Mugil cephalus (flathead mullet): 125008146
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Entry
125008146 CDS
T08342
Symbol
dcpS
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125008146 (dcpS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125008146 (dcpS)
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
125008146 (dcpS)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
125008146 (dcpS)
3'-5' decay
Other 3'-5' decay factors
125008146 (dcpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
125008146
NCBI-ProteinID:
XP_047441196
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All DBs
Position
5:complement(20778937..20781770)
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AA seq
330 aa
AA seq
DB search
MADNTAKRELDAAGSDELSPEVKRAKTEDENGGENGKEAECENVLSGFKTSSVLRDSARE
KNIFIHGKVADQDAVVILEKTPIREDTLTELFTHSTLKLVMKNDIYSTYQLQPPPRFNEI
KTTVVCPATEKHVKKYQCQESYLMEETGDDYQSITLPYIQKQGFSVQWVYNILEKKAETE
RIVYEDPDPEVGFVLLPDFKWDQKQVDDLYLIAITHRRDIKSLRDLTSEHLPLLQNMFQK
GKEIILQRYNLPASKLRVYLHYQPSYYHLHVHFTKLGYEAPGCGVERAHLLADVIQNLQS
DPQYYKTRTLYFPLRADDGLLSMFKEAGKL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatacagctaaacgtgaattagatgctgctggatctgatgaattatctccg
gaggtgaagagggcgaagaccgaggatgagaatggcggagaaaacgggaaagaggcggaa
tgtgaaaatgttctgtctgggtttaaaacctctagcgtcttgagagattctgcccgggag
aaaaacatatttatccacggaaaggttgctgatcaggacgctgtggttatcctggagaag
actcccatcagagaggacaccctgaccgagctgttcactcactccactctcaagctggtg
atgaaaaacgacatctacagcacctatcagctccagcctcctccacgcttcaatgagatt
aagaccacagtggtgtgtccggccacagagaaacatgtaaagaaataccagtgtcaggag
tcttacctgatggaggagaccggggacgactaccagtccatcactcttccctatatccag
aagcagggtttcagcgtgcagtgggtttacaacatcctggagaagaaggcagagactgag
aggatagtttatgaagatccagaccctgaggttggctttgtcctcctccccgatttcaaa
tgggaccaaaaacaggtagatgatttatatctaattgctataacacatcggcgagacatt
aagagtcttagagacctgacgtcggagcacctcccgctgctgcagaacatgttccagaaa
ggaaaggagatcatcctgcagcgctacaaccttccagccagtaagctgagagtctacctg
cactaccaaccgtcctactaccacctgcacgtccacttcaccaagctaggctacgaggct
ccgggctgcggcgtggagcgcgcccacctcctggcggacgtcatccagaacctgcagtct
gacccccagtactacaaaacccggacgctgtactttcccctgagggcagacgacggactg
ctgagcatgttcaaggaggcaggaaagctgtaa
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