Mugil cephalus (flathead mullet): 125008406
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Entry
125008406 CDS
T08342
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125008406 (pcdh18b)
Cell adhesion molecules [BR:
mcep04515
]
Cadherins
Protocadherins
125008406 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
PAG
TMEM154
ECSCR
DNER_C
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125008406
NCBI-ProteinID:
XP_047441577
EnsemblRapid:
ENSMGCG00000000968
LinkDB
All DBs
Position
5:1730350..1738895
Genome browser
AA seq
1242 aa
AA seq
DB search
MGAKLVQTKGNIFFSALLQLLLFVALIHGTTGKTLKYKVYEEQKVGTVIARLKEDVAGIL
SKLPSSLTFRFRAMQRGSTSFLTVREEDGEIAIATKIDREKLCEKNSNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGTRVPLDGAVDADVGENSLHTYS
LTPNNFFKIDVRTRTDGAKYAELVVMRDLDREVQSSYQFQLTASDNGVPPKSGSTLLKIS
ISDSNDNSPAFDEQAYIISLMENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKINPENGHITLIKKVDYESTASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISECAPVDTFIALVRVDDSDTGLNGEVVCRLHGHGHFRLQKTYEKNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSRYEVFKS
ENNSPGAYLMTVVALDPDLGTNGQVTYTIIDALVQGSHISTYVTIDPSSGAVYALRSFDH
EDVSRIGFTVQAFDAGKPALSANATVLLTVLDENDNPPIIHSPSLRNHTAELRVWKYASP
GQLITALKVTDRDAGANGEVSCAIVGGNENGLFVMDARRCELRTNASLEQATRDVMEIRV
EVQDRGTSRLATGALLRLSLQENMDIFPPLYPTGSSQALPDLSLIVIIISLCAVCVLLLI
VMVMFAIARCNREKKDPRHNYNCRVAESSYQNHPKKPSRQIHKADITLVPTVNGTLPVRS
HPRSPSPSPTPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHTTPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMD
RLLGEGFTEIYAPDGQHRPHAAMRLCTEECRVLGHSDQCWMPPLASPASSSSDYRSNLYI
PGEEAHQATDLSQETTPQPCTDAGQSRNQSFSTFGKDLGGEDGGEEEGGEGESNKARDED
LCGTTSLLSEMSSVFQRLLPQGLDSYVQVNENQKGTSLSGVGVPMSGSLDRRRGHLPGKP
SPSVHQQGVAAWAANTHFQNPGSNIGPSGHHQGGSYHTLKPSTKLSSQSSNHKVSQAPKI
CPQNSGHIPKPHNSPLLTALVSPTLVQPSTTPVPVPVPVPLPGPSSKWLPAMEEIPENYE
EDDFDSVLSHLQGKRSDSRHELVDASELVAEINKLLQDVRQS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaaactggtgcaaaccaaaggaaatatattcttctcggcattacttcaacta
ttgcttttcgtcgcgcttatacacggcaccaccggtaagactctgaaatataaagtttac
gaggaacagaaagtaggtacagttattgcacgtttaaaggaagatgtagctgggatttta
tctaaactaccgagttccttgacctttcggttccgcgccatgcagcggggtagtacttcg
ttcttgactgtccgggaggaagacggagagatcgcaattgcaaccaaaatcgaccgcgag
aagctgtgtgagaaaaactccaactgctctattgaattcgacgtggttacgctcccgaca
gagtacctgcagctattccatgtggaggtagaagtgttggacattaacgacaactccccg
cacttctcccgcgccatcgtccccattgagatttccgagagcgcatccgttggcacccgc
gtaccgctggacggcgccgtggatgcagacgtcggggagaactccttgcatacctactct
ctgacgcccaataacttctttaagatcgatgtgaggaccaggactgacggtgccaagtat
gcagagttggtagtgatgagagatttggaccgggaggtgcagtccagctaccagtttcag
ctcacggcctcggataatggggtgcccccgaagtctggctccactttgctcaagataagt
atttctgattccaacgacaacagcccagcttttgacgagcaggcttatataatcagtttg
atggagaactctccccttgggactctaatcattgatttaaatgccacagatccagacgag
ggtactaatgggaaaatagtctactctttcagcagtcatgtctcgccaaagatcttggaa
acatttaagataaacccagaaaatggccacattactctaattaaaaaagtcgactatgaa
agcactgcctcttatgaattggatgttcaggcacaggacctggggcctaattccattcct
ggactttgcaaaattgtggtgaaagtggtggatgtgaatgacaacaaaccagagataaac
atcaacctgatgacgcctggtaaagaggaggtggcctacatttcagaatgtgcccctgtg
gacacattcatagctctggtgcgtgttgatgatagcgatacagggctcaacggggaggtg
gtgtgcagactgcatggtcacggccacttcaggctccagaaaacatacgagaagaattac
atgatcctcaccaatgtctcgctggacagggagaaaagatcagagtacagtctgacagtg
atagctgaagacaggggttcaccaagcctctccactatcaaacattttactgtccaggta
ttagatgaaaatgacaatcctccaaggtttgagaagagccgctatgaggtatttaaatct
gagaacaactctcctggagcatacctgatgactgtggtggccttagatccagatctgggg
accaatggccaggtcacctacaccatcatcgatgctctggtccaagggagccacatctcc
acctatgtcaccattgacccttctagtggtgcagtctatgctttacgcagctttgaccac
gaagatgtcagccggattggattcacggttcaggcatttgatgcggggaagcctgcactg
tcagccaatgccactgtcctgctcacagttttggatgaaaatgacaacccacccatcatc
cactcaccatccctacggaatcacactgctgagctccgggtttggaaatacgcatctccg
ggtcagctcatcactgcccttaaagtcacagaccgagatgccggtgccaatggagaggtg
agctgtgccattgttggtggcaatgagaatgggctctttgtaatggatgctcgaaggtgc
gagctgagaaccaatgcaagtctggaacaggctacacgggatgtgatggagatcagagtg
gaagtgcaagacagaggcactagccggctggccacaggagccctcctcaggctctctctg
caggaaaacatggacatcttccctcctctgtaccctactggctccagtcaggccttgccg
gatctctcccttattgtcatcatcatctctctgtgcgctgtgtgtgttctgctgctcatt
gtcatggtgatgttcgccattgcccgttgcaaccgtgaaaagaaagaccccagacacaac
tataactgccgtgtggcagaaagcagttaccagaaccaccccaagaagccttccaggcag
atccacaaggcagacatcactctggtcccaactgtcaatggaactttacctgttcggtca
cacccacgctccccttcaccctcccctactcctgagagaggtactctggggagcaggcag
agccatcatagccgccagtcactcaatagcctggtcactatctcttccaatcatgtgcca
gagaactttgccctggagcttgcccacaccacacctgctgtggagcaagtttcacagctt
ctgtccatgctccatcagggccagtaccagccacggccaagcttcagaggcaacaaatac
accaggagctacagatatgccctgaatgagatggataagttcagtctgaaggacagcggt
cgtggagacagcgaggctggggacagtgactacgagcctggaagggagtcacccatggat
aggctccttggtgagggctttactgagatatatgctcctgatggccagcacagaccgcat
gcagctatgaggctctgcacagaggaatgtcgtgtcctgggtcactcggatcagtgctgg
atgcctcccctggcctctccagcctcatcttcctctgactaccgtagcaacctgtacatt
cctggggaagaagctcaccaagccactgacctctctcaagaaacaaccccgcagccttgc
actgatgccggccagtcccggaaccagagcttttcaacttttggcaaggacctgggtggt
gaagatggtggagaagaagagggtggagagggtgaaagcaacaaggcgagagatgaagac
ctctgtgggaccacatcattgctgtcagagatgagcagtgtgtttcagaggttgctacca
cagggtctggactcttatgtccaggtcaatgagaaccagaaagggactagcctaagtggg
gtgggtgtgccaatgtctggatctttagatcgcagaaggggtcatctgcctggcaagccc
agcccctccgtccaccagcagggtgtggcagcctgggctgccaatacccacttccaaaac
ccaggcagcaacattggcccatctggccaccaccaaggcggcagctaccacaccttgaaa
cccagcactaagctcagctcccagagcagcaaccacaaggtctcacaggcacccaaaatc
tgtccccagaacagtggccacatccccaaaccccataatagtccactactcacagcactg
gtcagccccacactggtgcagccctccacaaccccagtgccagttcctgtgccagtgcca
ctacctggaccctcctccaagtggctaccagctatggaggagatcccagagaactatgag
gaggacgattttgactctgtgctgagccaccttcagggcaagcgcagtgacagccgtcat
gagctggtggacgctagtgagttggtagctgagatcaacaaactgttacaggatgtccgg
caaagctag
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