KEGG   Mugil cephalus (flathead mullet): 125008412
Entry
125008412         CDS       T08342                                 
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
  KO
K14966  host cell factor 1
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03083  Polycomb repressive complex
mcep04980  Cobalamin transport and metabolism
mcep05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    125008412 (hcfc1b)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    125008412 (hcfc1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125008412 (hcfc1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mcep01009]
    125008412 (hcfc1b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcep03036]
    125008412 (hcfc1b)
   03029 Mitochondrial biogenesis [BR:mcep03029]
    125008412 (hcfc1b)
Protein phosphatases and associated proteins [BR:mcep01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125008412 (hcfc1b)
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     125008412 (hcfc1b)
   HMT complexes
    COMPASS/SET1 complex
     125008412 (hcfc1b)
    MLL-HCF complex
     125008412 (hcfc1b)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     125008412 (hcfc1b)
Mitochondrial biogenesis [BR:mcep03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    125008412 (hcfc1b)
SSDB
Motif
Pfam: Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 125008412
NCBI-ProteinID: XP_047441593
EnsemblRapid: ENSMGCG00000025747
LinkDB
Position
1:27208309..27222329
AA seq 1394 aa
MASEPATPAVLRPRWKRVVGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT
ATNQWFVPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLK
AKPPKNGPAPCPRLGHSFSLIGGQCFLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPATSGPAPPPRESHTAVVASGRGPNRLIIYGGMSGCRLGDLWVLDIETLVWSKPV
LGGTAPLPRSLHSATTVKNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMCW
ETVLMDTVEDNVPRARAGHCSVSINSRLFMWSGRDGYRKAWNNQVCCKDLWYLETECPCA
PSRVQLVRANTSSLEVSWGPSQTADTYLLQLQRYDVPSTPAASSPSSSAAPIPAVPVATA
PAIQSASLPGITLLPSPTAPGPGSPLAVRAPAVLKAAAAAPGAVGGASIVTVRQTTPKSQ
PIGSSPQMSGMAALAAAAAATQKIPPSTASPVTKVSNATTRMLKTAVAQVGGASLVSSPA
GTPGRPIITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLGMGRGGALIGNLGNLGN
LGKVMSVVQAKPVQAGNSPVTQILQTKASLPAGTILKLVSSADGKQTTILTSSQAGSNKP
TILGVAPATSKPGATIIKTIPMSALQGGAGGNSPITILTTKMVTSGTTGKLLTAVPKIST
GGQQGVTQVVLKGATGAPGTILRTVPVGGVRLVSPGAAGTTLVVKATTGVSTLGTGTGTV
STLARQITTATAATGPKQQVTLITTPSGAEAQDLVQDLVQDLPVSIMASPTSEEPGSTTT
TTSTSTAEGGGHSAAVTLVCSNPPCETHETGTTNTSTVSSAGMNQDLQVSSGPPICSNPP
CETHETGTTNTSTMAGAGGVHQVCSNPPCETHETGTTNTATTATAQQGGDSDSTDPASSS
DPTSSTTANQSRAITTVTQATPTPGPSIPEITSLVGADRAESSEAVAMVTSESQAEGVMS
SAQMASSEDGLPQELMSSEGDGALDQLAVTTATEEAARQSGESSMDRSIPIVLTQQEQQF
QDVHNQPEPEPEPQTSSIPTEGLAPADSLNDPAAETNEHELTSSAVTSAVARLASTFGPA
PVLKSRAAAAPPEASNGITATATAVHVKPPAKENQWFDVGIVKVTNVVVTHYYIPYDDKM
ADDDSGTVPDYSQMRRVELQPGTAYKFRVAGINICGRGSFSEVSAFKTCLPGFPGAPCAI
KISKTVGGAQLTWEPPAVTSGPITEYSVYLAIRSSQASSSSSGSGPAQLAFMRVYCGTGA
SCLVQASSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQETSKDAKPAKRPGASP
DLKPAGPKKFRTDQ
NT seq 4185 nt   +upstreamnt  +downstreamnt
atggcatcggaacccgccacccccgcggtgctccggccccgatggaagcgcgtcgtgggt
tggaccggcccggtgccgcggccccggcacggacaccgagccgtggccatcaaggagcta
atggtggtgttcggtggagggaacgaggggatcgtggacgagctgcacgtctacaacacg
gccactaatcagtggttcgtcccggcggtccgaggagacgtcccgcccggctgtgccgcc
tacggcttcgtgtgcgacgggacgaggctgctggtgttcggagggatggtggagtacggc
aaatacagcaacgacctgtacgagctgcaggccagtcgctgggagtggaagcgactgaag
gctaaacctccaaaaaacggccccgccccctgcccccgcctcggacacagcttctctctg
attggcggccagtgcttcctgttcggaggactggccaatgacagcgaagaccccaagaac
aacatccccaggtacctgaacgacctgtactgtttggagctgcgacccggctccagcgtg
gtcggctgggagatcccagcgacgtccgggccggcgccgccacccagagagagccacacg
gcggtggtggcgagtgggcgtggccccaaccggctcatcatctacggggggatgagcggc
tgcagactgggagacctctgggtcctcgacatcgagactctggtgtggagtaaacctgtc
ctcggtggaacggcccccctccctcgaagcctgcactcagccaccaccgtcaaaaacaag
atgtatgtctttggaggttgggttcctctggtgatggacgacgtcaaagtggcgactcat
gagaaggagtggaaatgtaccaacacactggcctgcctcaacctggactcgatgtgctgg
gagacggtgctgatggacacggtggaggacaacgtccccagagctcgagcgggtcactgc
agcgtcagcatcaactccagactcttcatgtggagcggcagggacggatacaggaaggcc
tggaacaaccaggtctgctgcaaggacctctggtacctggagacagagtgtccctgtgcc
ccgtcccgggtgcagctggtccgggccaacacctcgtccctggaggtgagctggggcccg
tcccagaccgcggacacgtacctgctgcagctccagagatacgacgtcccctccacacct
gcagcctcctccccctcctccagcgccgcccccatccccgccgtcccggtcgccacggcg
ccagccatccagagcgcctcgctgcctggcatcactctgctcccctcacccaccgccccc
ggtcctggaagcccattggccgtcagagctccagcggtcctgaaggcggcggcggcggct
ccgggtgcagtgggcggagcctccatcgtcacagtgaggcagaccacgcccaaatcccag
ccaatcggcagcagccctcagatgagtggcatggcggcgctggcagcggcggcggcagcg
actcagaagatccccccgtccacagcgtccccagttaccaaggtgagcaacgccaccact
cggatgttgaagacagcggtggctcaggtgggcggggcttctctggtctcctcccccgcc
gggactcctggccgaccaatcatcacggtccataagtcgggcacggtgacagtgtctcag
caggcacaggtggtcaccacggtggtgggcggagtcacaaagaccatcactctggtcaac
agtcccctgggcatgggaaggggcggggctctgattggtaaccttggtaaccttggtaac
ctggggaaggtgatgtcggtggtccaggccaaaccggtccaggctggaaacagcccagtc
acacagatcctccagacgaaggcttccctcccagcagggaccatccttaaactcgtatct
tcagctgatggtaaacagacgaccatcttgacttcatctcaggccggatccaacaaaccc
accatcctgggcgtcgccccggcaacctccaaacccggagccaccatcatcaagaccatc
ccgatgtcggccctgcaggggggagcaggtgggaatagtccgatcaccatcctgaccacc
aagatggtgacttcagggaccacaggaaaactcctcactgctgtccctaagatatctaca
ggaggccagcagggggtcacacaggtggtgctgaaaggagctacaggtgcgccaggtacg
atcctcaggaccgtcccagtgggcggagtcaggctggtgtcaccaggagctgctggaacc
acgctggttgtcaaggcaaccacaggtgtctccaccctggggacggggacagggaccgtc
tccaccctggcccgccagatcaccacggcaaccgctgccactggacccaagcagcaggtg
actctgatcacgacaccgagcggcgccgaggctcaggatctggtccaggacctggtccag
gacctgcccgtctccatcatggcctcccctacatcagaggaaccaggcagtactactact
accactagtactagtactgcagagggaggaggacactctgctgcagtgacgctggtctgc
tccaaccccccatgtgaaacccatgagaccggaaccaccaacacctccacagtgtcctca
gccggcatgaaccaggacctgcaggtgagttcaggtccccccatctgctccaacccccca
tgtgaaacccacgagaccgggaccaccaacacctccaccatggctggagccggaggcgtc
caccaggtgtgttcgaaccctccatgtgagacccacgagaccgggaccaccaacaccgcc
accacggctacagctcagcagggcggagactcagactccacagaccccgcctcctcctcc
gaccccacctcctccaccacagccaatcagagcagagctatcaccactgttacacaggcc
acgcccacacctggaccatccatacctgagatcacctcattggtcggagccgatagggcg
gagtcctcagaggccgtcgccatggtgacgtcagagagtcaagcagagggtgtgatgtca
tcagcacagatggcgtcctcagaggacggtcttccccaggagctgatgtcatcagaaggg
gacggagccttggatcagttggctgttactacagcaacagaggaggcagcgagacagagt
ggcgagtcctcgatggaccggtccattcccatcgtcctgacgcagcaggagcagcagttt
caggacgtccacaaccaaccagaaccagaaccagaaccccagaccagcagcatccccaca
gagggccttgctccggccgacagcctcaacgacccggcagcagagaccaacgagcacgag
ctgacatcatcggcggtgacgagcgctgttgcccgattggccagcacgtttggccccgcc
cccgttctgaagagtcgagcagctgcagcgccaccggaggcgagcaacggaattaccgca
acggcaacggctgtccacgtgaagccgccagcgaaggagaatcagtggttcgatgtcggc
atcgtcaaagtcaccaatgtggtggtcacgcattactacatcccctacgacgacaagatg
gccgacgacgactcgggtacggtgcccgactacagtcagatgaggagggtggagcttcag
ccggggacggcgtacaagttccgcgtggccgggatcaacatctgcggccgcgggtccttc
tctgaagtctctgcgtttaaaacgtgtctgcccgggttccctggagctccgtgcgccatc
aagatcagcaagacggtgggcggggcccagctgacctgggagcctcctgccgtcacgtcg
ggaccgatcaccgagtactcggtctacctggccatccggtccagccaggcctcctcctcc
tcctccgggtccggcccggcccagctggccttcatgagggtgtactgcggtaccggcgca
tcctgcctggtccaggcctccagtttggccaacgcccacatcgactacaccaccaagccc
gccatcatcttccgcatcgcggcccgtaaccagaagggctacgggccggccacgcaggtc
cgctggctgcaagaaaccagtaaagacgccaaaccagccaagagaccaggagcctctcca
gacctgaaacctgccggaccaaaaaagttcagaaccgaccaatag

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