Mugil cephalus (flathead mullet): 125008412
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Entry
125008412 CDS
T08342
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03083
Polycomb repressive complex
mcep04980
Cobalamin transport and metabolism
mcep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125008412 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125008412 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125008412 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125008412 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125008412 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
mcep03029
]
125008412 (hcfc1b)
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125008412 (hcfc1b)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125008412 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
125008412 (hcfc1b)
MLL-HCF complex
125008412 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125008412 (hcfc1b)
Mitochondrial biogenesis [BR:
mcep03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125008412 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
125008412
NCBI-ProteinID:
XP_047441593
EnsemblRapid:
ENSMGCG00000025747
LinkDB
All DBs
Position
1:27208309..27222329
Genome browser
AA seq
1394 aa
AA seq
DB search
MASEPATPAVLRPRWKRVVGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT
ATNQWFVPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLK
AKPPKNGPAPCPRLGHSFSLIGGQCFLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPATSGPAPPPRESHTAVVASGRGPNRLIIYGGMSGCRLGDLWVLDIETLVWSKPV
LGGTAPLPRSLHSATTVKNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMCW
ETVLMDTVEDNVPRARAGHCSVSINSRLFMWSGRDGYRKAWNNQVCCKDLWYLETECPCA
PSRVQLVRANTSSLEVSWGPSQTADTYLLQLQRYDVPSTPAASSPSSSAAPIPAVPVATA
PAIQSASLPGITLLPSPTAPGPGSPLAVRAPAVLKAAAAAPGAVGGASIVTVRQTTPKSQ
PIGSSPQMSGMAALAAAAAATQKIPPSTASPVTKVSNATTRMLKTAVAQVGGASLVSSPA
GTPGRPIITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLGMGRGGALIGNLGNLGN
LGKVMSVVQAKPVQAGNSPVTQILQTKASLPAGTILKLVSSADGKQTTILTSSQAGSNKP
TILGVAPATSKPGATIIKTIPMSALQGGAGGNSPITILTTKMVTSGTTGKLLTAVPKIST
GGQQGVTQVVLKGATGAPGTILRTVPVGGVRLVSPGAAGTTLVVKATTGVSTLGTGTGTV
STLARQITTATAATGPKQQVTLITTPSGAEAQDLVQDLVQDLPVSIMASPTSEEPGSTTT
TTSTSTAEGGGHSAAVTLVCSNPPCETHETGTTNTSTVSSAGMNQDLQVSSGPPICSNPP
CETHETGTTNTSTMAGAGGVHQVCSNPPCETHETGTTNTATTATAQQGGDSDSTDPASSS
DPTSSTTANQSRAITTVTQATPTPGPSIPEITSLVGADRAESSEAVAMVTSESQAEGVMS
SAQMASSEDGLPQELMSSEGDGALDQLAVTTATEEAARQSGESSMDRSIPIVLTQQEQQF
QDVHNQPEPEPEPQTSSIPTEGLAPADSLNDPAAETNEHELTSSAVTSAVARLASTFGPA
PVLKSRAAAAPPEASNGITATATAVHVKPPAKENQWFDVGIVKVTNVVVTHYYIPYDDKM
ADDDSGTVPDYSQMRRVELQPGTAYKFRVAGINICGRGSFSEVSAFKTCLPGFPGAPCAI
KISKTVGGAQLTWEPPAVTSGPITEYSVYLAIRSSQASSSSSGSGPAQLAFMRVYCGTGA
SCLVQASSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQETSKDAKPAKRPGASP
DLKPAGPKKFRTDQ
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggaacccgccacccccgcggtgctccggccccgatggaagcgcgtcgtgggt
tggaccggcccggtgccgcggccccggcacggacaccgagccgtggccatcaaggagcta
atggtggtgttcggtggagggaacgaggggatcgtggacgagctgcacgtctacaacacg
gccactaatcagtggttcgtcccggcggtccgaggagacgtcccgcccggctgtgccgcc
tacggcttcgtgtgcgacgggacgaggctgctggtgttcggagggatggtggagtacggc
aaatacagcaacgacctgtacgagctgcaggccagtcgctgggagtggaagcgactgaag
gctaaacctccaaaaaacggccccgccccctgcccccgcctcggacacagcttctctctg
attggcggccagtgcttcctgttcggaggactggccaatgacagcgaagaccccaagaac
aacatccccaggtacctgaacgacctgtactgtttggagctgcgacccggctccagcgtg
gtcggctgggagatcccagcgacgtccgggccggcgccgccacccagagagagccacacg
gcggtggtggcgagtgggcgtggccccaaccggctcatcatctacggggggatgagcggc
tgcagactgggagacctctgggtcctcgacatcgagactctggtgtggagtaaacctgtc
ctcggtggaacggcccccctccctcgaagcctgcactcagccaccaccgtcaaaaacaag
atgtatgtctttggaggttgggttcctctggtgatggacgacgtcaaagtggcgactcat
gagaaggagtggaaatgtaccaacacactggcctgcctcaacctggactcgatgtgctgg
gagacggtgctgatggacacggtggaggacaacgtccccagagctcgagcgggtcactgc
agcgtcagcatcaactccagactcttcatgtggagcggcagggacggatacaggaaggcc
tggaacaaccaggtctgctgcaaggacctctggtacctggagacagagtgtccctgtgcc
ccgtcccgggtgcagctggtccgggccaacacctcgtccctggaggtgagctggggcccg
tcccagaccgcggacacgtacctgctgcagctccagagatacgacgtcccctccacacct
gcagcctcctccccctcctccagcgccgcccccatccccgccgtcccggtcgccacggcg
ccagccatccagagcgcctcgctgcctggcatcactctgctcccctcacccaccgccccc
ggtcctggaagcccattggccgtcagagctccagcggtcctgaaggcggcggcggcggct
ccgggtgcagtgggcggagcctccatcgtcacagtgaggcagaccacgcccaaatcccag
ccaatcggcagcagccctcagatgagtggcatggcggcgctggcagcggcggcggcagcg
actcagaagatccccccgtccacagcgtccccagttaccaaggtgagcaacgccaccact
cggatgttgaagacagcggtggctcaggtgggcggggcttctctggtctcctcccccgcc
gggactcctggccgaccaatcatcacggtccataagtcgggcacggtgacagtgtctcag
caggcacaggtggtcaccacggtggtgggcggagtcacaaagaccatcactctggtcaac
agtcccctgggcatgggaaggggcggggctctgattggtaaccttggtaaccttggtaac
ctggggaaggtgatgtcggtggtccaggccaaaccggtccaggctggaaacagcccagtc
acacagatcctccagacgaaggcttccctcccagcagggaccatccttaaactcgtatct
tcagctgatggtaaacagacgaccatcttgacttcatctcaggccggatccaacaaaccc
accatcctgggcgtcgccccggcaacctccaaacccggagccaccatcatcaagaccatc
ccgatgtcggccctgcaggggggagcaggtgggaatagtccgatcaccatcctgaccacc
aagatggtgacttcagggaccacaggaaaactcctcactgctgtccctaagatatctaca
ggaggccagcagggggtcacacaggtggtgctgaaaggagctacaggtgcgccaggtacg
atcctcaggaccgtcccagtgggcggagtcaggctggtgtcaccaggagctgctggaacc
acgctggttgtcaaggcaaccacaggtgtctccaccctggggacggggacagggaccgtc
tccaccctggcccgccagatcaccacggcaaccgctgccactggacccaagcagcaggtg
actctgatcacgacaccgagcggcgccgaggctcaggatctggtccaggacctggtccag
gacctgcccgtctccatcatggcctcccctacatcagaggaaccaggcagtactactact
accactagtactagtactgcagagggaggaggacactctgctgcagtgacgctggtctgc
tccaaccccccatgtgaaacccatgagaccggaaccaccaacacctccacagtgtcctca
gccggcatgaaccaggacctgcaggtgagttcaggtccccccatctgctccaacccccca
tgtgaaacccacgagaccgggaccaccaacacctccaccatggctggagccggaggcgtc
caccaggtgtgttcgaaccctccatgtgagacccacgagaccgggaccaccaacaccgcc
accacggctacagctcagcagggcggagactcagactccacagaccccgcctcctcctcc
gaccccacctcctccaccacagccaatcagagcagagctatcaccactgttacacaggcc
acgcccacacctggaccatccatacctgagatcacctcattggtcggagccgatagggcg
gagtcctcagaggccgtcgccatggtgacgtcagagagtcaagcagagggtgtgatgtca
tcagcacagatggcgtcctcagaggacggtcttccccaggagctgatgtcatcagaaggg
gacggagccttggatcagttggctgttactacagcaacagaggaggcagcgagacagagt
ggcgagtcctcgatggaccggtccattcccatcgtcctgacgcagcaggagcagcagttt
caggacgtccacaaccaaccagaaccagaaccagaaccccagaccagcagcatccccaca
gagggccttgctccggccgacagcctcaacgacccggcagcagagaccaacgagcacgag
ctgacatcatcggcggtgacgagcgctgttgcccgattggccagcacgtttggccccgcc
cccgttctgaagagtcgagcagctgcagcgccaccggaggcgagcaacggaattaccgca
acggcaacggctgtccacgtgaagccgccagcgaaggagaatcagtggttcgatgtcggc
atcgtcaaagtcaccaatgtggtggtcacgcattactacatcccctacgacgacaagatg
gccgacgacgactcgggtacggtgcccgactacagtcagatgaggagggtggagcttcag
ccggggacggcgtacaagttccgcgtggccgggatcaacatctgcggccgcgggtccttc
tctgaagtctctgcgtttaaaacgtgtctgcccgggttccctggagctccgtgcgccatc
aagatcagcaagacggtgggcggggcccagctgacctgggagcctcctgccgtcacgtcg
ggaccgatcaccgagtactcggtctacctggccatccggtccagccaggcctcctcctcc
tcctccgggtccggcccggcccagctggccttcatgagggtgtactgcggtaccggcgca
tcctgcctggtccaggcctccagtttggccaacgcccacatcgactacaccaccaagccc
gccatcatcttccgcatcgcggcccgtaaccagaagggctacgggccggccacgcaggtc
cgctggctgcaagaaaccagtaaagacgccaaaccagccaagagaccaggagcctctcca
gacctgaaacctgccggaccaaaaaagttcagaaccgaccaatag
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