Mugil cephalus (flathead mullet): 125008463
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Entry
125008463 CDS
T08342
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125008463 (ssrp1a)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125008463 (ssrp1a)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125008463 (ssrp1a)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125008463 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
125008463
NCBI-ProteinID:
XP_047441687
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All DBs
Position
5:complement(11319853..11332373)
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AA seq
708 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNAAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNENTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDGESD
ESFNPGEEDDDITEEYDSNASASESSDEGDDSEDESAKKKKPKKAKVVKEKKERKPRKEK
KQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWEVK
AGEAKRQYDKAKKEYKESGGGSTSTSKKESKKSGGKKDEKKRKSAAADKDRDRAGGNDSF
KSREFIETSESSSDSDHKSKSKRKKHESDDDEEEEAVSTPASSEEESD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatctatcaggaggtcaaaggctcctggaacgat
gggcggctgcgattcagcaagcagaacgttgtttataagagcagcaagacggggaaggtg
gacagcatccctgcaggcgagctcaacgcggcccagtggagacgagtttgtttgggccac
ggcatcaaactcggcaccagcacgggacacatctacaaatatgacggcttcagggacacg
gactttgagaagatttctgagtttttcaaggctaactacaaggtggagctgacggagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttctcaggcccgctgttgtcg
ttcgacgtcaacgaaaacacagcctttgagatcccgctgtccaacgtttcccagtgcgcc
acagggaagaacgaagtcaccctggagtttcaccaaaacgacgacacagaagtgtccctc
atggaggtccgattctacgtcccacccagccagtccgatgaacgacaagaccctgtagag
gcgttcgctcagaacgtgttgtctaaggctgatgtgatccaggccacaggcgacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacattcgtatctac
ccaacgttcctccacctgcatggtaagacttttgactacaagattccctacaccaccgtc
ctccgactcttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaaacagggtcagacacggtatcacttccttattctgctcttctccaag
gaagaggacatcaacctcaccctcaacatgagcgaggaggatgtggagcgtcgctttgag
ggcaaactcagtaagaacatgtccggctctctctatgagatggtcagcagagtgatgaag
gccctggtcaaccgcaagatcactgtacctggaaacttccagggccactccggggctcag
tgcatcacctgctcctacaaggcgtcttcaggcctcctctatcctctggagaggggcttc
atctacgtccacaagccgcccgttcacctgcgctttgaagagatctcctgtgtcaacttc
gccagaggcaccaccacgacgcggtcctttgacttcgagatcgagaccaagcagggaaac
cagtacacgttcagcagcatcgagagagaggagtatggcaaactttttgactttgtcaac
gccaagaagctcaacatcaagaacagagggttcaaggagaagaagggcatgaagggtaag
atcgacgagtacagcgactcggatgacgaccagcacgacgcctacttggagaggatgaag
gccgagggcaagatcagggaggaaggcaacgacagcgacgaatcggacggcgaaagtgat
gagtctttcaaccctggggaggaggatgatgacattacagaagagtacgacagcaacgcc
tcggccagcgagagcagcgatgaaggggacgacagcgaagacgagagcgccaagaagaaa
aagcccaaaaaagccaaagtggtgaaggagaaaaaagaaaggaagccacggaaagagaag
aagcagaaggataccggcggccccaagaggccgatgagcgcctacatgctttggctcaac
tccagccgcgagcgaatcaaatcggagaatcctggcatctccatcacagagatctccaag
aaggccggagagatgtggaggcagctgggcaaagacgagaaggaggagtgggaagtgaag
gcaggcgaggcgaagaggcagtacgacaaagcaaagaaagagtacaaagagagcggcgga
ggatcaacttccacctccaagaaggagagtaagaaatctggaggcaaaaaggacgagaag
aagaggaagtctgccgcagcagataaggacagggaccgggccggaggcaacgacagcttc
aagagccgagaattcatcgagaccagcgagagttcgtcagactctgatcacaagagcaag
tccaagaggaagaagcatgagtcagatgacgatgaggaagaagaagcagtgtccacacct
gccagctcagaagaagaatctgattaa
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