Mugil cephalus (flathead mullet): 125008440
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Entry
125008440 CDS
T08342
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125008440 (sh3tc2)
Membrane trafficking [BR:
mcep04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125008440 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
TPR_2
SH3_2
SH3_1
SH3_9
TPR_7
TPR_MalT
TPR_10
TPR_5
Motif
Other DBs
NCBI-GeneID:
125008440
NCBI-ProteinID:
XP_047441643
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All DBs
Position
5:complement(17994821..18012462)
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AA seq
1588 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPLIKVCLSSFTDISPAELDALWREPPYSLGT
DEHFSGNDIMTQGAGEEEDGPVVESGEGGAEPDNYWKKKEAFLRRSTVSLGDKFSSEIVL
SFTGRRRSSVDPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTFK
TVEEIWKFSSYLSLGYVARCLENFLCDQPFWLDPELLSDLEINVTVDEEHLATLYLGLLL
QEGSFFAKALFTRREQDEDDEEQLSFKKNDLLMVKDTGQDNMWEGTMLSTGNHGLVPVNG
MQPLPYPFYQWFLRKYPGYAGCSATEKELFEHPIVTGSCVAVVDYSPVGPDELQLSQGDT
VEIQGLLIRSLGVFIGRHASTGHTGFVHRAHVKPLNTVPLDEQLVFLTEEEKASLAQVNL
CSSEPSDGSSLLERLFSSDISSVYRLDRLDETDFLYIRNRPKHDHKGLLSTRQSVMSEKS
TGTPPFQSSPRTSVSYSSPRLSFHQSHNPLPREGERLSFTLDDTFRELDEFQEDPPLFLE
ENSWDGDESELNDPTLTLLNQQHYQEDFLPLYDHQCSFLWVTFSGKTEDELSGHLESVRE
CAKRMGMHWAHRRACFLLGRLCARKLKLSQARVYYEEALSVRVESFSDTPLLVALFTNLT
AIYLKQKMTDKLPQILEKACALLLCLPCHTFTSSDEVELLQLLLRRSVVMGDKRLESRVC
YLISSLFLSLRKTDDALPFVERLQFLSVTASAAEGRPIAPLDLNWLLSWLYHRKYMPYLA
LASLSLDSRQDHSLPDAFQRIELFIRNSVRLNPSWKEGTSLLPAQIVVYLQQALAIAERG
DDKKTQRDLCMGLASIYQQYGALDKAVRCAEQAVKTGGHINEEEGFEASVQLGWLLVLTG
QADDAQNVLRPLLTSLQGTDSPTQRGVIHNLLALCLRHQSRIVEAGRHFHSALEISRESG
NQRNQALALANLGCLALDAGAPRVAERFLVRSLCLFLELWESPTDEEHVQTYLWLGRSCK
DRGKSKDSRACYEMGLLIALHAKNLHSQLVVAKVLSRLYADMLLYGQSIVYYEHCVSVSR
ELKDKKLEGEYLEILSSIYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGR
IYYLIHEDELADMYLQAAVKTALRMNDHHFAMSIYEEAGDVYFKGVRNRMASLPFYRDGS
LPFARSIKDVHSEFRLLSKLTELLMNQGEQEEALQYASLAVEVAGKTGVRVNERTAYHRL
ATVYYSLQQYEMAENYYLKSLCLCPPVLEGPLEARYYTKVYCRLGNITLHKLKDAFDAVS
YFQLALAAALEDQANPEALYVVYMKLAEIHGNHMPDAELCQVYRDRAQSLKRVLAGVESV
AVGGENVVDADTEPGQNQGKKLDADVGYSLVKRNCVFESIPEEEPTPRTCAVRGDSDDGW
RSANLRVANGKDPPHHHPDTDGPYVDASGSETASHSYSDSIFTESFDTAKEHMSDSSSST
STLQTLQNTTDGKDTDFDTDHSLPGQIPDNHRRHTDSRETDSDVQDEQNMPTEEPDAPAD
PVRKELDEAVREDEARGAAEKCKSDVGT
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctccgggagctgccggctcttgggccagatggcgtcttgttgctgcaga
ccactcctcaactcctcctgttgtggaccgctcatcaaagtctgcctctcctccttcaca
gacatctctcccgctgagctggatgccctttggagggagccaccatacagtcttggaaca
gatgagcacttctccggaaatgacatcatgacccaaggtgcaggtgaagaagaggatggt
cccgtagtggaatcaggagaaggcggagcggagcccgacaattactggaagaagaaagag
gccttccttcgtagaagcaccgtgtcactgggagacaaattctcctcagaaattgtgcta
tcgttcacggggcggaggcgctccagcgtggatcctgaccgggccctgcaggaggcgctg
cgcacacgcctccgagtcgtggagagcaacagccaggatgtgatacagctgtttaaagac
ttgtcagcgcgtctggtctctgtccacgcggagaaggatagctttgtactaacattcaag
accgtggaggaaatctggaagttttcatcgtatttatcattaggctatgtggcccgctgc
ttggagaacttcctgtgcgatcagccgttctggctggacccagagctgctcagtgacctg
gagatcaacgtgacggtggacgaggaacatcttgccaccctctacctgggacttttactc
caggaaggatctttctttgccaaagcgctattcacaagaagggagcaggacgaggacgac
gaagagcagctgtcattcaagaagaacgacctgctgatggtgaaggacacggggcaggac
aacatgtgggagggcaccatgctctccactggaaaccacggcctggtgccagtcaacggc
atgcagccgctgccctaccccttctatcagtggttcctgaggaagtacccgggctacgct
ggatgctcagcgacagaaaaggaactatttgaacatcctatcgtgacgggttcctgtgta
gcagtagtcgactacagtccagtggggccagatgagctccagctgagccaaggcgacact
gttgagatccagggtctgctgatccgaagcctgggcgttttcatagggagacacgcttcc
acaggacacactggctttgttcacagggcccatgtcaagcctctgaacaccgtaccgcta
gatgaacaattggtctttctgactgaggaggagaaggccagcctggctcaggttaatcta
tgcagctctgagccaagcgacggcagcagcctgctggagagactcttctcgtccgacatc
agctctgtgtacaggctcgacagactggacgagacagacttcctctacatcagaaaccga
ccaaagcacgatcacaagggtttactgagcacccgtcagagcgtcatgtcggaaaaaagc
acagggacgcccccgttccagtcctcccctcgaacctctgtctcatactcctcgcctcgg
ctgtccttccatcagtctcacaaccctctgccccgagagggagagcgcctgtctttcacc
ctggatgacacattcagggagctggatgagttccaggaagatccgcctctgttcttggaa
gagaacagctgggacggagacgagtctgagctcaatgacccgacgctcaccctgctcaac
cagcaacactaccaggaggacttcctgcccctttacgaccaccagtgttccttcctgtgg
gtgaccttcagcggcaagacggaggatgagctgtcggggcacctcgagagcgtcagggag
tgcgccaagagaatgggcatgcattgggcacaccggcgggcatgctttctcctgggcaga
ctgtgtgctaggaagctaaaattatcccaggcccgtgtgtactatgaggaggctttgagt
gttcgcgttgagagtttctccgacactccgctcctcgtcgctctcttcacaaacctcacc
gccatctacctgaagcaaaagatgacggacaaactgcctcaaatcctggagaaggcctgc
gccctgctcctctgccttccctgccacaccttcacgtcctcggacgaggtcgaactgctg
cagctgctcctgaggaggtcggtggtaatgggggacaagcgcctggagtctcgcgtctgc
tacctcatctccagcctcttcctgtctctgaggaagaccgacgacgcgctcccctttgtc
gagcggctccagttcctctccgtgaccgcctctgctgccgagggccgacctatcgctcct
ctggacctcaactggctcctgagctggctctatcatcgcaaatacatgccttacttagcg
ctggcttccctgagcctggactcaagacaagaccactccctccctgatgccttccagagg
atcgagctgtttatcaggaactctgttcgtctgaacccgtcctggaaagaaggaacctcc
ttactcccagctcaaattgtggtttacttgcagcaggccctggctatagctgagcggggg
gacgacaaaaagacccagagggacctctgcatgggcttggcctcgatttaccagcagtac
ggtgctctggataaagcagtgcgctgcgctgaacaagctgtgaagaccggaggccacatc
aacgaggaggagggctttgaggcttccgtgcagcttgggtggctgctggtgctgacgggg
caggcagacgatgctcagaatgtcttacgtccactgctcacatcactacagggtacagac
agtcccactcagcgaggagtgatccacaacctcttggccttgtgtctgaggcatcagagt
cgcatcgtagaggcaggcaggcatttccactccgctttggaaatctccagagaaagcggg
aaccagagaaatcaggccctggcgctggccaaccttggctgtctggcgctggacgcgggg
gcacctcgggtcgcagagcgctttctcgtcagatcgctatgcctttttctggagctgtgg
gaaagtccgacggacgaggagcacgttcagacctacctttggcttgggcgcagctgcaaa
gacagggggaagagtaaggacagcagggcatgttatgaaatggggcttctgatagcacta
catgccaaaaacctgcatagtcagttggttgtggccaaggttctgagtcgtctatatgct
gacatgctgctctatggtcagagtatcgtctactatgagcactgcgtgtcggtatccaga
gagctgaaggacaagaaactggagggagagtatctggaaatcctcagcagcatctacctc
tcactcaacaccgagaaatcatctcgtaagtcgcttgactacaccaaacagagcctgagg
atttctattgatctgggcaagagagaggaggaatccgaaacctggctgcaggtgggacgc
atctattacctcatccacgaggacgagctggctgacatgtacctgcaggcggcagtgaag
acagccctcaggatgaacgaccatcactttgcaatgagcatctacgaggaggcaggcgac
gtctactttaaaggtgtcaggaaccggatggcgtcgctgcctttctacagggatggcagt
ctgccattcgcacggagcatcaaggacgtccactcagagttccgcttgttaagtaaactg
acagagctgttgatgaaccaaggagagcaggaggaggctctgcagtacgcatcgctggca
gtcgaggtcgcaggcaaaacaggggtgcgtgtcaatgagaggacagcctaccatcggctg
gccacggtttactacagcctgcagcagtatgagatggcagaaaactattatttgaagtcc
ctgtgtctgtgtccgcctgtcctggagggccccttggaggctcgctactacactaaagta
tactgcagactgggaaacatcactctacacaagctcaaggatgcttttgatgcagtgagc
tacttccagctggctctggcggcggcacttgaggaccaagctaaccccgaggctctgtat
gtggtgtacatgaagttggccgagatccatggcaaccacatgcccgacgctgagctgtgc
caagtttacagagacagagcccagagtctgaagagagttttggccggggtggaaagcgtt
gctgttggaggggaaaacgtggtcgatgcagacactgagcctggccaaaaccagggaaag
aagttggatgccgatgtgggatatagtttggttaagagaaactgcgtttttgagtctata
cctgaagaggagccgactccaaggacttgcgcggtacgcggagattcagacgacggatgg
agaagcgctaatcttagagttgctaatgggaaagatccccctcaccatcatcctgataca
gatggcccttatgtggacgcgtctggctctgagacagccagtcattcatatagtgacagt
atttttactgagtcctttgacacagccaaggagcacatgtcagattccagcagctccact
agcactttgcaaactctccaaaatacaacagatgggaaagacactgactttgacacagac
cacagcttgcccggtcaaatacctgataatcacaggagacacacagattccagagaaact
gactccgatgttcaagatgaacaaaacatgcccacggaagaaccagacgctcccgcggac
ccagttcgaaaagagttagatgaagctgtgagggaggacgaggctcgcggcgccgcagaa
aaatgtaaatcagacgtcggcacgtag
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integrated database retrieval system
