Mugil cephalus (flathead mullet): 125009450
Help
Entry
125009450 CDS
T08342
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04136
Autophagy - other
mcep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125009450 (atg4b)
04136 Autophagy - other
125009450 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcep01002
]
125009450 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125009450 (atg4b)
03029 Mitochondrial biogenesis [BR:
mcep03029
]
125009450 (atg4b)
Peptidases and inhibitors [BR:
mcep01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125009450 (atg4b)
Membrane trafficking [BR:
mcep04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125009450 (atg4b)
Mitochondrial biogenesis [BR:
mcep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125009450 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
125009450
NCBI-ProteinID:
XP_047443390
LinkDB
All DBs
Position
6:complement(12356038..12362131)
Genome browser
AA seq
397 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDDILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALMCRHLGRDWRWARGQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDAAGACSEPEGVGELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAY
IETLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDETY
HCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCKRGGLPMFELVDSQPSHM
VSVDALNLTPDFSDSDRLERFFDSEDEEFEILSLREA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgttttggagagtttgaagattttcct
gagacctcagagcctgtgtggatcttggggaaagagtacaatgcactcacagagaaagat
gatattttatcagatgtcacttcacgactgtggttcacatacagaaaaaactttccacca
attgggggaaccggaccaacctctgacacaggatggggttgtatgttacggtgcggccag
atgatcctaggcgaggctttgatgtgtagacatttaggtagagactggagatgggccaga
ggccagaaacaaagagaggagtacatcagtattctcaacgccttcattgacaaaaaagat
agctattattccatccatcaaattgctcaaatgggagtcggggagggaaagcccatcggt
cagtggtatggaccaaacacagtggcccaggttctaaagaagctggctgtgtttgataca
tggagcagattagttgtacatgtggcgatggacaacactgtggtcatcgaggagatcaag
cggctttgtatgccctggctggatgccgcgggagcctgtagtgaaccagagggagtggga
gagctcaacggctgcttagagggagcatgtgctctggctgaagaggagacggctctctgg
aaacctctggttctcctcatccccctcaggctgggcctgagtgatataaacgaggcctac
atcgaaacgctcaagcaatgcttcatgctgcctcagtccctgggtgtaattgggggaaaa
cccaacagtgcccattacttcattggttatgtcggagaggaactcatctatttagaccca
cacaccacacagcctgcagtggagccgtgtgaagacagccaggtccctgacgagacgtac
cactgtcagcacccaccgtgtcgcatgcacatctgtgagctggacccttccatcgcggcg
ggcttcttctgcagaacagaggacgagtttgatgactggtgtatgcgcataagaaggctg
tcctgcaaaagaggcggcctgcccatgtttgaactagttgacagtcagccctcccacatg
gtcagcgtggatgcccttaaccttactcctgatttctcagactcggaccggttggagcgt
ttttttgattcggaagatgaggagtttgagatcctttccctaagggaagcctga
DBGET
integrated database retrieval system
