Mugil cephalus (flathead mullet): 125006785
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Entry
125006785 CDS
T08342
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125006785 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125006785 (smarcd1)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125006785 (smarcd1)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125006785 (smarcd1)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125006785 (smarcd1)
PBAF complex
125006785 (smarcd1)
GBAF(ncBAF) complex
125006785 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125006785
NCBI-ProteinID:
XP_047439118
LinkDB
All DBs
Position
4:11090684..11104571
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AA seq
519 aa
AA seq
DB search
MAARGGFQSAPTAGGGGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPM
PGPGYPRPGMPPSNRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQ
QNRNQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPI
KQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSF
FKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFK
LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE
IPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQE
IAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEE
RRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggttccagtcggcaccgacggctggtggtggtggtggaggcgga
ggagcaatgggacctggacctccggtaccgggcgcaggaccgggcatgggcccggggact
ccgtctgggagaatgggaccttcgtcggccgcgcagaaccacatgtaccgctccccgatg
cccgggccgggctacccgagaccaggcatgcctccatccaaccgtatgaccccacaggga
ccagccatgggccccccagggtacgggggcagccccgtctctcgccccgggatgccgggg
gtgatggatccgtcccgcaaaagaccggcgccccaacagattcagcaggttcagcagcag
cagaaccgcaaccagcacacaaagaaaaagaagatggctgataaaattctacctcagagg
atcagggaactggtcccagagtctcaggcttacatggatctgctggcttttgagaggaag
ctggaccagaccatcatgcgcaagaggctggacattcaggaggccctcaagaggcccatt
aagcaaaagaggaagctgcggatctttatatccaacacctttaaccctgcaaaacctgat
gcagaggatggagaaggaactgttgcatcatgggagcttcgtgttgaggggcgtctgctg
gaagatacggctgtgtccaagtatgaagccaccaaacagaagaggaagttctcttcattc
ttcaagtccctggtgatcgagctggacaaagacctgtacggtccagataatcacctcgtg
gaatggcacaggaccgccaccacccaggagacggacggtttccaggtgaagaggccaggt
gacgtgggagtccgttgcaccgttctgctcatgcttgattatcagccccctcagttcaag
ctggacccacgactggctcgcatgttggggatccacacccagaccagacccgtcatcatt
caggccctgtggcagtacgtcaagacccacaaactccaagacccgcatgagcgcgagttc
atcaactgtgacaaatacctgcagcagatctttgagacccagagaatgaagttttctgag
atcccgcagcgtttgcatgcactcctgatgcctccggagcccatcatcatcaaccacgtg
atcagtgtggaccccaatgaccagaagaagactgcttgctatgacattgatgtggaggtg
gacgacacgctcaagactcagatgaactccttcctgctctccacagcgagtcagcaggaa
atcgctggactggacaacaagatccatgaaaccatcgagaccatcaaccagctgaagacc
cagagggagttcatgctgagtttcgccagagatcctcagggctttatcaacgactggctg
cagtcccagtgcagagacctcaagaccatgacagatgtggtgggaaacccagaagaggag
cgtagagcggagttttactaccagccgtgggctcaggaggcggtctgtcgctacttctac
tccaaggtccagcagaggcggcaggagctggagcaggcgctgggcatcaggaacacctaa
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