccgactactatgctacaatcaagagacccattgacatggagcgcctgcggagc
cacatggcggcaggtcgttaccaggacgtcgaagctctggtggaggactttgctctcatg
ttcaataatgcctgcatttacaatgagcccgaatctctgatctatcgggacgctcttgtg
ttgcaccgagtgctgctggagacgcgcaagcagcaagagggagctgaggactctgcgcct
cctgctgtgggatcgctggtgcgagagctgatcaggaacctgtttgtgtccgtgatgggc
caccaggacgaagagggccgatgctatagtgactcactggctgaggttcctgctgtggat
ccagcttcccctgaaaagccgccacttaactttgatatcatcaggatgaatgtggagcgc
ggccgctacaggaggctggacgtgttccaggaacacatgttcgaagtgctcgagaaggcg
aggaggctgaacaggacagactctgagatatttgaggattcggtggagctgcaacagttt
ttcatcaagatcagggatgagctatgcaaaaacggagagatcctgctgtccactgcggtc
aactacacgttcaaacacctgcacagcgacgtagaccaggagaagagggagaaaatcccc
aaagagattgaggaagacaagcaaaagaaggaggaagacgaggataaagacaaagaaggc
gagaaagccgaggacctgccgggagaggactggcagtcggagtcggagtctgagcgcgtg
tacgttcaggactgcagctttgaaaatgtgacctaccacgttggagacttcgtctacgtg
gagccgtcagaagcaaagctgcagcctcacattgtctgcatcgaacgtctgtgggaggat
gaagctggtgagaagtgggtgtatggctgctggttctacagaccaagtgaaacctttcac
ttggccactcgtaagttcctggagaaagaggtcttcaagagcgactactacaacaaagtg
tccatcagtaaaatcctgggcaaatgtgtggttatttttgtgaaggattatttcaaaatg
cagcccgagggctacagagctgaggatgtgtacgtgtgcgagtcccgctacgctgccaga
aataagtccttcaagaagatcaagatatgggccatgcccgagagctctgtgaaattagtc
cctcgggaggtgcctctgcctgttgtccgcgtagcttccatgtttgccaaacccaaccag
gagaaactggcaatgtcctacgtggcgagtggcggtttcgtggagaaggagagagaagac
gtcccgatggagatgagcggagccgatcccggctgtcagcactatgaacagttacgctat
aacaacatgtggtttaaagtgggagactgtgtttacatccagtcacatggtctgtccaaa
ccacgggttgccaggatggaaaagctgtgggtgcagaatggaacagctttcttattcgga
cccatcttcattcatcctgaagaaaccgagcatgagcccacgaagatgttttacaagaga
gaagtgtttttgagtcatctggaggagaccttgcccttgacctgtgtcataggaaaatgc
acagtgtcctcatttaaggactacctgtcatgcagacctacagagttttcggaggacgac
gtcctgctgtgcgagagccgctacattgaaagtgagaaacagatgaaaaagttcaagggc
ctgaagcgcttctcattctcctccaaagtggtggaggatgagatctactatttcaggaag
ttgatagtgccacagaaggaagcttcgccgtttttggataagaagattgatgagctggag
cttaaactggctgatatggaggatgcagatgaagatatggacgacatggatgatgaggag
gaggctccggagacgccttccttgcctcagttgcaaacccctcatgcagtagacatggac
gtcatgccatacacgccgtcacaggtaccctgcatacaccttaacccaatatatgcacaa
acagctgttggcagttttaaaaaatgcacaatattttcttacacgtgtgtctttttcatg
aaggccactcctaaaataaagggcctgtcaaagaaggaaggcgcaaagaggaagatcaac
atgagcggttacattctgttcagcagtgaaatgcgagccgtcatcaaagctcgacaccca
gacttctcattcggggagctgagtcgtctggtcggcacagagtggaggaatctcgaagct
tctaagaaagcggaatacgaagaacgtgcagccaaaatagtagaccagcaagaacgtgac
aggccgccccagaagcaagcatcccctagagcaggcatgatgggagcttacggcccacct
tacatgcccatgcagggcccccatgagggtttgctgagtgtggccccaatgccacctcac
cccgcagggggtcctcaccttctacctcaccatctccagcaaggtatgcctgggtaccct
ggcatgcctcatcagggtatgatgggcactggtatgaatggcatggcaggaagtccagca
acaggaaactttatgcaacagcctgggatgttcagcccaggacaacatgctcctccacca
tatccaggacagggtcagttgggccagccctcacatttgcagcccaccactccaatgttt
gtggctccaccaccaaagacccagagggtgctccactcagaggcctacctgaagtacatt
gaaggcttacattcagagtccggcaccgtcagcaagtgggaccagactctgaaagctcaa
aggcgagatgctcacctgaccaaagagcaggagagtcggctgccagctcactggctgaag
agcaaaggagcccacaccactatggcggatgcgctgtggcgtctgcgtgacctcatgctt
agagactctctgaacatgtgtcaggctcacaacctgtaa
DBGET
integrated database retrieval system