Mugil cephalus (flathead mullet): 125007975
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Entry
125007975 CDS
T08342
Symbol
col23a1a
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
125007975 (col23a1a)
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125007975 (col23a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125007975
NCBI-ProteinID:
XP_047440910
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All DBs
Position
5:14629506..14745639
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AA seq
627 aa
AA seq
DB search
MDTARDSSGESKPVCQCAPKSAVQRWLPGFPIFLCSLMCVSSITVCLLMSFKTYQLENRL
QKEMDKATVFQPPHMAFLNEDGTLISELSTPIGQLVEEKVVALMPKLRTARDVGQECSCP
PGPPGKRGRMGRRGDPGPPGKAGRDGYPGPLGMDGKPGLPGLKGSQGPAGPKGEKGDQGD
TGPRMVFPRYDHSFISGDQSSSFQRRLLKGDQGQAGPAGPPGPPGPPGPRGPPGNTGKDG
PRGPAGEPGFPGRDGSEGPQGLPGKPGEDGEPGYPGTQGPPGTKGEPGFGQKGERGSDGL
PGYKGDKGEAGEQGPQGPAGYPGEKGVPGSSDILDINGKLLDALQAIKTISVSGPPGPPG
PPGLPGEKGELGLPGPAGIDGEKGPKGDLGEAGPPGARGEKGEMGLSGPAGMDGQKGEKG
DCRLDDNLIQMISQPGPPGPPGPQGVPGSPGSMGLHGMPGPKGEPGLGMKGEKGDAGSPG
LRGSDGHQGPPGSAGLVGLPGAKGEKGRMGEAGLDGFPGLRGEKGDRGERGDKGDRGLPG
KKGLKGNKGEQGPPGLDQPCPVGCDESKGLSVKAGLPTPQTPPLPPSGPEAPCPVGHDGL
PIPGCWHKGHFEEMARQKLKRKRLSQP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatacagccagagactccagtggagaaagtaaaccggtgtgtcagtgtgcccccaag
tccgcggtccagcgatggctgccagggtttcccatctttctgtgctcgctgatgtgcgtg
agctccatcaccgtgtgtctgctgatgagcttcaagacgtaccagctggagaaccgactg
cagaaggagatggacaaagcgaccgtcttccagcccccgcacatggctttcctaaacgag
gacgggacccttatctcagagctgagcaccccgatagggcagctcgtggaagagaaagtg
gtggctctgatgcccaagctgcggacagcgcgagacgttggccaggagtgctcctgtcct
ccaggacctccaggaaaacgtggacgcatgggaagaagaggggatcctgggcctcctggc
aaggctggacgggatggatacccgggtccgctcggcatggatggaaaaccgggtttacca
ggtctcaagggaagccagggaccagccggacccaaaggagaaaagggtgaccaaggagac
actgggccaaggatggtctttcctaggtatgaccatagctttatctccggagatcagtcc
agcagctttcagagacgcttactgaagggtgatcaaggccaagctggacccgctggtcct
cccggtcccccaggtccccctggtccccgtggcccccctgggaacactggcaaggatggt
cctcgtggtcctgctggagagccaggttttccaggtcgtgatggctctgaggggccacaa
ggattaccagggaagccgggagaggacggtgagcccggctatccaggaacacagggtcct
ccggggacgaagggtgagccgggttttggacaaaaaggagaaagaggctcagatggactt
ccaggctacaagggtgacaaaggagaagcaggagagcaaggaccacagggacccgcgggt
tatcctggtgagaaaggtgtcccgggctcctcagacatccttgacatcaatgggaagctt
ctagatgctctccaggccatcaaaaccatcagcgtctcgggcccacctggtccacccgga
ccccctggacttccaggagagaagggtgagcttggtttacctgggccagcaggaattgat
ggggaaaagggacccaaaggtgacttgggtgaagctggacctcctggtgctagaggagag
aaaggcgagatgggtctctctgggccagctggtatggatggacagaagggagaaaaaggc
gactgcaggctggacgacaacctgattcagatgatttcccagccaggcccaccaggccca
cctggcccacaaggagtacctgggtctcctggttcgatggggctgcacgggatgcctggt
cctaagggcgagccgggactcgggatgaagggagagaagggggacgctggttctccagga
ctcagagggtcagacggccaccagggtccgcctgggtctgcagggttggtgggtcttcca
ggtgccaagggagaaaagggcagaatgggtgaggccggactagatggtttcccaggactg
agaggagaaaaaggtgacagaggggaaagaggagataagggtgacagaggattaccaggg
aagaaaggtctaaagggcaacaagggagaacaaggtcctccaggtctggaccagccttgt
cctgtgggttgtgatgagtctaaaggcctgtctgtgaaggcagggcttcctacccctcaa
actcctcctcttcctccttcgggccctgaggccccctgtcctgtgggccatgatgggcta
cctataccaggttgctggcacaaggggcattttgaggaaatggcgaggcagaagctcaag
cgcaagcgcctctctcagccctga
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