Mugil cephalus (flathead mullet): 125007961
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Entry
125007961 CDS
T08342
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125007961
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125007961
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_11
TPR_16
HrpB1_HrpK
TPR_MalT
HAT
Motif
Other DBs
NCBI-GeneID:
125007961
NCBI-ProteinID:
XP_047440875
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All DBs
Position
5:9999220..10006618
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AA seq
733 aa
AA seq
DB search
MAAEGCEEMSGNGELGESPDMEASEVPAPPPMEMAEVSEENGGTATAPDAPVDPDPTSFP
MPPAAEDEEGEMPADFERLWKVAHDNPQDFTSWTDLLQYCEQESHVTASRRSLEAFLVRY
PLCYGYWKKFADLERRAGFNDKAEEVCIQGLQAIPLSVDLWIHYINLLLGTLNMNLPESP
QKIRSVFENAIAAAGLDFHSDRLWDLYVEWEKEQGNMKNATAVLDRALTVPTQLYNTHYD
KFKEHLNNHEPKEVLSPEEYEELRTLCRQSQKAERAEQAQEKDEERPPGEEEPATPEGTD
SEELMQKIREQVLARRDKVYQDNEGEVRKRWNFEDAIKRPYFHVKPLDRIQLRAWHSYLD
WEVAQLHSNAADATQSEYAQEPNQATTEESEVTSQPRVESEDAAAVARDDHRVRILFERC
LIACALYEEFWIRYVQYLEPQSVDEARAVYRRACEIHLAYKPNIHMQWATFEERHGDLTE
ARRVLEALEKIVPGLVVVRLRRAALERRAGQLEQSEALLREAVAESKEKPTLHAFYSIKL
ARLLLKLSRNPSRARSVLQEALEISPDNDKLHLNLLELEVSGDPWASAEAVQECVTRALA
APLAPHTKILLSQRGLQFTEDYSDSIQSVLSVYEGHQKLLKELGGTKRGAENGDEDSEKL
SKSEDGSAVAASAQVPPTMPHVPITTPPPPMMGADMSTQAGYGAYSSWYQQPQYGSYGYQ
NTWNYNQGYYPPS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagggctgtgaggagatgagcggcaacggggagctcggagagtctccagac
atggaagcttctgaggtccctgcgccgcctccgatggagatggccgaggtgtcagaagag
aacggcggtacagccacggcccccgacgctcccgtagaccctgaccctacgtccttcccc
atgcccccggctgcagaggatgaggagggggagatgcccgcggactttgagcgtctgtgg
aaggtcgctcatgataatccccaagatttcaccagctggacagatctgctgcaatactgc
gaacaagagagtcacgtcacagcttcacgcagatcgttagaggccttcctcgttcgctac
ccgctctgctacggctactggaagaagtttgcggacctggagcgtcgtgcgggttttaac
gacaaagcagaggaggtttgtatccagggtcttcaggctatccctctgagtgtagatctg
tggatccactacatcaatctgctgctggggacactgaacatgaacctgcctgagtcaccg
cagaagattcgcagcgtgtttgagaatgcgattgcggcagcagggctggacttccactca
gaccggctatgggatctgtatgttgagtgggagaaggagcaggggaacatgaagaacgca
acagccgtcctggacagagccctcacagtccccacccagctctacaacacccactacgac
aagttcaaagaacacctgaacaaccatgagcctaaggaggtgctgtccccggaggagtat
gaggagctgaggacgttgtgccgtcagagccagaaggcagagcgcgctgaacaggcgcag
gagaaggacgaggagaggccgccgggcgaggaagagcccgccacaccggagggcacagac
tcagaggagctgatgcagaagattagggagcaagtgttggctcgaagggacaaagtttac
caggacaacgagggagaagtccggaagagatggaacttcgaagacgctatcaagcggccg
tacttccacgtcaagcccctcgaccgcatccagctccgcgcctggcactcgtacctggac
tgggaggtcgctcagctccacagcaacgccgcggacgccacccaaagtgaatacgcgcaa
gaaccgaaccaggcgaccacagaagagtcagaggtcacgtcccagccccgcgtggagtcg
gaggacgctgctgccgttgcccgtgacgaccacagagttcgcatcctctttgagcgctgc
ttgatcgcctgtgcgctgtatgaggagttctggatcaggtacgttcagtacttggagccg
cagagcgtggacgaggcccgagccgtttacagacgagcctgcgagattcacctggcttac
aaacccaacatccacatgcagtgggccacgttcgaggaaaggcacggtgacctaacggag
gctcggcgagtgctggaggccctggagaagatcgtgccgggtttggtggtcgtgcgtctc
cgcagggccgctctggagaggcgagcgggccagctggagcagtcggaggccctgctgagg
gaggcggtggccgagtccaaagagaaacccacgttacacgctttctactccatcaagctg
gcgcgcctgctcctgaaactgagcaggaaccccagcagggcccgcagtgttttacaggag
gccctggagatcagtccggataacgacaaactgcacttgaaccttttggagctggaggtg
tcgggggacccctgggcctcggctgaggcggtgcaggagtgtgtgacgcgagccctggca
gcgccgctcgcccctcacaccaagatcctcctctcacagcgaggcctgcagttcacagag
gactacagcgactccatccagagtgtgctgtctgtctatgagggacaccagaagctgctg
aaggagctgggaggaacaaagaggggagcagagaacggggatgaggattcagagaagctg
agcaaaagtgaagacggctcggctgtcgctgcgtccgcgcaagtcccccccacgatgccg
cacgtccccatcaccacgccgccgccccccatgatgggcgccgacatgagcacacaggcc
ggctatggagcgtacagcagctggtaccagcaaccgcaatacggcagctacggctaccag
aacacctggaactacaaccagggctactatccacccagctaa
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