Mugil cephalus (flathead mullet): 125009429
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Entry
125009429 CDS
T08342
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125009429 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125009429 (rad54l)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125009429 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
125009429
NCBI-ProteinID:
XP_047443353
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Position
6:15895231..15901011
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AA seq
740 aa
AA seq
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MRRSLAPSQVAKRKQTGDSCEDDDWTCRPNKRRTSDHEKRENHISPLRKPLTQLNNRPAC
MDGEKHEAFIRSILSKPFKIPIPNYTGTLGIRALGLKRAGIRKALHDPFAEDALVLYEPP
TLSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADE
MGLGKTLQCITLLWTLLRQNPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPLAID
GGSKDEIDKQLVNFISQHGLRAPTPILIISYETFRLHAAVLHKGKVGLIICDEGHRLKNS
DNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRQTGEEKLTELIRIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLQQAKPIQTLQEGKISVSSLSSITSLKKLCNHPTLIYDKCVEGEEGFEGALDLFPPG
YNTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVEKFNNPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FALNEETTSDTHDKFRCCRCVNGREVRPPADDSDCTSDLSQWHHCYDKKGLRDQVLKSSW
DAAVSFVFHQRSHEDQKGGV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagtcttgctcctagccaggttgctaaacggaagcaaacaggagattcctgt
gaagatgatgactggacatgtagacctaacaaaagaagaacaagtgatcatgaaaagaga
gaaaaccatatttctcctttaagaaaaccactgactcagctgaacaaccggcccgcatgt
atggatggtgaaaaacatgaggcgttcattcgaagtatcctctccaagccgtttaaaatt
cctattccaaattatacaggcaccctgggaatcagggcactcggtctaaagcgtgcagga
ataaggaaagcgcttcacgatccctttgccgaggatgctttggttctttatgagcccccg
actctgagcgctcacgacctcatcaaagctgacaaagaaaaactcccagtccatgttgtt
gtggatccagttttaggaaaagtgctcagaccccatcagagagagggggtgaagttcctg
tgggagtgcgtgacgggccgacgcatcccgggatcctacggttgcatcatggctgacgaa
atgggtctggggaagaccctgcagtgcatcacgctgctgtggactttactacgtcaaaac
ccggatgcaaagccggagatagacaaggccatcgtggtttcaccctccagtctggttcgc
aactggtacaatgaagtgggaaagtggctgggggggcgcgtcacgcccctcgccatcgat
ggaggttcaaaggacgagatcgacaagcaactagtgaactttatctctcagcacggcttg
agagcaccgaccccaatcctgatcatctcctacgagacatttcgactgcacgccgcggtg
ctacacaagggcaaagtcgggctcatcatctgtgacgagggccatcgactgaagaactct
gacaaccagacgtaccaggcgctgaacgccatgagtgcccagaggagggtgctgatatcc
ggcactcccatccagaacgacctgctggagtacttcagcctggtccactttgttaacgct
gggatcctcggcacagcccaagagtttaaaaagcgatttgagcttcccatcctgaagggt
cgggacgcagacgccagtgacaaagacagacagacaggagaagaaaaactcacagagctc
atcagaattgtcaacaggtgtttgataaggagaacgtcagatatcctgtcgaagtacctt
cctgtgaaaatcgagcaggttgtttgttgccggctcactcctctgcagacagagctctat
aagcgcttcctgcaacaggccaaacccattcagacgttacaagagggcaaaataagcgtc
tcctcattgtcttctatcacgtctctcaagaaactgtgcaatcacccaactcttatttat
gacaagtgtgtggagggcgaggaaggattcgaaggcgccctggacctgtttcctcctggt
tacaacactaaagctgtggagcctcagctctctgggaaaatgctggtcctggactacatt
ctggccatgaccaggaccacgacgagtgataaggtggtgctggtctccaactacactcag
acactggatctctttgaaaagctgtgcagatcgagaagatacctctatgttcgtctggac
ggcacaatgtccatcaagaaacgggccaagattgtggaaaaattcaataatccatccaac
ccagagttcatcttcatgctgagcagcaaagcgggcggatgtggcctgaacctgatcggt
gctaatcgcttggtgatgttcgatcccgactggaacccggccaacgacgagcaggcgatg
gctcgggtgtggagagacggccagaagaagacctgctacatctacagactgctctccacg
ggaacgattgaggagaagatcctgcagagacaggcccacaagaaagccctgagtagctgt
gtggtggacgaggagcaggatgtggagcgtcacttctctctgggtgaactccgagaactg
ttcgcactcaacgaggagaccacgagcgacacccatgacaagtttcgctgttgccgctgc
gttaatggcagagaggtgcgtcctcctgcggatgactccgactgcaccagtgacctctcc
cagtggcaccactgctacgacaagaagggcctcagggaccaagtgttgaaatcctcttgg
gacgctgctgtgtcctttgtcttccaccagcgctctcacgaggaccagaagggtggagtg
tag
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