Mugil cephalus (flathead mullet): 125008411
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Entry
125008411 CDS
T08342
Symbol
harS
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125008411 (harS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcep01007
]
125008411 (harS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125008411 (harS)
Enzymes [BR:
mcep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
125008411 (harS)
Amino acid related enzymes [BR:
mcep01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125008411 (harS)
Transfer RNA biogenesis [BR:
mcep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125008411 (harS)
Prokaryotic type
125008411 (harS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
XH
Motif
Other DBs
NCBI-GeneID:
125008411
NCBI-ProteinID:
XP_047441587
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All DBs
Position
5:complement(1266025..1277633)
Genome browser
AA seq
519 aa
AA seq
DB search
MNILGMFCVRSWPGLVGFRSCVRSLHAFPGITVTQIDEEVAKLLELKAQLGDDGKQQFVL
KTAKGTRDYNPKQMAIREKVFNTIISCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYD
LKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDF
DIAGQYDAMIPDAECLKIVHEILSELGLGDFRIKVNDRRILDGMFAVCGVPDDKFRTICS
TVDKLDKMPWEEVKKEMVNEKGLSEEAADQIGEYVSMQGGMDLAERLLQDHKMSQSKQAC
AGLTDIKMLFSYLQIFQVTDKVVFDLSLARGLDYYTGIIYEAVLTQAGVAAVSNEAQNGA
NAEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAEKIRT
TEVQVMVASAQKNLLEERLRLVTELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLVAIL
GEQELKDEVVKLRVVATREEVDISRADLIQEIMKRTSKA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacatactgggcatgttttgtgttcgttcctggcctggtcttgtgggctttcgatca
tgtgtccgatccttgcacgctttccctgggatcactgtgactcagattgatgaagaggta
gccaaactgctggagttgaaggctcagttaggagatgatggcaaacagcaatttgtcctc
aaaacagcaaagggaacaagagactacaaccctaagcagatggccatcagggagaaagtc
ttcaacaccatcatcagctgctttaaacgccatggagcagagaccattgacacacccgtt
tttgaactgaaggaaacattaacaggaaaatacggagaggattccaagctcatctatgac
ctgaaagaccagggtggagagctgctgtccctcagatatgacctcactgtgccttttgcc
cgctacctggctatgaacaagataaccaacattaagcgctaccacattgctaaggtctat
cgccgtgacaacccagcaatgacccgtggaagatacagagaattttaccaatgtgatttt
gacatagcagggcagtatgatgccatgatcccagatgctgagtgtctgaagattgtacac
gaaatcctcagtgagttgggccttggagacttccgtattaaggtcaacgacagacggatc
ctggatgggatgtttgccgtgtgtggtgttccagatgacaagttccgcaccatctgctca
acagtagataaactggacaagatgccctgggaagaggtgaaaaaggagatggtgaatgag
aagggtctgtcagaggaggctgccgaccaaattggggagtacgtcagcatgcagggtgga
atggacctagctgaacgcctccttcaagaccacaagatgtctcagagtaagcaagcctgt
gccggcctgacagacatcaagatgctcttcagttacctgcagatcttccaggtcacagac
aaggtggtgtttgacctcagtctggcccggggtctggactactacacaggaatcatctat
gaggcagtgctgactcaggcaggcgtggccgccgtctctaatgaagcccaaaatggcgca
aacgcagaagagagtgttagtgtaggcagcgtcgctggagggggacgatacgacggcctg
gtgggcatgtttgacccaaagggtaggaaagtcccatgtgtgggtgtcagcattggcatt
gagaggattttttccatcatggagcagaaggctgaggcctcagctgagaagattcgtacg
acagaggtacaggtcatggtggcgtctgctcagaagaaccttctggaagagagactcaga
ctcgtcactgagctctggaatgctggcattaaggcagaggtgatgtacaagaagaacccc
aaactgctgagtcagctgcaacactgtgaggaatcagggatccccttggtggccatactg
ggagaacaggagctaaaagatgaagtggtcaaactccgtgtggtggctaccagagaggag
gttgacatttccagagctgatctcatccaggaaataatgaagaggacttctaaggcgtag
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