Mugil cephalus (flathead mullet): 125009115
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Entry
125009115 CDS
T08342
Symbol
ushbp1
Name
(RefSeq) uncharacterized protein ushbp1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcep03037
]
125009115 (ushbp1)
Cilium and associated proteins [BR:
mcep03037
]
Primary cilia and associated proteins
USH complex and associated proteins
125009115 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
RILP
Motif
Other DBs
NCBI-GeneID:
125009115
NCBI-ProteinID:
XP_047442720
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Position
6:complement(23286615..23299210)
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AA seq
696 aa
AA seq
DB search
MDPRRGRCNSLDALSVCDREVMNPSDHVTFDAEGSDPAVNLEPSPAELAQCEAEVGTLLS
IIAELNKKMGSLKAPSDPGERRLSGPSRPLVPDLLSHRVVRSSSESNAAFTAISKPPTPD
RGGGGVVWSKLQEVLSSVEDSISCRRTWAAPITASDQDRQKEHLRAAQENWVKATQILDE
MEREFGISCPLGLPKEQYQDDMVDVEKRESAALRNALQSHQEELQRAQSHVSPAEEEKKL
AGLHKAWRSGSHSPSYRPTSGALSPDWASPPYPGSPLLHRRTARALTPLSVGVDGSPLGS
VHSGSPCPSPINLESETDRLNRCIERLKARNERLTAALERRKGESEQISITVNRLESDCA
ALQKALRYCEECEEAYGELLSLYEAKKQQSIPLQTDPAEPLGDSQQADSPSAQPWKMGTE
ELSTSFSTAGDTGEAEAPSRTGQRTPEPVDREAALRQQIERLKRERAAICLPKPSPDAGH
LGGSRWGHVTKDNIKPPETKKEKASLFHELISVREEMSDLRALIRLKEKELRSLEWSLMG
QKAQEAAGVFVPENLREEAEGRGRSEQQRLCEVTARLSCDGEITDPRARPILKELQAVLQ
REQALKKRLALVQDSLNTALSDGGSHRRDNGEQIARLTQAHSKALSSYRQIRRKYREQVW
RLEQKVAAMMESQHNQSAATKAAGEGTEWRREETVL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggcggggcagatgtaacagcctggacgcactgtcagtctgtgacagggag
gtgatgaacccgagcgatcatgtgacctttgacgccgagggctccgacccggcggtcaac
ctcgagccttcccccgcagaactggctcagtgtgaggctgaagtgggaaccctgctcagc
atcatcgctgaactgaacaagaagatgggttcactaaaggcaccgagtgacccaggcgag
aggagactatcaggtccgtccaggcctctggttccagacctcctgtctcaccgtgtggtc
agaagcagctctgagagcaatgctgccttcactgccatatctaaacctccaacgccggac
cgagggggcggtggcgtcgtctggtcaaagctgcaggaggtgctgtcttcggtggaggac
tccatcagctgtcggaggacctgggccgcccccatcacagcctcagaccaggacaggcag
aaagagcacctgagagcagctcaggagaactgggttaaagccactcagatactggatgag
atggaaagagagtttgggatttcgtgcccattaggcctgccaaaggaacagtaccaggac
gacatggtggatgttgaaaaacgggagtcagctgctctgagaaacgccttacagagtcac
caggaggagctgcagagagcgcaaagccacgtgagcccggcggaggaggagaagaagctg
gccgggctacataaggcctggaggtccggcagtcactctccttcgtaccggccgacttct
ggggcccttagtccggactgggcctcccctccctaccccggttcacctttactccacaga
agaacagccagagctttgacgcctctgtctgtgggagtggatggctccccactgggctct
gttcactcaggcagtccctgtccgagccccatcaacctggagtctgagaccgatcgactg
aacagatgcatcgagaggctgaaggccagaaatgaacgtctgactgcagctctggagcga
aggaagggagagtcggagcagatcagtatcacggtgaacaggcttgagagcgactgcgcg
gccctacagaaggctctgagatactgcgaggagtgtgaggaggcctacggcgagctgctg
tcgctttacgaagccaagaaacagcaaagcattcctctgcagacagacccagcagagcca
ctcggtgacagtcagcaggccgacagcccgtcggctcagccctggaaaatgggaaccgaa
gagctgtccacctccttctccacggcaggggacacgggggaggcggaggcaccgagtcgc
acggggcagaggacacctgagccggtggaccgggaggcagctctccggcagcaaattgag
cgtctgaaaagggagcgggcggccatttgcctccctaaaccgagtccagacgctggtcat
ctgggtggatcgagatggggacatgtgaccaaagataacatcaaacctcctgagacgaag
aaggagaaggcctccctgtttcatgaactcatctcagtcagggaggagatgtcagatctg
cgagctctaatccgcctcaaggagaaagagctgaggagtttggagtggagtttaatgggc
cagaaggctcaggaagcagcgggagttttcgtcccggaaaacctcagagaggaggcggag
ggtcgcggtagatctgaacaacagaggctctgtgaggttacggcacggctcagttgtgat
ggggaaatcacggatcctcgagccaggcccattctgaaagagctgcaggctgtcctacag
agggagcaagccctgaagaagaggctggccttggtccaggactctctgaacaccgccctc
tcagacggcggctcccacaggagggacaacggagagcagatagctcggctcacgcaagcc
cacagcaaagccttgagttcgtaccggcagattcgcaggaagtatcgggagcaggtgtgg
aggctggagcagaaagtggcggccatgatggagagtcaacacaaccagagcgcagccaca
aaagctgctggggagggcacggagtggaggagggaggagactgttttataa
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