Mugil cephalus (flathead mullet): 125007910
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Entry
125007910 CDS
T08342
Symbol
atrX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125007910 (atrX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125007910 (atrX)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125007910 (atrX)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125007910 (atrX)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125007910 (atrX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125007910
NCBI-ProteinID:
XP_047440787
LinkDB
All DBs
Position
5:15388312..15420683
Genome browser
AA seq
2066 aa
AA seq
DB search
MSLASESHLDQMAEKGEEPGSSGETLKHSSSRSKRKPSTVSKHTGQSESGSSAESENESA
TSDNPSDNVSKGTLVMRPAGNENKGAMKLRVDFKQKKTDDTLEKKVSCTACGKQVNQFQR
NSLYEHPALKVLICKSCYNYYKSDDISRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKC
ILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCQRILEKQELVILKQRKTDKTEER
ESKKHKNKAAKEHKAVVNGKEHTEGSGTMSFSYKKLQLPKELIKKAKKLVETTAGLNNTF
IQFIQQAVEDQGDKSIRYRHLKAFKAVLADLKKAHSALEEALEPEFRNMELQNGNEGQHV
VKNSSDAVAPAESAASSAESEEAPEESEEALPENVVASAESEEAPAENVVAPAESEEAPA
GNAAAPVEKGHADNVAESVKESETTQEADVEERNEEDMDTDQVLNDTEMKDNETGTDVPL
KTIKREACEEGLMSAGEMSLDRDIMSVPTSVPEELFQMVESLSDSTMLSQTDGNVAAHTP
AKSNENPTDSQSPQPKVKNLIVKLTPVPVVTTCESRSSRSKNKMKKEETPKKSKEELDED
KSAASDAVDGTESPPPSRRSSRVKTTPLRKQAENTDKNASSESESEDESKDKEKASRVKQ
TTEKQVEEKTLDSDSDEVPHALLEKAAAGQSTDEEQGSSTATAKNSSSKLNASEKTTKKL
SKRKRKSESSDSDQTNKDKKMSKKKKQQQQHQNGSSDSDSDEEKEVKSKAGAAKRRSTRV
KKQKEDKEEDKSSPEKRKRSYEKKRKGRSSKAASKLQSSSSDEDEEEEEEDQQAKGDSGE
DSDEQKIKPLVEDNILGGSGPFHQSSGDEVDTKDEISRVEDDDDDPENRIAKKMLLAQIK
SNYSSGEESSSDNEGEDKEEKPPKKIKKGKEEEEGEQEDDDDDTEDSDGSDVGVKKGGRR
HKLLRHKLSLSEGESGEDKASTKGNKKGGKKKSSRKVGSDDSADSDFEKSESSSESAVSE
EVSESEKDDKRRKTRSSKKKDDEKQRSYKQKKKRRRIKVQDSSSSNEKSGEEGDDDQDGE
GRKGRKKIRKILKDDKLRTETRDALKEEEERRKRIAEREALREKLREVKVIVVEESSAVA
CPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESMKKIEKSSGSGC
ILAHCMGLGKTLQVVAFLHTLLLCDKLDFATALVVCPLNTVLNWLNEFEKWQEGMKDDES
LEVTELATVKRPQERAYVLQRWQESGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVD
PGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLIEYHCMVNFIKENLL
GSVKEFRNRFINPIQNGQCADSTLHDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPK
HEYVLSIRITPLQCKLYRYYLEHFTGVGNATEGGRGRSGTKLFQDFQMLSRIWTHPWCLQ
LDYISKENRGFFDEDSMDEFIASETEESSMSLSSEDEKAKKKKKQGKGKKKRSDDSDSDD
VEVIKEWNTSSRGKNGEGRPRPEPVEEPRPSGSSPGSPSADWHKEFVTEADAEILEHSGK
MVLLFEILRMAEEVEEKVLVFSQSLISLDLIEDFLELACRAKDDEKISPYKGEGKWFRNI
DYYRLDGSTNATTRKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASWNP
SYDVQSIFRVYRFGQIRTVYVYRFLAQGTMEEKIYERQVTKQSLSFRVVDQQQIERHFTM
NELAELYTFEPDMLDDPSEKKSKKATPMLPKDPVLAEMLQNNKDQIVCYHEHDSLLDHKE
EEALSEEDRKAAWAEYEAEKKGLSMRNNYGQPYGQADMGSSSYFSYNVSALASMTNQQLE
DLINQGRQKVIEATNALKAIPRESLEDAIATVWKENPALTETQVQSLALQRQATVELELK
RREAIYRDVLTRQQTLMMFVQKLITNRKVQEQQLAMANQASYLNQLAMQNGMMGGTGLSQ
MDLLGLYQQLHGLQGLSKNPGPSKGL
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttctgaatcacacctagaccaaatggcagaaaagggggaggagcctggt
agctcaggagaaactctgaagcactcctcttcccgcagcaaaaggaagccctccactgta
tctaagcacactggacagagtgaatctggctcttcagccgaaagtgaaaatgaaagcgcc
acttctgacaatccttccgacaacgtatctaaaggtactttagtgatgagaccggctggg
aatgaaaataaaggtgccatgaaactcagagtggatttcaaacagaaaaaaacagatgat
accctggagaagaaagtcagctgcactgcctgtggaaaacaagtaaaccagtttcagcgc
aactctctgtacgagcatcctgcactcaaagttcttatttgcaagtcatgctacaactac
tacaaaagtgatgacatctccagagattctgacggcatggatgaacagtgcaggtggtgt
gctgaaggtggtaagctcatctgctgcgactactgcaacaacgccttctgcaagaagtgc
attctgcgcaacctcggcaggaaggagctgtcagtcataactgatgagaactcaaagtgg
cactgctatgtctgcagatcagagcccctccaggacctggtctccaaatgtcagcgcatc
ttggagaaacaagaactggtgatactgaagcagcgtaaaaccgataaaacagaggaacgc
gagagcaagaagcacaagaacaaagcagccaaagagcacaaagcggttgtcaatggaaaa
gaacacactgaaggctcggggacgatgagtttctcctacaaaaaactgcagttacccaaa
gaacttataaagaaagcaaaaaaacttgttgaaactacagctggcttaaacaacacattc
atccagttcatccaacaggcagtggaggaccagggagataagtctatcaggtatcggcat
ttgaaagccttcaaagctgttctcgctgatttgaaaaaggcccacagtgctttggaggag
gctttggagcccgagttccgaaatatggagttgcagaacggtaatgaaggacagcacgtt
gtaaagaacagctctgatgcggtagctcctgcagaaagcgcagcatcttctgcagaaagc
gaagaggcccctgaagaaagcgaagaggctctcccagaaaacgtagtggcttctgcagaa
agcgaagaggctcctgcagaaaacgtagtggctccagcagaaagcgaagaggctcctgca
ggaaacgcagcggctcctgtagaaaagggccacgcggataatgtggcggagtcggttaaa
gagtcggagactactcaagaagcggacgtggaagagcgtaatgaggaggatatggacact
gatcaagtgttgaatgacactgaaatgaaagacaatgaaacaggaactgacgtgccccta
aagacgattaaaagggaagcctgtgaagagggactaatgtcagctggtgaaatgtcctta
gatcgtgacatcatgtccgtgcctacttcggttcctgaggagctttttcagatggtggag
agtctttcagattccaccatgctctcacagactgacggtaatgtggccgcacatactcct
gcaaagtcaaatgaaaacccaacagactctcagagcccacagcccaaagtgaagaacctc
atagtcaaactgactcccgtgccagttgtgacaacgtgcgagtccaggtcctccaggtcc
aaaaacaagatgaaaaaagaagagacgccgaaaaagagtaaagaggagcttgacgaggac
aaaagtgctgcttcggatgcggtagacggaacggagagtccaccacccagccgtcgctcg
agtagagtgaaaaccactcctttgaggaagcaggctgaaaacacggacaagaacgcctcc
tcggagtcagagtctgaggacgaaagtaaggacaaggagaaagccagccgcgtcaaacag
acaaccgagaagcaggtggaggagaagacactagactctgattcagatgaagttcctcat
gcattgctagagaaagctgcagcaggccaaagcaccgacgaggaacagggcagcagcact
gctactgctaaaaatagttcgtccaagctaaatgcatctgaaaagactacaaagaaattg
tccaaacgcaaaaggaagtctgagagctctgattcagaccagacgaataaagacaagaag
atgtccaagaagaagaagcagcagcagcagcaccagaatggctcctcagactccgactct
gacgaggagaaggaggtgaagagtaaagcgggcgcggcgaagaggaggtctacccgcgtg
aagaaacaaaaagaagacaaagaggaggataaaagctcacccgaaaagaggaagaggtct
tacgaaaagaagcgcaaggggaggagctccaaagcagcctccaagctgcagtcttcctca
agtgatgaggacgaggaggaggaggaggaggaccagcaggctaaaggtgactccggagag
gacagcgatgagcagaagatcaaacccctcgtggaggataacatcctaggaggcagtggg
cccttccaccaatcttccggggatgaagtggacactaaagacgaaatctctcgtgttgag
gacgacgacgacgatcctgaaaacaggattgctaagaaaatgcttcttgcccaaataaaa
tccaactattcttcgggagaagagagctcctctgacaatgagggagaagataaggaagag
aaaccccccaagaaaattaaaaaaggaaaagaggaagaagagggtgagcaagaagacgac
gacgatgacacagaagactcggacggttctgatgtcggtgtgaagaaaggtggcagacgc
cacaagttgcttcgtcacaaactctcgctgagtgagggtgaatcaggagaggataaagct
tccacaaaagggaacaagaaggggggcaagaaaaagtcaagccggaaagtgggcagcgac
gactctgcagactcggactttgaaaagtcagagtccagttcggagtcggcggtaagcgag
gaggtcagtgaatccgaaaaagacgacaagcgccgaaagaccagatcctccaagaagaag
gatgacgagaagcagaggagttataagcagaaaaagaagcgacgtaggatcaaagtacag
gactcctcctccagcaatgagaagagcggagaggaaggcgatgacgaccaagatggagag
gggcgcaagggccgaaaaaagatccgcaaaatcctcaaagacgacaagctgcggacggag
acgagagacgctctgaaagaggaggaggagaggaggaagcgcatagctgagagagaggcg
ctcagggagaaacttcgcgaggtgaaagtgatcgtggtggaggagtcttctgcggttgcc
tgtcccatcaccactaaactggtgctggatgaggacgaagagaccaaggagccgctggtg
caggtgcacaggaacctggtcacaaagctgaagcctcaccaggttgatggggtgcagttt
atgtgggactgctgctgtgagtctatgaaaaagattgagaagtcttcaggctctggttgc
atccttgcccactgtatgggcctgggaaaaactctgcaggtggtggcattccttcacacg
ttgcttctctgtgacaagctcgactttgctacagctctggtggtttgtcccctgaacact
gtcctgaactggctcaacgagtttgagaagtggcaagaaggaatgaaggatgacgagagt
ttagaggtgaccgagcttgccacagtgaagaggccacaggagcgggcgtatgtcctgcag
cgatggcaggagtcgggtggtgttatgattattggctacgagatgtaccgaaatctgaca
caggggaggaacattaagagcaagaagcttaaggagaccttccagaagacactggttgat
ccaggtccagacttggtgatctgcgatgaaggtcatatcctgaagaatgaggcgtccgcg
gtgtccaaagcgatgaattctatcaggacgaggaggaggatcgtgttgactggaacgcct
ctgcagaacaacctcatcgaataccactgcatggtaaacttcattaaggaaaacctgctg
ggttccgtgaaggagtttaggaaccgtttcattaaccccatccagaacggtcagtgcgcc
gactccacgcttcacgacgtcaggatcatgaagaagagggctcacattctctatgagatg
ctggctggttgtgttcagagaaaagattacacagcgctcaccaagttcctgcctcccaaa
cacgagtatgtgctgtcgatcagaatcactcctctgcagtgtaaactttacagatactac
ctggagcacttcacaggtgtggggaatgctacggaggggggccgcggccgctcggggacc
aaactcttccaggatttccagatgctcagcagaatctggacccatccctggtgccttcag
ctggactacatcagtaaagaaaacaggggtttcttcgacgaggacagtatggacgaattc
atcgcttcagaaaccgaagaatcctcaatgagcctgtcctctgaggatgagaaagctaaa
aagaaaaagaagcaaggaaaaggaaaaaagaagagatctgatgactcggacagcgatgat
gtggaggtcatcaaggagtggaacaccagctcccgtggcaagaacggagagggtcgaccc
agaccagagcctgtagaggagcctcggccctctggctcgtcaccaggaagtcccagcgcc
gactggcacaaggagtttgtcacggaggccgacgctgagatcctggagcattcggggaag
atggttcttctctttgagatcctgcgcatggccgaggaagtggaagagaaagtgttggtg
ttcagtcagtctctcatctctctggacctgattgaggatttcctagagttggcttgcaga
gctaaagatgacgagaaaatctctccatataaaggtgaaggcaagtggttcaggaacatt
gactactatcgtctggacggctccaccaacgccaccaccaggaagaagtgggccgaggag
ttcaatgacactagtaacacaagaggtcgtctgtttctcatttcaacacgcgccgggtca
cttggtatcaacctggtggcagccaacagggtgatcatctttgacgcctcctggaacccc
tcctacgacgtgcagagtatcttcagggtttaccgcttcggccaaatcaggaccgtctac
gtctacaggttccttgcacagggtacaatggaggagaagatttatgagcgacaggtgacc
aagcagtctctgtcattccgcgttgtggaccagcagcagatcgagaggcactttactatg
aatgagctggccgagctctacacctttgagccggacatgctggatgatccctcggagaag
aaaagcaagaaagccacgcccatgcttcctaaggatcccgtcctggctgagatgctacag
aacaacaaggaccagatcgtgtgctaccacgagcacgactctctgctggaccacaaggag
gaggaggccttgagcgaagaggatcgaaaggcggcttgggccgagtatgaagcggagaag
aagggtctgtccatgaggaacaactacggtcagccgtacggtcaggcggacatgggctcc
tccagctacttctcgtacaacgtgtcggctttggcctccatgaccaaccagcagctggag
gatctcattaaccagggacgacagaaagtcatcgaagcaacaaatgctctcaaagctata
ccgcgggagtcactggaagatgccatcgccacagtgtggaaggagaacccggcgctcaca
gagactcaggtccagtctctagctctgcagagacaggccaccgtggagctggagctcaaa
cgcagggaggccatctacagggacgtcctgaccaggcagcagacgctcatgatgttcgtg
cagaagctgatcaccaacaggaaggtgcaggagcagcagctggccatggccaaccaggcc
agctacctgaaccagctggccatgcagaacggcatgatgggaggaactgggctcagccag
atggacctgctcgggctctaccagcagctccacggcctccaaggcctgagcaagaacccc
ggaccctccaagggcctgtag
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integrated database retrieval system
