Mugil cephalus (flathead mullet): 125009383
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Entry
125009383 CDS
T08342
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03030
DNA replication
mcep03410
Base excision repair
mcep03420
Nucleotide excision repair
mcep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125009383 (rfc4)
03410 Base excision repair
125009383 (rfc4)
03420 Nucleotide excision repair
125009383 (rfc4)
03430 Mismatch repair
125009383 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125009383 (rfc4)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125009383 (rfc4)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125009383 (rfc4)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125009383 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
125009383 (rfc4)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125009383 (rfc4)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125009383 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
125009383 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_11
AAA_22
AAA_30
Gp44_lid
DUF815
AAA_24
Mg_chelatase
AAA_14
RuvB_N
AAA_19
AAA_28
SLFN-g3_helicase
Cdc6_lid
ResIII
AAA_5
DNAX_ATPase_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
125009383
NCBI-ProteinID:
XP_047443255
LinkDB
All DBs
Position
6:15154312..15160600
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGATIQTARPQKDKAGPSSEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKSLE
GADLPNLLFYGPPGTGKTSTILAAARDLYGPELYRQRVLELNASDERGIQVIRDKVKNFA
QLTVAGTRSDGKPCPPFKIVILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISRII
EPLTSRCSKFRFKPLANKIQEERLLEICDKENLKYTKESIAALVKVSEGDLRKAITFLQS
AARLNVNKEIAESSITEIAGVVPSKVIDNLLQLSLTGTFEKLDIAIRNIVDEGYAASQIL
TQLHESVIEGDLNDKQKSAITEKMAVVDKCLADGADEYLQLLSLCSVIMQQSSQN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcgactatccagacagccagacctcagaaagacaaggca
gggcccagttcagagaagaaagccaaggcaattccctgggtagagaaataccggccaaag
tgtgtggatgaggtcgcctttcaggaggaggttgtagcagtgctgaagaagtctctcgag
ggagcagatcttccaaacttgctgttctatggccccccgggaacaggaaagacctcgacc
atcttagccgctgccagagacctttatggtccagagctgtacaggcagagggtgctggag
cttaatgcctccgatgaacgaggcatccaggtcatcagagataaagtcaagaacttcgct
cagctcactgtggctgggacccgctcggacgggaagccgtgtcctccgttcaagatagtc
atccttgacgaggcggactccatgacggggccggctcaggccgccctcaggcggacgatg
gagaaggagtctcgcaccacccgcttctgtctcatctgtaactacataagcaggattatc
gaacctcttacctccagatgttccaagtttcgcttcaaacctctggccaataaaatccaa
gaagagcgcttgttagagatctgtgacaaggagaacctcaaatacaccaaagagagtata
gcagcgttggtgaaggtgtctgagggagatctacggaaagccatcacgtttctccagagc
gctgcacgtctcaacgtcaacaaagaaattgcagagagcagtatcacggaaatagctggg
gttgtcccttcgaaagtgattgacaacctgctccagctaagcctcacgggaacctttgag
aaattagacatagctatcaggaacatagtggatgaagggtacgcggcctcgcagatcctg
actcagctccacgaatctgtcatagagggagacctgaacgacaagcagaagtcggccatc
acggagaagatggcggttgtggataagtgcctggcagacggtgcagacgagtacctccag
ttgttgagcctgtgttcggtcatcatgcagcagtcatcccagaactaa
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